Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_O05
(1241 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 140 3e-34
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 140 4e-34
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 132 1e-31
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 122 1e-28
SPBC1778.09 |||GTPase activating protein |Schizosaccharomyces po... 76 1e-14
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 68 2e-12
SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomy... 57 6e-09
SPBC651.03c |gyp10||GTPase activating protein Gyp10|Schizosaccha... 53 9e-08
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 51 3e-07
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 44 4e-05
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 42 2e-04
SPAC630.05 |gyp7||GTPase activating protein Gyp7 |Schizosaccharo... 40 7e-04
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 4.1
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 27 5.4
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 27 5.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.4
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 27 7.1
SPAC3F10.06c |||initiator methionine tRNA 2'-O-ribosyl phosphate... 27 7.1
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 26 9.4
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 26 9.4
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 9.4
SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces pom... 26 9.4
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 140 bits (340), Expect = 3e-34
Identities = 75/229 (32%), Positives = 123/229 (53%), Gaps = 3/229 (1%)
Frame = +2
Query: 326 KRTNTIKRYVRKGIPSEHRPSVWMAISEADKMREQFPDLYQKILDSPFEKELVDLVKTDL 505
KR + + V+ G+P ++ VW+ S A ++ P Y+++L E E + + D+
Sbjct: 492 KRWHKFRELVKNGVPLCYKAKVWLECSGAYQLHS--PGYYEELLSRTDEVESASVAQIDM 549
Query: 506 P--RTFPDNIYFTKEANHQTHLFNILIAYAHNNRLVGYCQGLNYIAGLLLLATKSEETSF 679
RT N++F + L IL+AY+ +N +GYCQG+N I LLL SEE +F
Sbjct: 550 DINRTMAKNVFFGGKGPGIPKLRRILVAYSRHNPHIGYCQGMNVIGAFLLLLYASEEDAF 609
Query: 680 WLLKVLVEKILPD-YYTKTMDGLIVDIEVLSELVKAKVPDVHQHVINLGLPWAVITTKWF 856
++L ++E +LP Y+T + D VL VK +P+++ H+ LG+ I+ WF
Sbjct: 610 YMLMSIIENVLPPKYFTPDLMTSRADQLVLKSFVKESLPEIYSHLELLGVDLDAISFHWF 669
Query: 857 VCLFAEVLPIETVLRIWDXXFYEGSKILFRVCLTLIXASKAAIMQCNDS 1003
+ ++ + LP RI+D F +G LFRV LT++ + K I+ CN S
Sbjct: 670 LSVYTDTLPTNISFRIFDMLFCDGYVCLFRVALTILKSLKQQILACNSS 718
>SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 635
Score = 140 bits (339), Expect = 4e-34
Identities = 96/312 (30%), Positives = 154/312 (49%), Gaps = 44/312 (14%)
Frame = +2
Query: 161 FRMAHSTFSAVDEYGFERHDDF-DYESYEDFMSNYLKVLATRAQKWAALLGEG------- 316
