Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_O11
(1253 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 306 4e-84
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 153 4e-38
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 146 4e-36
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 139 6e-34
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 132 1e-31
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 110 4e-25
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 104 2e-23
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 62 2e-10
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 44 3e-05
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 44 3e-05
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 29 1.8
SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyc... 27 5.4
SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces ... 27 7.2
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 7.2
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 27 7.2
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 7.2
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 26 9.5
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 306 bits (751), Expect = 4e-84
Identities = 141/239 (58%), Positives = 185/239 (77%)
Frame = +2
Query: 182 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME 361
MF+TRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+ T + VVL VEKR+TS LME
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 362 PTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLA 541
++EK+ E+D HI CA+SGL AD+RT++E ARV+ QNH F Y+E +ES Q++ +LA
Sbjct: 61 SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA 120
Query: 542 IQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQ 721
++FG+ +D MSRPFGVA++ AGIDE GPQL+H +PSGT+ +Y+AKAIGSGSE A+
Sbjct: 121 LRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKS 180
Query: 722 SLKEIYHKSMTLKEAIKSALTILKQVMEEKLSENNVEVVTMTPGSLFHMFTREQLAEVI 898
L + +HK MTL+EA L +L+QVMEEKL NV++ +T FH++ E++A+ +
Sbjct: 181 ELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEGGFHIYNDEEMADAV 239
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 153 bits (372), Expect = 4e-38
Identities = 79/217 (36%), Positives = 131/217 (60%), Gaps = 1/217 (0%)
Frame = +2
Query: 200 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEK 379
+Y + TFSP G+L Q+EYA+ A+ G T++GI ++GVVLA EK+ TS L ++EK
Sbjct: 4 KYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEK 63
Query: 380 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWF-VYNERMSVESCAQAVSNLAIQFGD 556
+ + I SG+ D R LV+++R Q + +YNE + Q ++++ +
Sbjct: 64 VCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASV---MQE 120
Query: 557 SDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEI 736
S G RPFGV+++ AG+DEKGP L+ +DPSGT+ + A AIG S A+ L++
Sbjct: 121 STQSGGV---RPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKR 177
Query: 737 YHKSMTLKEAIKSALTILKQVMEEKLSENNVEVVTMT 847
Y+ + L +A+ +A+ LK+ E +L+E+N+E+ ++
Sbjct: 178 YNDELELDDAVHTAILALKETFEGELTEDNIEIAVVS 214
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 146 bits (355), Expect = 4e-36
Identities = 79/239 (33%), Positives = 140/239 (58%), Gaps = 2/239 (0%)
Frame = +2
Query: 197 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIE 376
S YDR ++ FSP+GRL QVEY EA++ G+TAI + +E +V+ VE++ L + +
Sbjct: 2 SGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQ 61
Query: 377 KIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGD 556
KI VD H+ A +GL AD+R L+++ARVE QNH + +S+E + V+ + ++
Sbjct: 62 KIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQ 121
Query: 557 SDDDSGTAMSRPFGVAVMFAGID--EKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLK 730
S G RPFGV+ + AG D + P+++ +P+G + + A AIG S+ A++ L+
Sbjct: 122 S---GGV---RPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLE 175
Query: 731 EIYHKSMTLKEAIKSALTILKQVMEEKLSENNVEVVTMTPGSLFHMFTREQLAEVIKDI 907
+ + + ++ E I A++ L +V++ + N+E+ M PG +++ ++K+I
