Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O07
         (1329 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.13 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.2  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 30.3 bits (65), Expect = 0.13
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = -1

Query: 519 PPLXRXRGPRFHXPXKXXXPXXPTPFPRAXAXXXXPAXPPXPPPXP 382
           PPL   R P F  P        P  FP        PA PP PP  P
Sbjct: 550 PPLNLLRAPFF--PLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGP 593


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 18/59 (30%), Positives = 20/59 (33%)
 Frame = +3

Query: 483 NGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGREXXXXQRAAXGPEXXKGXGGXXXXXG 659
           +G   PG GGG      P GG  G     G  R+     R   G     G GG     G
Sbjct: 207 SGGGAPGGGGGSSGGPGPGGGGGGG----GRDRDHRDRDREREGGGNGGGGGGGMQLDG 261



 Score = 24.2 bits (50), Expect = 8.7
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
 Frame = +3

Query: 498 PGXGGGGXXXXXP--QGGXXGXPKRRGXG 578
           PG GGGG     P   GG  G P   G G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +2

Query: 362 GXRXGXXGXGGGXGGXAGXXXXAXARGKGVG 454
           G   G  G GGG  G  G       RG+G G
Sbjct: 56  GYGGGDDGYGGGGRGGRGGRGGGRGRGRGRG 86



 Score = 24.6 bits (51), Expect = 6.6
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 486 GXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGRE 584
           G    G GGGG      +GG  G  + RG GR+
Sbjct: 58  GGGDDGYGGGGRGGRGGRGGGRGRGRGRG-GRD 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.151    0.515 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,863
Number of Sequences: 2352
Number of extensions: 7843
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 153688872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)