++ +HS++ D YGF++ + F + Y + Y + L R Q+W L E
Sbjct: 225 YKPSHSSW---DIYGFKKANQFYTVDQYNTWYGPYSRYLERREQRWKLFLQENGIDYIHQ 281
Query: 317 -KSV--KRTNTIKRYVRKGIPSEHRPSVWMAISEADKMREQFPDLYQKILDSPFEKELVD 487
S+ R+ +R++RKGIP E+R + W S ++ ++ P LY+ + K+ D
Sbjct: 282 SPSIFPSRSAKTQRFIRKGIPPEYRGNAWFYYSGGYELLQRNPKLYETLWRCACIKKPSD 341
Query: 488 --LVKTDLPRTFPDNIYFTKEANHQTH-------------------LFNILIAYAHNNRL 604
L++ DL RTFPDN++F ++ H + L +L+ +A
Sbjct: 342 SDLIERDLYRTFPDNVHFRHKSKHSRNSSDASEHSSEEPDVPMISKLRRVLMTFATYLPE 401
Query: 605 VGYCQGLNYIAGLLLLATKSEETSFWLLKVLVEKILPDYYTKTMDGLIVDIEVLSELVKA 784
GYCQ LN++AG LL SEE +FW+L + K LP + ++G +D VL V+
Sbjct: 402 NGYCQSLNFLAGFFLLFM-SEEKAFWMLVITCRKYLPKMHDANLEGANIDQSVLMASVRE 460
Query: 785 KVPDVHQHV-INL-GLPW----------AVITTKWFVCLFAEVLPIETVLRIWDXXFYEG 928
+P V + +N G+P ++T WF+ F +LP ET LR+WD FYEG
Sbjct: 461 SLPAVWSRISLNFDGIPVNDIVAKLPPITLVTAAWFMSAFVGILPTETALRVWDCFFYEG 520
Query: 929 SKILFRVCLTLI 964
SK+LF L ++
Sbjct: 521 SKVLFMTALCIL 532
>SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 834
Score = 132 bits (318), Expect = 1e-31
Identities = 69/243 (28%), Positives = 132/243 (54%), Gaps = 2/243 (0%)
Frame = +2
Query: 287 QKWAALLGEGKSVKRTNTIKRYVRKGIPSEHRPSVWMAISEADKMREQFPDLYQKILD-- 460
+++ L G S+ R + + VR +P++ R +W S + R + D Y +L
Sbjct: 195 KEYFLLYGANLSLIRVSLFSKLVRIELPNKLRGEIWELTSGSMYFRLENSDEYDHLLKVY 254
Query: 461 SPFEKELVDLVKTDLPRTFPDNIYFTKEANHQTHLFNILIAYAHNNRLVGYCQGLNYIAG 640
S ++ ++ DL R+ P+ + E L N+L+A++ N+ VGYCQ +N +A
Sbjct: 255 SGQTSFSLEEIEKDLGRSLPEYPAYQNEEGINA-LRNVLVAFSWKNQEVGYCQAMNIVAA 313
Query: 641 LLLLATKSEETSFWLLKVLVEKILPDYYTKTMDGLIVDIEVLSELVKAKVPDVHQHVINL 820
LL+ E+T F+L+ + E +P YY+KTM G ++D +V LV+ +P++H H ++
Sbjct: 314 ALLIHCTEEQT-FFLMHKICEDYIPGYYSKTMYGTLIDQQVYESLVQRSMPNLHAHFVSK 372
Query: 821 GLPWAVITTKWFVCLFAEVLPIETVLRIWDXXFYEGSKILFRVCLTLIXASKAAIMQCND 1000
+ ++I+ WF+ LF +P+ R+ D F EG ++LF++ + ++ ++A IM+ +
Sbjct: 373 DIQLSIISLPWFLSLFLCTMPLPYAFRLLDFFFLEGPRVLFQIGMAILYDNEAEIMKATE 432
Query: 1001 SLL 1009
+
Sbjct: 433 DTM 435
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 122 bits (294), Expect = 1e-28
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Frame = +2
Query: 308 GEGKSVKRTNTIKRYVRKGIPSEHRPSVWMAISEADKMREQFPDLYQKILDSPFEK--EL 481
G ++ +T ++ V+ GIP+ R +W S + R + Y K +DS E
Sbjct: 198 GANFNLIQTPNFQKLVQSGIPNNLRADIWETCSGSLFPRWKSKGFYAKNIDSVINNRCEY 257
Query: 482 VDLVKTDLPRTFPDNIYFTKEANHQTHLFNILIAYAHNNRLVGYCQGLNYIAGLLLLATK 661
+ ++ DL R+ PD + T L IL+ Y+ N+ VGYCQ +N + LL+
Sbjct: 258 SEEIEKDLTRSLPDYPAYQSPTGINT-LRRILLFYSETNKEVGYCQAMNIVLAALLVYC- 315
Query: 662 SEETSFWLLKVLVEKILPDYYTKTMDGLIVDIEVLSELVKAKVPDVHQHVINLGLPWAVI 841
+EE +++L L E +P YY K + GL++D+ V +++ +P ++Q +I L + +I
Sbjct: 316 TEEQAYFLFSQLCEFYIPGYYAKIIHGLLLDLTVFEYVLEHTLPHLYQKIIELDMDLKLI 375