Sbjct: 176 KNWKEGLSRDETIHLAVSSLLEVVQ--TASGNIELAIMDPGKDVEFLHSDKIDTIVKEI 232
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 139 bits (337), Expect = 6e-34
Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 3/223 (1%)
Frame = +2
Query: 188 LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME-P 364
++RS YD FSPEGRL+QVEYA+EAI A+GI +G+VLA EK++TS L+E
Sbjct: 1 MSRS-YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQE 59
Query: 365 TTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAI 544
+ EK+ + ++ CAV+GL AD+ L+ AR Q + +NE M E + V +L
Sbjct: 60 ESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQ 119
Query: 545 QFGDSDDDSGTAMSRPFGVAVMFAGIDE-KGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQ 721
+ + RPFGV+ ++AG D +G QLF +PSG + + A +IG S Q
Sbjct: 120 GY------TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQS 173
Query: 722 SLKEIYHKSMTLKEAIKSALTILKQVME-EKLSENNVEVVTMT 847
+++ Y + L EA A+ L + ++ L+ +E T+T
Sbjct: 174 LMRQEYKDDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATIT 216
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 132 bits (318), Expect = 1e-31
Identities = 78/210 (37%), Positives = 117/210 (55%)
Frame = +2
Query: 203 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 382
YD G+ FSP+GRLFQ EYA +A++ ST IGI +GV+LA+EK +TS L++P +I
Sbjct: 8 YDLGL-FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRI 66
Query: 383 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 562
VDRHI A +G + D + +V+RAR E + Y + A + N F
Sbjct: 67 GSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLF---- 122
Query: 563 DDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYH 742
+ + RPFGV A D +GP L+ ++P+G + Y+ A G G + A+ L+++
Sbjct: 123 --TCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNF 180
Query: 743 KSMTLKEAIKSALTILKQVMEEKLSENNVE 832
S+ +K+A+K A IL +E ENN E
Sbjct: 181 SSLKMKDAVKEAARILYATHDE---ENNKE 207
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 110 bits (264), Expect = 4e-25
Identities = 70/237 (29%), Positives = 121/237 (51%), Gaps = 4/237 (1%)
Frame = +2
Query: 194 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI 373
R++YD T+SP+GRL QVEYA+EAIK GS +G+ + VL KR L +
Sbjct: 3 RNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEEL--SSYQ 60
Query: 374 EKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFG 553
+K++ +D HI A++GL D+R L + E + ++ + V + +S +A +
Sbjct: 61 KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVR---RLMSKVAEKAQ 117
Query: 554 DSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKE 733
+ + G RP+GV + G DE GP L PSG ++Y ++GS S+ A+ ++
Sbjct: 118 INTQEYG---RRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIER 174
Query: 734 IY--HKSMTLKEAIKSALTILKQVM--EEKLSENNVEVVTMTPGSLFHMFTREQLAE 892
+ +E I SAL L+ + +++L+E NV + + + ++ + E
Sbjct: 175 NLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQNDTKE 231
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 104 bits (250), Expect = 2e-23
Identities = 60/240 (25%), Positives = 118/240 (49%), Gaps = 5/240 (2%)
Frame = +2
Query: 203 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEK 379
+DR + FSPEGRL+QVEYA +A G T++G+ + +K++ L++ +T++
Sbjct: 7 FDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKH 66
Query: 380 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 559
+ + + I C ++G +AD+R V RAR E + M + A+ ++N+A
Sbjct: 67 VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIA------ 120
Query: 560 DDDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEI 736
+ A RP GVA+ +D++ GP LF +DP+G ++ Y A + G L++
Sbjct: 121 QVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKR 180
Query: 737 YHKS---MTLKEAIKSALTILKQVMEEKLSENNVEVVTMTPGSLFHMFTREQLAEVIKDI 907
+ K L + +++ + L + +++ + F + + E++ ++ I
Sbjct: 181 FKKDGIPSNLTDTVETGIQALMSSLSTDFKSTELQIGVVEDDKPFRVLSVEEIEAHLQSI 240
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 61.7 bits (143), Expect = 2e-10
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Frame = +2
Query: 281 GSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERA 457
