Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_O07
(1329 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 35 0.11
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 35 0.11
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.34
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.34
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.34
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 33 0.34
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.34
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.45
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.79
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.79
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.79
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 32 1.0
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.4
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 1.4
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 1.4
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 1.4
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 31 1.4
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 31 2.4
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 31 2.4
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 31 2.4
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 31 2.4
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 31 2.4
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 31 2.4
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 31 2.4
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 4.2
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 30 4.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.6
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 5.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 7.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 7.4
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 7.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 9.8
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 35.1 bits (77), Expect = 0.11
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +3
Query: 411 RGXXXGXXRGERGXGXGXRCXXXXNGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGREXX 590
RG G G G G G PG GG G GG G G G
Sbjct: 178 RGGYNGGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGG 236
Query: 591 XXQRAAXGPEXXKGXGGXXXXXGPAPXGXXXXXXPXXGGG 710
Q+ G +G GG GP P GGG
Sbjct: 237 PQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGG 276
Score = 28.7 bits (61), Expect = 9.8
Identities = 28/114 (24%), Positives = 31/114 (27%)
Frame = +3
Query: 459 GXRCXXXXNGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGREXXXXQRAAXGPEXXKGXG 638
G R G G GGGG Q G G G G + G +G G
Sbjct: 170 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGG 229
Query: 639 GXXXXXGPAPXGXXXXXXPXXGGGKXXRXXXNPXGSPXXXPXGGXXXPXXXXXG 800
G GP GGG+ G P GG P G
Sbjct: 230 GQGGWGGPQQQQGGGGWGQQGGGGQ------GGWGGPQQQQQGGWGGPQQGGGG 277
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 35.1 bits (77), Expect = 0.11
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +3
Query: 411 RGXXXGXXRGERGXGXGXRCXXXXNGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGREXX 590
RG G G G G G PG GG G GG G G G
Sbjct: 216 RGGYNGGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWGG 274
