Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O11
         (1253 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    26   0.79 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   3.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   4.2  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   4.2  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   5.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   5.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   5.6  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   9.7  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.8 bits (54), Expect = 0.79
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 691 HWFWQ*RCPAEFEGDLS*VNDPQRG 765
           HW W    P  FEGD+  VN  +RG
Sbjct: 209 HWHWHLVYP--FEGDIRIVNKDRRG 231


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 635 PQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIKSALTILK 793
           P+L  + PSG+ V  D+    S     Q S      KS T +E + +AL  L+
Sbjct: 373 PELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWT-QEDMDAALEALR 424


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = -1

Query: 665 YHSGPY---ETVEGLSHQCLQT*QQHQMAVTWLFHYHRHCLQTV*LSW 531
           Y++ PY    T    S QC  T  Q    ++WLF      L +V L W
Sbjct: 215 YYAYPYCYNLTPNQPSAQCEATTMQENDKMSWLFESEDVLLPSVYLRW 262


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 273 IASMAYSTWNSL-PSGLNVLTPRSYSERV 190
           ++S  +  W  L  SG+   TPRS+S RV
Sbjct: 610 LSSAVWFAWGVLLNSGIGEGTPRSFSARV 638


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -3

Query: 336 FSTAKTTPSEVQMPIAVEPSLIASMAYSTWNSLPSGLN 223
           + T +T   +V+  +A   S I       WN +P G N
Sbjct: 41  YQTLQTHMKKVREQMAGILSRIPEQGVVNWNKIPEGAN 78


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 428  PSDPKRRKRCVDLLQQSFRWSW 363
            PS P    RC  L  QS + SW
Sbjct: 1111 PSIPPEDVRCAALTSQSLQVSW 1132


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 428  PSDPKRRKRCVDLLQQSFRWSW 363
            PS P    RC  L  QS + SW
Sbjct: 1107 PSIPPEDVRCAALTSQSLQVSW 1128


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 508 YTHTLIVHKPVVLTFNSGPFN*GPGVGHQTR 416
           YT++L   KPV+   + G F  G    H+ R
Sbjct: 10  YTNSLDQSKPVMFYVHEGAFISGTSSFHEMR 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,896
Number of Sequences: 438
Number of extensions: 6595
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42862491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)