Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O09
         (1286 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425...    32   0.85 
10_06_0177 + 11500330-11500755,11500937-11501383,11501651-11501764     31   1.5  
07_03_0276 + 16166528-16166796,16166824-16167291,16168048-161684...    29   7.9  

>05_04_0288 +
           19839597-19839821,19841882-19842107,19842494-19842582,
           19845184-19845387,19845463-19845717,19845796-19846011,
           19846611-19846766,19846880-19847039,19847702-19847788,
           19847789-19847940,19848006-19848143,19848714-19848788,
           19849166-19849444
          Length = 753

 Score = 32.3 bits (70), Expect = 0.85
 Identities = 22/82 (26%), Positives = 44/82 (53%)
 Frame = +2

Query: 575 QLSQLAVQKVLSTRMKDRQKKLYYEITNKYKLNYKGFVQEVTVAAEVMMNKFSNYILKRN 754
           QL +L  +K L  +  D Q    +EI N   L+ K  + +V  +  V + + ++  +  +
Sbjct: 325 QLKELQTEKNLRLQKIDVQINCIHEICNMMSLDLKKELYDVHPSF-VELGRTTSMSISDS 383

Query: 755 TMERIAGLLLNKIKEMEETLQK 820
           T+ER+AG + +  +E ++ L+K
Sbjct: 384 TLERLAGKVHSLNQEKKQRLRK 405


>10_06_0177 + 11500330-11500755,11500937-11501383,11501651-11501764
          Length = 328

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 746 KRNTMERIAGLLLNKIKEMEETLQKSNAERCINDIVDG 859
           +R     I G  +N ++E+E+ LQ   A R I D +DG
Sbjct: 141 QRGDQASIVGGAINYVRELEQLLQTLEARRTIKDHIDG 178


>07_03_0276 +
           16166528-16166796,16166824-16167291,16168048-16168414,
           16168565-16168587,16170094-16170385
          Length = 472

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +3

Query: 405 KLPRRYPGLCMTRRRRDCTGTS 470
           KLPRR    C  RRRR C+G S
Sbjct: 408 KLPRRARSSCSLRRRRWCSGRS 429


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,041,770
Number of Sequences: 37544
Number of extensions: 462931
Number of successful extensions: 910
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4004040288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)