G+T + G+V+ V+ R ++ L+ T++K++E++ ++ ++G AD +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVL 120
Query: 458 RVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGP 637
+EC+ H E +SV + ++ +SN+ + G +S + M AG + G
Sbjct: 121 GMECRLHQLRNKELISVSAASKILSNITYSY------KGYGLS----MGTMLAGTGKGGT 170
Query: 638 QLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAI 769
L+++D GT ++ D ++GSGS A L Y ++ +EA+
Sbjct: 171 ALYYIDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEAL 214
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 44.4 bits (100), Expect = 3e-05
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Frame = +2
Query: 272 IKLGSTAIGICTSEGVVLAVEKRIT-STLMEPTTIEKIVEVDRHIACAVSGLMADSRTLV 448
I++G+T + +GV+LA + R T + +K+ ++ +I C SG AD++T+
Sbjct: 21 IRMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVA 80
Query: 449 ERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDE 628
+ + + + SV + A S + Q ++ AG DE
Sbjct: 81 DLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQ-----------NKNMLSAGLIVAGYDE 129
Query: 629 K-GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIKSALTILKQVME 805
K G ++ + G+ + GSGS + ++MT +EA++ + ME
Sbjct: 130 KTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAME 189
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 44.4 bits (100), Expect = 3e-05
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Frame = +2
Query: 266 EAIKLGSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRT 442
+A G+T +G+ + +VL + R T+ ++ +K+ + +I CA +G AD+
Sbjct: 30 KATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEF 89
Query: 443 LVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGI 622
+ + H N + V + + ++ G ++ G
Sbjct: 90 VTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGH-----------IGAYLVLGGY 138
Query: 623 DEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIK 772
D KGP LF + G+ + A+GSGS A L+ Y + EA++
Sbjct: 139 DCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAME 188
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 853 SWSHCHYFNIVLRELFLHDLLQYGECRLDGL 761
++ H HY N VL +L LL Y + D L
Sbjct: 879 TYGHLHYINFVLEKLLSSSLLTYNSSQRDKL 909
>SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.1 bits (57), Expect = 5.4
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Frame = +2
Query: 566 DSGTAMSRPFGVAVMFAGIDEKGP------QLFHMDPSGTFVQYDAKAIGSGSEGAQQSL 727
D G + PF ++ G + P LF+ P+GT ++ ++ SG E Q S
Sbjct: 190 DLGYSFISPFSMSFASKGNEILDPGESTNKNLFYEFPNGTTEPFEKNSVHSGKETLQYSA 249
Query: 728 KEIYHKSM----TLKEAIKSALTILKQVMEEKLSENNVEVVTMTPGSL 859
K+M + ++L++ +Q+ E + +N + T+ P S+
Sbjct: 250 TISKWKAMIEQIIFQNDQAASLSLQQQLKNEDIEDNINLINTILPFSV 297
>SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 26.6 bits (56), Expect = 7.2
Identities = 25/81 (30%), Positives = 31/81 (38%)
Frame = -2
Query: 481 PVVLTFNSGPFN*GPGVGHQTRNGASDVSIYFNNLFDGRGFHQS*SYPLLHGQNNSLRST 302
P+ L F S F G S +S YF NLF + Y LL G+NN+ +
Sbjct: 148 PLTLRFKS-IFQSGVATQDLDVQWVSSISWYFLNLFGLKSV-----YALLLGENNAASNA 201
Query: 301 NANCSGAKFDSFYGIFHLEQP 239
A F S L QP
Sbjct: 202 TNEMGMAGFSSAAATAQLIQP 222
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -1
Query: 140 MIVLSQSLTYFNLIYITRENWKXENKNQLLRXHWGILRI 24
++V Q+ T F + R+ WK E+ +++R H+ L++
Sbjct: 175 ILVNLQTSTSFECQVLNRDLWKDESVKEVIRAHFLFLQL 213
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 907 YVFDNLSKLFPCEHV 863
Y FD++ ++ PCEHV
Sbjct: 212 YAFDDILRVLPCEHV 226
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 710 GAQQSLKEIYHKSMTLKEAIKSALTILKQVMEEK 811
G + +K+IYH +LKE S T++ + E K
Sbjct: 813 GTDKLMKKIYHCEQSLKEKTNSLETLVSEKKELK 846
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 615 ANITATPNGRDMAVPLSSSLS-PNCIAKLETA 523
+ +TATP+ + PLSS S PN I+ L T+
Sbjct: 345 STLTATPSSLENLYPLSSRRSVPNLISSLGTS 376
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,401,837
Number of Sequences: 5004
Number of extensions: 92674
Number of successful extensions: 269
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 679614876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -