Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_O11
(1253 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 311 8e-85
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 154 1e-37
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 137 2e-32
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 132 7e-31
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 114 1e-25
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 105 7e-23
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 98 1e-20
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 51 2e-06
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 42 0.001
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 41 0.002
U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta... 40 0.004
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 34 0.24
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 34 0.24
U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF026209-8|AAB71275.2| 328|Caenorhabditis elegans Seven tm rece... 29 6.9
AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical... 29 6.9
Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical pr... 29 9.1
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 311 bits (763), Expect = 8e-85
Identities = 149/223 (66%), Positives = 183/223 (82%)
Frame = +2
Query: 182 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME 361
MFLTRSEYDRGVNTFSPEGRLFQVEYAIEA+KLGST+IGI TSEGV+LA EKR TS LM
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMV 60
Query: 362 PTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLA 541
IEKI +VD+HI +GL+ADSRTLVERA++E QN WF YN ++ VE Q+V+NLA
Sbjct: 61 NDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA 120
Query: 542 IQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQ 721
+QFG DDD +MSRPFGVA++FAG+D++G +LFH+DPSGTF+ AK+IG+ S+GA+Q
Sbjct: 121 LQFG--DDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQ 178
Query: 722 SLKEIYHKSMTLKEAIKSALTILKQVMEEKLSENNVEVVTMTP 850
+LKE YH ++T+KE +K AL ILKQVMEEKL+ NVEVV + P
Sbjct: 179 NLKEQYHDALTIKEGLKMALAILKQVMEEKLNSANVEVVVIKP 221
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 154 bits (374), Expect = 1e-37
Identities = 79/217 (36%), Positives = 123/217 (56%), Gaps = 1/217 (0%)
Frame = +2
Query: 197 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIE 376
+ YDR + FSP+G LFQVEYA EA+K GSTA+G+ + +V+ VEK+ L + TI
Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIR 61
Query: 377 KIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGD 556
KI +D H+ A +GL AD+R LV+RAR+ECQ++ + ++V ++ ++N +F
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQ 121
Query: 557 SDDDSGTAMSRPFGVAVMFAGIDEKG-PQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKE 733
S RPFG++++ G D G P+LF +PSG + +Y A A G G + ++ L+E
Sbjct: 122 SPG------RRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEE 175
Query: 734 IYHKSMTLKEAIKSALTILKQVMEEKLSENNVEVVTM 844
Y + T+ EA L + N+E+ M
Sbjct: 176 QYSEENTVDEATTLKLVVKSLAQVVPPGSQNIEIAVM 212
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 137 bits (331), Expect = 2e-32
Identities = 80/217 (36%), Positives = 124/217 (57%), Gaps = 2/217 (0%)
Frame = +2
Query: 203 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI-EK 379
YD FSPEGRL+QVEYA+EAI T +GI +SEG+V+A E++ L++ + + EK
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEK 64
Query: 380 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 559
+ + +I+C V+G+ AD+ L+ R ++ Y E M VE Q V NL +
Sbjct: 65 VYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVE---QLVQNLC---NEK 118
Query: 560 DDDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEI 736
+ RPFGV++++ G D+ G QL+ DPSG + + A IGS + A LK+
Sbjct: 119 QRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQE 178
Query: 737 YHKSMTLKEAIKSALTILKQVMEEKLSENNVEVVTMT 847
Y KS L+EA + A+ +L + ++ KL+ VE+ +T
Sbjct: 179 Y-KSPNLEEAKQLAIKVLWKTLDVKLASEKVEMAVLT 214
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 132 bits (318), Expect = 7e-31
Identities = 76/230 (33%), Positives = 125/230 (54%), Gaps = 2/230 (0%)
Frame = +2
Query: 203 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 382
Y + TFSP G+L Q+EYA+ A+K G ++G+ +GVVLA E + S L + K+
Sbjct: 5 YGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATE-NVGSVLTDDQ--PKV 61
Query: 383 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 562
++ +HI C SG+ D R LV++AR + +Y E M Q V+++A +
Sbjct: 62 EQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPT---IQLVTDIAAVMQEYT 118
Query: 563 DDSGTAMSRPFGVAVMFAGIDEK--GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEI 736
G RPFG +++ AG D+ P LF DPSG + + A A+G A+ L++
Sbjct: 119 QSGGV---RPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKR 175
Query: 737 YHKSMTLKEAIKSALTILKQVMEEKLSENNVEVVTMTPGSLFHMFTREQL 886
+ +++ L + I +AL L++ + ++ENNVEV + FH T++Q+
Sbjct: 176 FSEALELDDGIHTALLTLRESFDVGMNENNVEVAVCN-STGFHRLTKQQV 224
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 114 bits (275), Expect = 1e-25
Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 5/237 (2%)
Frame = +2
Query: 194 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI 373
R++YD V +SP+GRL QVEYA+EA+K GS +GI + V+ KR + L
Sbjct: 3 RNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ-- 60
Query: 374 EKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFG 553
+K+ E+D H +++GL++D R L + EC + + Y + + ++ A+++ L +Q
Sbjct: 61 KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESM-QLKLQ-- 117
Query: 554 DSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLK- 730
++ RPFGV ++ AG D+ G + DPS V +IG+ S+ A+ L+
Sbjct: 118 ---ANTQYYGRRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLER 174
Query: 731 --EIYHKSMTLKEAIKSALTILKQVM--EEKLSENNVEVVTMTPGSLFHMFTREQLA 889
+ + KS T ++ I AL L+ + EE L+ N + + S F + Q+A
Sbjct: 175 NVDNFEKS-TPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSLLEDAQVA 230
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 105 bits (252), Expect = 7e-23
Identities = 69/240 (28%), Positives = 128/240 (53%), Gaps = 5/240 (2%)
Frame = +2
Query: 203 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGICTSEGVVLAVEKRITSTLMEPTTIEK 379
+DR + FSPEGR++QVEYA +AI + TA+ + ++ V+AV+KR+ +L+ T+
Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS 68
Query: 380 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 559
+ ++ + + C G++ D++ ++RA+ E + + M E A+ +++L +
Sbjct: 69 VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYY--- 125
Query: 560 DDDSGTAMSRPFGVAVMFAGI-DEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSL-KE 733
+ A R G A++F DEKGP+++ +DP+G + ++G A L K+
Sbjct: 126 ---TQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKK 182
Query: 734 IYHKS-MTLKEAIKSALTILKQVMEEKLSENNVEVVTMT-PGSLFHMFTREQLAEVIKDI 907
I KS +T EAI+ A+ L+ + + ++EVV +T S F T +Q+ + I
Sbjct: 183 IKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLNQI 242
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 97.9 bits (233), Expect = 1e-20
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Frame = +2
Query: 203 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 382
YD +TFSP+GR+FQVEYA +A+ T I I GVV+ +K I+S L ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 383 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 562
V+ ++ AV+G D L A E Y E M +++ A +V+
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYI------- 120
Query: 563 DDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIY 739
+SRPFG F +++ G +LF ++PSG +Y A A+G + A+ ++++
Sbjct: 121 HIHTLGISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLK 180
Query: 740 HKSMTLKEAIKSALTILKQVMEEKLSENNVEV 835
+ + + + +K A I+ V +E + NV++
Sbjct: 181 IEELDVNQLVKEAARIIMVVRDEN-KDKNVQI 211
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 50.8 bits (116), Expect = 2e-06
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = +2
Query: 314 GVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVY 490
G+++AV+ R +S + ++ KI+++ + ++G AD + C +
Sbjct: 82 GIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELRE 141
Query: 491 NERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTF 670
++V + ++ +N + G +S V M AG D+KGPQ+F +D G
Sbjct: 142 KTSITVSAASKYFANTLYGY------RGQGLS----VGSMVAGYDKKGPQIFKVDSEGDR 191
Query: 671 VQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIKSAL 781
Q ++GSGS A L Y MT EA K L
Sbjct: 192 CQLKVCSVGSGSLNAYGILDNHYKPKMTDDEARKLGL 228
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 41.5 bits (93), Expect = 0.001
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 596 GVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIKS 775
G ++ G+D GP L+ +GT + + A GSGS A L+ + MT EA K
Sbjct: 141 GAYLLIGGVDPTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKL 200
Query: 776 ALTILKQVME-EKLSENNVEVVTMTP 850
L+ M + S N++ +V + P
Sbjct: 201 VQRALEAGMHGDNASGNSLNLVIIEP 226
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 41.1 bits (92), Expect = 0.002
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Frame = +2
Query: 257 YAIEAIKLGSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMAD 433
Y E I G+T I + + GVV+ + R ++ + + KI + ++ SG AD
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 434 SRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMF 613
++ + + A+ + N+ +++ +Q + + +V+
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQ-----------LSASVLV 123
Query: 614 AGIDEK-GPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKE 763
AG DE+ G Q++ + G + + A GSGS Q L + ++TL+E
Sbjct: 124 AGWDEELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEE 174
>U55855-2|AAA98018.1| 204|Caenorhabditis elegans Proteasome beta
subunit protein 3 protein.
Length = 204
Score = 39.9 bits (89), Expect = 0.004
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 4/193 (2%)
Frame = +2
Query: 281 GSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKIV-EVDRHIACAVSGLMADSRTLVERA 457
G T + + E V +A + RI + T +K V +V + ++G +D+RT++E+
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 458 RVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKG- 634
+ N + + ++ +SNLA Q G+ + P + AG+D+
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLAYQ-----HRFGSYFTEP-----LVAGLDDTNK 117
Query: 635 PQLFHMDPSG-TFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIK-SALTILKQVMEE 808
P + MD G D A+G+G E + + ++M E + +A +IL + +
Sbjct: 118 PYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERD 177
Query: 809 KLSENNVEVVTMT 847
S V T+T
Sbjct: 178 AASGWGAVVYTIT 190
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.24
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Frame = +2
Query: 281 GSTAIGICTSEGVVLAVEKRITSTLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVER 454
G + I ++A + R+T + T EKI ++ +I SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 455 ARVECQNHWFVYNERMSVESCAQAVS-NLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEK 631
+ + F Y MSV+ CA+ +S NL + P+ + AGIDE
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYR-----------RFFPYYTGAILAGIDEH 159
Query: 632 GP-QLFHMDPSGTFVQYDAKAIGS 700
G +F DP G + A G+
Sbjct: 160 GKGAVFSYDPIGCIERLGYSASGA 183
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.24
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Frame = +2
Query: 281 GSTAIGICTSEGVVLAVEKRITSTLMEPTT--IEKIVEVDRHIACAVSGLMADSRTLVER 454
G + I ++A + R+T + T EKI ++ +I SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 455 ARVECQNHWFVYNERMSVESCAQAVS-NLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEK 631
+ + F Y MSV+ CA+ +S NL + P+ + AGIDE
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYR-----------RFFPYYTGAILAGIDEH 159
Query: 632 GP-QLFHMDPSGTFVQYDAKAIGS 700
G +F DP G + A G+
Sbjct: 160 GKGAVFSYDPIGCIERLGYSASGA 183
>U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical
protein K04C2.2 protein.
Length = 990
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 770 KSALTILKQVMEEKLSENNVEVVTMTPGSLFHMFTR 877
KS +T+L ++ +K +E + VVT SLF++ TR
Sbjct: 403 KSRITVLSALLSQKATETSQSVVTSIIDSLFYVKTR 438
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.5 bits (63), Expect = 5.2
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 158 HLEYRNSKMFLTRSEYDRGVNTFSP--EGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAV 331
H +Y+N + T+ EY++ ++ F E L V + I L A C ++ VL V
Sbjct: 1601 HPDYQNRPITYTQDEYEQRIDLFVKYFEDILSSVGHTIPVEALYMQA---C-NQNTVLRV 1656
Query: 332 EKRITSTLMEPTTIEKIVEVDRHIAC 409
+ + S L++ +I KIVE D+ C
Sbjct: 1657 LRHLDSRLLKTISI-KIVEDDQDKPC 1681
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.5 bits (63), Expect = 5.2
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 158 HLEYRNSKMFLTRSEYDRGVNTFSP--EGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAV 331
H +Y+N + T+ EY++ ++ F E L V + I L A C ++ VL V
Sbjct: 1601 HPDYQNRPITYTQDEYEQRIDLFVKYFEDILSSVGHTIPVEALYMQA---C-NQNTVLRV 1656
Query: 332 EKRITSTLMEPTTIEKIVEVDRHIAC 409
+ + S L++ +I KIVE D+ C
Sbjct: 1657 LRHLDSRLLKTISI-KIVEDDQDKPC 1681
>AF026209-8|AAB71275.2| 328|Caenorhabditis elegans Seven tm
receptor protein 134 protein.
Length = 328
Score = 29.1 bits (62), Expect = 6.9
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 568 IIVTVSKLYS*VGNGLST*FYTHTLI-VHKPVVLTFNSGPFN*GPGVGH 425
+++T S LYS V N + TH L+ + K V + N GPF PG G+
Sbjct: 41 LMITFS-LYSVVYNYVD--IITHPLVLIEKQVFVVINHGPFRYTPGFGY 86
>AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical
protein Y48G1C.7 protein.
Length = 623
Score = 29.1 bits (62), Expect = 6.9
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 581 MSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKS-MTL 757
++ FGV +M + G HM P G V+ + G+ G +L+E H++ +
Sbjct: 501 VNHTFGVEIMAGEEMDNGEMHLHMAPDGAIVEEIVEEEVIGTVGDDVNLEEEVHENEPKV 560
Query: 758 KEAIKSALTILKQVMEEK 811
K +L+QV+ E+
Sbjct: 561 YTGEKQINDVLEQVVVEE 578
>Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical
protein C13C4.5 protein.
Length = 531
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -3
Query: 441 VLESAIR--PETAQAMCRSTSTIFSMVVGSIKVEVILFSTAKTT 316
++ AIR +TAQA +S T F + VG++ + VILF + T
Sbjct: 444 LISDAIRGNEDTAQAHYKSLVTSFWLCVGTLVLSVILFGISAIT 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,488,211
Number of Sequences: 27780
Number of extensions: 535822
Number of successful extensions: 1353
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3485108972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -