Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O06
         (1292 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi...    33   1.7  
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.            33   1.7  

>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
           antigen 2/type XVII collagen protein.
          Length = 1497

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 19/44 (43%), Positives = 19/44 (43%)
 Frame = -1

Query: 893 PPXPRGXXGXGFFFXPGXXXXGAXGXFLGGXPXFFFXPXGXPPP 762
           PP PRG  G G    PG    G  G FL     F F P G P P
Sbjct: 875 PPGPRGPPGEGL---PGPP--GPPGSFLSNSETFLFGPPGPPGP 913


>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
          Length = 1532

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 19/44 (43%), Positives = 19/44 (43%)
 Frame = -1

Query: 893  PPXPRGXXGXGFFFXPGXXXXGAXGXFLGGXPXFFFXPXGXPPP 762
            PP PRG  G G    PG    G  G FL     F F P G P P
Sbjct: 910  PPGPRGPPGEGL---PGPP--GPPGSFLSNSETFLFGPPGPPGP 948


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.312    0.150    0.501 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,433,122
Number of Sequences: 237096
Number of extensions: 2042545
Number of successful extensions: 2738
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2489
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18605625740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)