Query: 591 XXQRAAXGPEXXKGXGGXXXXXGPAPXGXXXXXXPXXGGG 710
Q+ G +G GG GP P GGG
Sbjct: 275 PQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGG 314
Score = 28.7 bits (61), Expect = 9.8
Identities = 28/114 (24%), Positives = 31/114 (27%)
Frame = +3
Query: 459 GXRCXXXXNGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGREXXXXQRAAXGPEXXKGXG 638
G R G G GGGG Q G G G G + G +G G
Sbjct: 208 GGRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGG 267
Query: 639 GXXXXXGPAPXGXXXXXXPXXGGGKXXRXXXNPXGSPXXXPXGGXXXPXXXXXG 800
G GP GGG+ G P GG P G
Sbjct: 268 GQGGWGGPQQQQGGGGWGQQGGGGQ------GGWGGPQQQQQGGWGGPQQGGGG 315
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.34
Identities = 43/177 (24%), Positives = 45/177 (25%), Gaps = 1/177 (0%)
Frame = +3
Query: 390 GXXXGVXRGXXXGXXRGERGXGXGXRCXXXXNGXXXPGXGGGGXXXXXPQ-GGXXGXPKR 566
G G G G G G G G C G G GGG P GG G
Sbjct: 137 GGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGS 196
Query: 567 RGXGREXXXXQRAAXGPEXXKGXGGXXXXXGPAPXGXXXXXXPXXGGGKXXRXXXNPXGS 746
G G A P G GG G + G P GGG G
Sbjct: 197 SGGG-------GYAVAPSGGGGCGG-----GGSSGGGGYASAPSGGGGYATSGGGGSGGY 244
Query: 747 PXXXPXGGXXXPXXXXXGXXXXFXPXGXGGXXXXXXGXXXXXGXAXXPXXGGXXXXP 917
GG G + G GG G G GG P
Sbjct: 245 ATGGSSGGGYSSGGSSGG---GYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAP 298
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.5 bits (73), Expect = 0.34
Identities = 43/177 (24%), Positives = 45/177 (25%), Gaps = 1/177 (0%)
Frame = +3
Query: 390 GXXXGVXRGXXXGXXRGERGXGXGXRCXXXXNGXXXPGXGGGGXXXXXPQ-GGXXGXPKR 566
G G G G G G G G C G G GGG P GG G
Sbjct: 137 GGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGS 196
Query: 567 RGXGREXXXXQRAAXGPEXXKGXGGXXXXXGPAPXGXXXXXXPXXGGGKXXRXXXNPXGS 746
G G A P G GG G + G P GGG G
Sbjct: 197 SGGG-------GYAVAPSGGGGCGG-----GGSSGGGGYASAPSGGGGYATSGGGGSGGY 244
Query: 747 PXXXPXGGXXXPXXXXXGXXXXFXPXGXGGXXXXXXGXXXXXGXAXXPXXGGXXXXP 917
GG G + G GG G G GG P
Sbjct: 245 ATGGSSGGGYSSGGSSGG---GYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAP 298
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = -3
Query: 706 PPXXGXXFXXXPXGAGPXXKXXPPXPFXXSGPXAALWXXXXSRPXPRLLGXPXFPP--WG 533
PP G P G P PP P G P P P PP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 532 XXXXXPPPPXPGXXXPL 482
PPPP PG P+
Sbjct: 780 FKGGPPPPPPPGMFAPM 796
Score = 32.7 bits (71), Expect = 0.60
Identities = 25/92 (27%), Positives = 28/92 (30%), Gaps = 2/92 (2%)
Frame = -3
Query: 658 PXXKXXPPXPFXXSGPXAALWXXXXSRPXPRLLGXPXFPPW--GXXXXXPPPPXPGXXXP 485
P PP S P + S P + G P PP PPPP PG P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSA---GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Query: 484 LXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXP 389
+ P P L P P P P
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 32.7 bits (71), Expect = 0.60
Identities = 21/89 (23%), Positives = 21/89 (23%)
Frame = -1
Query: 1071 PPXPXXXXPPXXPPXXXPXXXXXXPXXXXXXXPGXXXXXXXPGXXPXXXXXXGXXPPPPX 892
PP PP P P G PG P PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 891 XXXXPXPXXXTXXXXXXXPPXXPXGXSXP 805
P P PP P G P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 30.7 bits (66), Expect = 2.4
Identities = 26/102 (25%), Positives = 26/102 (25%)
Frame = -2
Query: 935 PPXXXXGGSXXPPPXGXXXXPPXXXPXXXXXXXPPXXXXXKAXXXXXXXXGXXXXAPGXX 756
P G S PP G PP P PP P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP--P 753
Query: 755 XXGGTPGVXXXPXGFXPPXXGXXXXXXPXGGXAXXXXPPTPP 630
GG P P G PP P GG PP PP
Sbjct: 754 ISGGPPPPPPPPGGCPPP-----PPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = -3
Query: 706 PPXXGXXFXXXPXGAGPXXKXXPPXPFXXSGPXAALWXXXXSRPXPRLLGXPXFPP--WG 533
PP G P G P PP P G P P P PP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 532 XXXXXPPPPXPGXXXPL 482
PPPP PG P+
Sbjct: 780 FKGGPPPPPPPGMFAPM 796
Score = 32.7 bits (71), Expect = 0.60
Identities = 25/92 (27%), Positives = 28/92 (30%), Gaps = 2/92 (2%)
Frame = -3
Query: 658 PXXKXXPPXPFXXSGPXAALWXXXXSRPXPRLLGXPXFPPW--GXXXXXPPPPXPGXXXP 485
P PP S P + S P + G P PP PPPP PG P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSA---GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Query: 484 LXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXP 389
+ P P L P P P P
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 32.7 bits (71), Expect = 0.60
Identities = 21/89 (23%), Positives = 21/89 (23%)
Frame = -1
Query: 1071 PPXPXXXXPPXXPPXXXPXXXXXXPXXXXXXXPGXXXXXXXPGXXPXXXXXXGXXPPPPX 892
PP PP P P G PG P PPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 891 XXXXPXPXXXTXXXXXXXPPXXPXGXSXP 805
P P PP P G P
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 30.7 bits (66), Expect = 2.4
Identities = 26/102 (25%), Positives = 26/102 (25%)
Frame = -2
Query: 935 PPXXXXGGSXXPPPXGXXXXPPXXXPXXXXXXXPPXXXXXKAXXXXXXXXGXXXXAPGXX 756
P G S PP G PP P PP P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP--P 753
Query: 755 XXGGTPGVXXXPXGFXPPXXGXXXXXXPXGGXAXXXXPPTPP 630
GG P P G PP P GG PP PP
Sbjct: 754 ISGGPPPPPPPPGGCPPP-----PPPPPPGGFKGGPPPPPPP 790
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 33.5 bits (73), Expect = 0.34
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = -1
Query: 570 PAFWXXPXSPLGGXXXXPPLXRXRGPR-FHXPXKXXXPXXPTPFPRAXAXXXXPAXPPXP 394
P W P PL PP R RGP F P P P P PP P
Sbjct: 26 PPDWFFP-GPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPP 84
Query: 393 PPXP 382
PP P
Sbjct: 85 PPEP 88
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.34
Identities = 23/77 (29%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Frame = -3
Query: 706 PPXXGXXFXXXPXGAGPXXKXXPPXPFXXSGPXAALWXXXXSRPXPRLLGXPXFPP--WG 533
PP G P G P PP P G P P P PP G
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Query: 532 XXXXXPPPPXPGXXXPL 482
PPPP PG P+
Sbjct: 363 FKGGPPPPPPPGMFAPM 379
Score = 32.7 bits (71), Expect = 0.60
Identities = 25/92 (27%), Positives = 28/92 (30%), Gaps = 2/92 (2%)
Frame = -3
Query: 658 PXXKXXPPXPFXXSGPXAALWXXXXSRPXPRLLGXPXFPPW--GXXXXXPPPPXPGXXXP 485
P PP S P + S P + G P PP PPPP PG P
Sbjct: 264 PKIPLPPPTKMNLSAPSTSA---GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
Query: 484 LXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXP 389
+ P P L P P P P
Sbjct: 321 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 32.7 bits (71), Expect = 0.60
Identities = 21/89 (23%), Positives = 21/89 (23%)
Frame = -1
Query: 1071 PPXPXXXXPPXXPPXXXPXXXXXXPXXXXXXXPGXXXXXXXPGXXPXXXXXXGXXPPPPX 892
PP PP P P G PG P PPPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 891 XXXXPXPXXXTXXXXXXXPPXXPXGXSXP 805
P P PP P G P
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 30.7 bits (66), Expect = 2.4
Identities = 26/102 (25%), Positives = 26/102 (25%)
Frame = -2
Query: 935 PPXXXXGGSXXPPPXGXXXXPPXXXPXXXXXXXPPXXXXXKAXXXXXXXXGXXXXAPGXX 756
P G S PP G PP P PP P
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP--P 336
Query: 755 XXGGTPGVXXXPXGFXPPXXGXXXXXXPXGGXAXXXXPPTPP 630
GG P P G PP P GG PP PP
Sbjct: 337 ISGGPPPPPPPPGGCPPP-----PPPPPPGGFKGGPPPPPPP 373
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.1 bits (72), Expect = 0.45
Identities = 28/91 (30%), Positives = 28/91 (30%)
Frame = +2
Query: 374 GXXGXGGGXGGXAGXXXXAXARGKGVGXWGXXXXXGQWXRGPRXRXRGGXXXXPPRGEXG 553
G G GGG G G G G G WG G W RG RGG G G
Sbjct: 21 GPGGWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGG-WGRG---GGRGGGDWGGNNGGGG 76
Query: 554 XXQKAGXRPGXXXXPKGRXRAXXXKRXGWXG 646
G G G R R W G
Sbjct: 77 NWGGNGGGRGDWGGNGGGGRGGGG-RGDWGG 106
Score = 29.1 bits (62), Expect = 7.4
Identities = 31/115 (26%), Positives = 32/115 (27%)
Frame = +3
Query: 402 GVXRGXXXGXXRGERGXGXGXRCXXXXNGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGR 581
G RG G G RG G NG GGG GG G G GR
Sbjct: 82 GGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNN-----DGGWGGNNGGGGGGR 136
Query: 582 EXXXXQRAAXGPEXXKGXGGXXXXXGPAPXGXXXXXXPXXGGGKXXRXXXNPXGS 746
GP G GG G G GGG R G+
Sbjct: 137 GGGGRGGDGRGPPGSNG-GGDWGGNGGGGRGGGGGRGGGGGGGAGERIAEGVLGA 190
Score = 28.7 bits (61), Expect = 9.8
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = +2
Query: 374 GXXGXGGGXGGXAGXXXXAXARGKGVGXWGXXXXXGQWXRGPRXRXRGGXXXXPPRGEXG 553
G G GG G G G G G WG G G GG G G
Sbjct: 76 GNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGN--NGGGG 133
Query: 554 XXQKAGXRPGXXXXPKG 604
+ G R G P G
Sbjct: 134 GGRGGGGRGGDGRGPPG 150
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.79
Identities = 27/118 (22%), Positives = 27/118 (22%)
Frame = -1
Query: 1083 PXXXPPXPXXXXPPXXPPXXXPXXXXXXPXXXXXXXPGXXXXXXXPGXXPXXXXXXGXXP 904
P PP P P PP P P P P G P
Sbjct: 233 PAGSPPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Query: 903 PPPXXXXXPXPXXXTXXXXXXXPPXXPXGXSXPXXXXXXGXXPXXPRXGFXRGNPXGS 730
PP P P PP G P P R R P GS
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 348
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/89 (30%), Positives = 28/89 (31%), Gaps = 4/89 (4%)
Frame = -3
Query: 664 AGPXXKXXPPXPFXXSGPXAALWXXXX----SRPXPRLLGXPXFPPWGXXXXXPPPPXPG 497
A P PP P S P A P P G P PP G PPPP G
Sbjct: 231 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGG 287
Query: 496 XXXPLXXXXXRXPXPXPLSPRXXPLXSPR 410
P P P SP L P+
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 316
Score = 29.9 bits (64), Expect = 4.2
Identities = 31/116 (26%), Positives = 32/116 (27%), Gaps = 3/116 (2%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTP---XXXPXTXXXXTXPXXXXN 347
PPPP P PL P P SP SP P P P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 346 XLXPXXXXSX*TKXXPIXPXXXXXPPPFKXGXXPXXQXFFXFWXPXYPPXXGXPPS 179
P S T P P PPP G P P P G PP+
Sbjct: 298 PPPPPPRGSPPTGSLP-PPQAGGSPPPAGTGSPPPPPR-QKRQAPERSPPTGSPPT 351
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.79
Identities = 27/118 (22%), Positives = 27/118 (22%)
Frame = -1
Query: 1083 PXXXPPXPXXXXPPXXPPXXXPXXXXXXPXXXXXXXPGXXXXXXXPGXXPXXXXXXGXXP 904
P PP P P PP P P P P G P
Sbjct: 254 PAGSPPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Query: 903 PPPXXXXXPXPXXXTXXXXXXXPPXXPXGXSXPXXXXXXGXXPXXPRXGFXRGNPXGS 730
PP P P PP G P P R R P GS
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 369
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/89 (30%), Positives = 28/89 (31%), Gaps = 4/89 (4%)
Frame = -3
Query: 664 AGPXXKXXPPXPFXXSGPXAALWXXXX----SRPXPRLLGXPXFPPWGXXXXXPPPPXPG 497
A P PP P S P A P P G P PP G PPPP G
Sbjct: 252 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGG 308
Query: 496 XXXPLXXXXXRXPXPXPLSPRXXPLXSPR 410
P P P SP L P+
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 337
Score = 29.9 bits (64), Expect = 4.2
Identities = 31/116 (26%), Positives = 32/116 (27%), Gaps = 3/116 (2%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTP---XXXPXTXXXXTXPXXXXN 347
PPPP P PL P P SP SP P P P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 346 XLXPXXXXSX*TKXXPIXPXXXXXPPPFKXGXXPXXQXFFXFWXPXYPPXXGXPPS 179
P S T P P PPP G P P P G PP+
Sbjct: 319 PPPPPPRGSPPTGSLP-PPQAGGSPPPAGTGSPPPPPR-QKRQAPERSPPTGSPPT 372
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.79
Identities = 27/118 (22%), Positives = 27/118 (22%)
Frame = -1
Query: 1083 PXXXPPXPXXXXPPXXPPXXXPXXXXXXPXXXXXXXPGXXXXXXXPGXXPXXXXXXGXXP 904
P PP P P PP P P P P G P
Sbjct: 239 PAGSPPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Query: 903 PPPXXXXXPXPXXXTXXXXXXXPPXXPXGXSXPXXXXXXGXXPXXPRXGFXRGNPXGS 730
PP P P PP G P P R R P GS
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 354
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/89 (30%), Positives = 28/89 (31%), Gaps = 4/89 (4%)
Frame = -3
Query: 664 AGPXXKXXPPXPFXXSGPXAALWXXXX----SRPXPRLLGXPXFPPWGXXXXXPPPPXPG 497
A P PP P S P A P P G P PP G PPPP G
Sbjct: 237 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGG 293
Query: 496 XXXPLXXXXXRXPXPXPLSPRXXPLXSPR 410
P P P SP L P+
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQ 322
Score = 29.9 bits (64), Expect = 4.2
Identities = 31/116 (26%), Positives = 32/116 (27%), Gaps = 3/116 (2%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTP---XXXPXTXXXXTXPXXXXN 347
PPPP P PL P P SP SP P P P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 346 XLXPXXXXSX*TKXXPIXPXXXXXPPPFKXGXXPXXQXFFXFWXPXYPPXXGXPPS 179
P S T P P PPP G P P P G PP+
Sbjct: 304 PPPPPPRGSPPTGSLP-PPQAGGSPPPAGTGSPPPPPR-QKRQAPERSPPTGSPPT 357
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 31.9 bits (69), Expect = 1.0
Identities = 24/79 (30%), Positives = 25/79 (31%), Gaps = 5/79 (6%)
Frame = -1
Query: 582 PGLXPAFWXXPXSPLGGXXXXPPLXRXRGPRFHX-----PXKXXXPXXPTPFPRAXAXXX 418
P PAF P P P R R P + P P P PR
Sbjct: 80 PCCQPAF--GPCCPATPNCCPKPCCRGRRPEYEEYEDEEGNPGGVPAPPNP-PRTCCPPP 136
Query: 417 XPAXPPXPPPXPXXPXRXP 361
PA PP PPP P P
Sbjct: 137 TPAAPPPPPPPPPPAPEAP 155
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 389 GGGXGGXAGXXXXAXARGKGVGXWGXXXXXGQWXRGPRXRXRGG 520
GGG GG G RG+G G + G++ G R GG
Sbjct: 97 GGGRGGRGGNFGDRGGRGRGAGGFRRGGEGGRFNEGERRGGFGG 140
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 1.4
Identities = 33/128 (25%), Positives = 36/128 (28%), Gaps = 12/128 (9%)
Frame = -3
Query: 736 GFXXXRXXXPPPXXGXXFXXXPXGAGPXXKXXPPXPFXXSGPXAALWXXXXSRPXPRLLG 557
G+ PPP P P PP P P + +W P R G
Sbjct: 255 GYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPP-----PSSGMWPPPPPPPPGRTPG 309
Query: 556 XPXFP------------PWGXXXXXPPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSP 413
P P P G PPPP PG P P P P P P P
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPP-PGMRYP----GGMPPPPPPRYPSAGPGMYP 364
Query: 412 RXTPXXXP 389
P P
Sbjct: 365 PPPPSRPP 372
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/91 (25%), Positives = 24/91 (26%)
Frame = -2
Query: 902 PPPXGXXXXPPXXXPXXXXXXXPPXXXXXKAXXXXXXXXGXXXXAPGXXXXGGTPGVXXX 723
PPP PP P PP + PG G P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPP--SSGMWPPPPPPPPGRTPGPPGMPGMPP-PPP 321
Query: 722 PXGFXPPXXGXXXXXXPXGGXAXXXXPPTPP 630
P F PP G P G PP PP
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
Score = 28.7 bits (61), Expect = 9.8
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -1
Query: 582 PGLXPAFWXXPXSPLGGXXXXPPLXRXRGPRFHXPXKXXXPXXPTPFPRAXAXXXXPAXP 403
PG+ P P S + PP R GP P P P P P P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGP----PGMPGMP--PPPPPSRFGPPGMGGMP 334
Query: 402 PXPPPXPXXPXRXP 361
P PPP P P
Sbjct: 335 PPPPPGMRYPGGMP 348
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.4
Identities = 33/128 (25%), Positives = 36/128 (28%), Gaps = 12/128 (9%)
Frame = -3
Query: 736 GFXXXRXXXPPPXXGXXFXXXPXGAGPXXKXXPPXPFXXSGPXAALWXXXXSRPXPRLLG 557
G+ PPP P P PP P P + +W P R G
Sbjct: 265 GYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPP-----PSSGMWPPPPPPPPGRTPG 319
Query: 556 XPXFP------------PWGXXXXXPPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSP 413
P P P G PPPP PG P P P P P P P
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPP-PGMRYP----GGMPPPPPPRYPSAGPGMYP 374
Query: 412 RXTPXXXP 389
P P
Sbjct: 375 PPPPSRPP 382
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/91 (25%), Positives = 24/91 (26%)
Frame = -2
Query: 902 PPPXGXXXXPPXXXPXXXXXXXPPXXXXXKAXXXXXXXXGXXXXAPGXXXXGGTPGVXXX 723
PPP PP P PP + PG G P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPP--SSGMWPPPPPPPPGRTPGPPGMPGMPP-PPP 331
Query: 722 PXGFXPPXXGXXXXXXPXGGXAXXXXPPTPP 630
P F PP G P G PP PP
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
Score = 28.7 bits (61), Expect = 9.8
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -1
Query: 582 PGLXPAFWXXPXSPLGGXXXXPPLXRXRGPRFHXPXKXXXPXXPTPFPRAXAXXXXPAXP 403
PG+ P P S + PP R GP P P P P P P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGP----PGMPGMP--PPPPPSRFGPPGMGGMP 344
Query: 402 PXPPPXPXXPXRXP 361
P PPP P P
Sbjct: 345 PPPPPGMRYPGGMP 358
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 31.5 bits (68), Expect = 1.4
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +3
Query: 411 RGXXXGXXRGERGXGXGXRCXXXXNGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGREXX 590
RG G G G G G PG GG G GG G G G
Sbjct: 216 RGGYNGGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGD-YGGGWGQQGGGGQGGWGG 273
Query: 591 XXQRAAXGPEXXKGXGGXXXXXGPAPXGXXXXXXPXXGGG 710
Q+ G +G GG GP P GGG
Sbjct: 274 PQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGG 313
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 31.5 bits (68), Expect = 1.4
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +3
Query: 411 RGXXXGXXRGERGXGXGXRCXXXXNGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGREXX 590
RG G G G G G PG GG G GG G G G
Sbjct: 178 RGGYNGGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGD-YGGGWGQQGGGGQGGWGG 235
Query: 591 XXQRAAXGPEXXKGXGGXXXXXGPAPXGXXXXXXPXXGGG 710
Q+ G +G GG GP P GGG
Sbjct: 236 PQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGG 275
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 31.5 bits (68), Expect = 1.4
Identities = 28/100 (28%), Positives = 30/100 (30%)
Frame = +3
Query: 411 RGXXXGXXRGERGXGXGXRCXXXXNGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGREXX 590
RG G G G G G PG GG G GG G G G
Sbjct: 216 RGGYNGGGGGGGGWG-GPAQRGGPGAYGGPGGGGQGGYGGD-YGGGWGQQGGGGQGGWGG 273
Query: 591 XXQRAAXGPEXXKGXGGXXXXXGPAPXGXXXXXXPXXGGG 710
Q+ G +G GG GP P GGG
Sbjct: 274 PQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWGGPQQGGG 313
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 31.5 bits (68), Expect = 1.4
Identities = 21/82 (25%), Positives = 26/82 (31%), Gaps = 1/82 (1%)
Frame = +3
Query: 507 GGGGXXXXXPQGGXXGXPKRRGX-GREXXXXQRAAXGPEXXKGXGGXXXXXGPAPXGXXX 683
G G +G P G G Q A GP+ G GG P P G
Sbjct: 183 GPAGAAGPDGEGAGYAEPGPAGPAGPPGPDGQPGAPGPDGQPGAGGTTSTNQPGPPGPAG 242
Query: 684 XXXPXXGGGKXXRXXXNPXGSP 749
P G+ +P G+P
Sbjct: 243 PPGPAGPAGEDAYAQPSPAGTP 264
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXPXT 383
PPPP P PL P PL PR P P P P T
Sbjct: 174 PPPPVP--PRPLRLPQTAAKGPAPLPPRGLPRTYPLDFPVDIPTT 216
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXPXT 383
PPPP P PL P PL PR P P P P T
Sbjct: 174 PPPPVP--PRPLRLPQTAAKGPAPLPPRGLPRTYPLDFPVDIPTT 216
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXPXT 383
PPPP P PL P PL PR P P P P T
Sbjct: 174 PPPPVP--PRPLRLPQTAAKGPAPLPPRGLPRTYPLDFPVDIPTT 216
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXPXT 383
PPPP P PL P PL PR P P P P T
Sbjct: 174 PPPPVP--PRPLRLPQTAAKGPAPLPPRGLPRTYPLDFPVDIPTT 216
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXPXT 383
PPPP P PL P PL PR P P P P T
Sbjct: 51 PPPPVP--PRPLRLPQTAAKGPAPLPPRGLPRTYPLDFPVDIPTT 93
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXPXT 383
PPPP P PL P PL PR P P P P T
Sbjct: 174 PPPPVP--PRPLRLPQTAAKGPAPLPPRGLPRTYPLDFPVDIPTT 216
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXPXT 383
PPPP P PL P PL PR P P P P T
Sbjct: 174 PPPPVP--PRPLRLPQTAAKGPAPLPPRGLPRTYPLDFPVDIPTT 216
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 517 PPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTPXXXPXT 383
PPPP P PL P PL PR P P P P T
Sbjct: 174 PPPPVP--PRPLRLPQTAAKGPAPLPPRGLPRTYPLDFPVDIPTT 216
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 3.2
Identities = 25/92 (27%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +2
Query: 374 GXXGXGGGXGGXA-GXXXXAXARGKGVGXWGXXXXXGQWXRGPRXRXRGGXXXXPPRGEX 550
G G GGG G G G+G G WG G W GG G
Sbjct: 44 GRPGWGGGGPGWGRGGGGSGWGGGRG-GGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGG 102
Query: 551 GXXQKAGXRPGXXXXPKGRXRAXXXKRXGWXG 646
G G R G GR + G G
Sbjct: 103 GRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.9 bits (64), Expect = 4.2
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +2
Query: 362 GXRXGXXGX-GGGXGGXAGXXXXAXARGKGVGXWGXXXXXGQWXRGPRXRXRGG 520
G R G G GGG GG G A A G G G G G G +GG
Sbjct: 58 GGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGG 111
Score = 29.9 bits (64), Expect = 4.2
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +2
Query: 362 GXRXGXXGXGGGXGGXAGXXXXAXAR-GKGVGXWGXXXXXGQWXRGPRXRXRGGXXXXPP 538
G G GGG GG G ++ G G WG GQ RGG
Sbjct: 149 GGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQ 208
Query: 539 RGEXGXXQKAGXRPG 583
G G G G
Sbjct: 209 GGWGGQGGSQGGSQG 223
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.9 bits (64), Expect = 4.2
Identities = 23/75 (30%), Positives = 24/75 (32%)
Frame = +2
Query: 389 GGGXGGXAGXXXXAXARGKGVGXWGXXXXXGQWXRGPRXRXRGGXXXXPPRGEXGXXQKA 568
GGG GG G G G G G G + G RGG P G G
Sbjct: 509 GGGYGGDMGYGAYGGGYGGGYGGPGAYGDFGAYGGGG---FRGGMRGSPRGGMGGGGGFR 565
Query: 569 GXRPGXXXXPKGRXR 613
G PG R R
Sbjct: 566 GGPPGRGGMANRRGR 580
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 5.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 453 PTPFPRAXAXXXXPAXPPXPPPXPXXPXRXP 361
P+P P + P+ PP PP P P R P
Sbjct: 227 PSPGPVDPSDEPSPSDPPGPPGPPGPPTRRP 257
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 383 GXGGGXGGXAGXXXXAXARGKGVGXWGXXXXXGQWXRGPRXRXRGG 520
G GG GG G G G G G G W G R GG
Sbjct: 213 GGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGG 258
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +1
Query: 604 PXXGXXXKKGGVGGXXXXAXPPXGXX--KXXXPXXGGXXPXGXXXTPGVPPXKXXP 765
P G GG+ G PP G + P GG P PG PP P
Sbjct: 1555 PMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGP 1610
Score = 25.8 bits (54), Expect(2) = 5.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -1
Query: 462 PXXPTPFPRAXAXXXXPAXPPXPPP 388
P P P P + P PP PPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPP 1362
Score = 21.8 bits (44), Expect(2) = 5.8
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -1
Query: 405 PPXPPPXPXXPXRXP 361
PP PPP P + P
Sbjct: 1390 PPPPPPLPSEEKKNP 1404
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -3
Query: 577 PXPRLLGXPXFPPWGXXXXXPPPPXPGXXXPLXXXXXRXPXPXPLSPRXXPLXSPRXTPX 398
P P G P PP PPPP G P P P P S PR
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTP 135
Query: 397 XXP 389
P
Sbjct: 136 VNP 138
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 7.4
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -1
Query: 462 PXXPTPFPRAXAXXXXPAXPPXPPPXP 382
P P P P P PP PPP P
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPP 522
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.4
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 426 GXXRGERGXGXGXRCXXXX-NGXXXPGXGGGGXXXXXPQGGXXGXPKRRGXGREXXXXQR 602
G G+R G R NG G GGG GG G G GR+ QR
Sbjct: 575 GRGNGQRFGGRDHRYQGGSGNGGGGNGGGGGFGGGGQRSGGGGGFQSGGGGGRQQQQQQR 634
Query: 603 A 605
A
Sbjct: 635 A 635
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 9.8
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Frame = +3
Query: 426 GXXRGERGXGXGXRCXXXXNGXXX--PGXGGGGXXXXXP-QGGXXGXPKRRGXGREXXXX 596
G G G G G C +G PG G P Q G G P + G
Sbjct: 113 GGGGGGGGGGGGCHCAAQASGCPAGPPGPPGEAGTDGEPGQAGQDGQPGQAGQADSGSSG 172
Query: 597 QRAAXGPEXXKGXGGXXXXXGPA 665
Q P G G GPA
Sbjct: 173 QACITCPAGPPGPPGPDGNAGPA 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.151 0.515
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,908,911
Number of Sequences: 27780
Number of extensions: 260188
Number of successful extensions: 1445
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3725590724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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