Query: 842 TTKWFVCLFAEVLPIETVLRIWDXXFYEGSKILFRVCLTLIXASKAAIMQCND 1000
T WF LF + ++ RI D F G ++LF+V L L + I+ D
Sbjct: 376 TINWFFSLFIKDFRLDYAFRILDCLFVNGPRVLFQVALALFKVNAQGILNATD 428
>SPBC1778.09 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 414
Score = 75.8 bits (178), Expect = 1e-14
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 9/247 (3%)
Frame = +2
Query: 278 TRAQKWAAL----LGEGK---SVKRTNTIKRYVRKGIPSEHRPSVWMAISEADKMREQFP 436
+R QKW ++ L G S ++T + KGIP R W + ++
Sbjct: 123 SRIQKWKSMCSIHLVSGNQLHSFRKTRKLILRTFKGIPDCWRSIAWWSFLVDSLPDKKLI 182
Query: 437 DLYQKILDSPFEKEL-VDLVKTDLPRTFPDNIYFTKE-ANHQTHLFNILIAYAHNNRLVG 610
D Y ++ + + ++ +DL D+PRT + F K Q LF +L A A VG
Sbjct: 183 DKYYQLNEQICDYDVQIDL---DVPRTAATHFLFRKRYIGGQRLLFRVLHAVALYIPRVG 239
Query: 611 YCQGLNYIAGLLLLATKSEETSFWLLKVLVEKILPDYYTKTMDGLIVDIEVLSELVKAKV 790
Y QG+ IA LL+ E+ ++ +L + + D ++ D L+ ++L +
Sbjct: 240 YVQGMASIAATLLIYYPEEQAFIMMVNLLENRGMGDLFSSGFDTLLKAFDMLKH--ELSF 297
Query: 791 PDVHQHVINLGLPWAVITTKWFVCLFAEVLPIETVLRIWDXXFYEGSKILFRVCLTLIXA 970
+H+ +G + T+W++ +F + +P T LRIWD F G + L+ A
Sbjct: 298 TQSGRHLAEIGAEPSAFATRWYLTVFHQCVPFHTQLRIWDLLFLLGGS--KGQTVRLLQA 355
Query: 971 SKAAIMQ 991
+ A++Q
Sbjct: 356 TSLAVIQ 362
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 68.1 bits (159), Expect = 2e-12
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Frame = +2
Query: 446 QKILDSPFEKELVDLVKTDLPRTFP-DNIYFTKEANHQTHLFNILIAYAHNNRLVGYCQG 622
+K LD F E++ ++ + P DNI A +L +L + A VGY QG
Sbjct: 650 RKDLDRTFAPEILSHFFSNRQQLEPTDNI-----AESTANLHRVLRSLAIVLPQVGYTQG 704
Query: 623 LNYIAGLLLLATKSEETSFWLLKVLVEKILPDYYTKTMDGLIVDIEVLSELVKAKVPDVH 802
+++IAG LL+ + + L+ + L + ++ M GL + + LV+ +P +
Sbjct: 705 MSWIAGALLMHLPAPQAFALLVFLFKNYHLQNIFSSEMRGLSRVLHQFTRLVEDYMPSLA 764
Query: 803 QHVINLGLPWAVITTKWFVCLFAEVLPIETVLRIWDXXFYEGSKILFRVCLTLIXASKAA 982
H + ++WF+ LFA P+E V ++D F G ILF L L+ S+ +
Sbjct: 765 IHFKRQDIKTCSYASEWFLTLFAYKFPLEVVAHLYDILFLYGPGILFNFGLALLSHSQES 824
Query: 983 IMQCN 997
+++ N
Sbjct: 825 LLKLN 829
>SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 299
Score = 56.8 bits (131), Expect = 6e-09
Identities = 47/190 (24%), Positives = 80/190 (42%)
Frame = +2
Query: 359 KGIPSEHRPSVWMAISEADKMREQFPDLYQKILDSPFEKELVDLVKTDLPRTFPDNIYFT 538
+G S RP VW + A Y + SP ++ ++ D+ RT F
Sbjct: 40 EGGNSSTRPYVWAVLLNAPPRNADEYIRYVRQGPSPMAQK----IQNDVSRTLVVESQFH 95
Query: 539 KEANHQTHLFNILIAYAHNNRLVGYCQGLNYIAGLLLLATKSEETSFWLLKVLVEKILPD 718
+ Q+ L +L AY + Y QG+N +A L A KSE +F L++ P
Sbjct: 96 SRVS-QSSLSRLLNAYVWKRGAL-YVQGMNVLASPFLYACKSENQAFQFFDRLLQNECPL 153
Query: 719 YYTKTMDGLIVDIEVLSELVKAKVPDVHQHVINLGLPWAVITTKWFVCLFAEVLPIETVL 898
Y +DG+ ++L + ++ ++ ++++ GL + + L A P+ L
Sbjct: 154 YVLPNIDGVHRGAKLLDKCLEVLDHRLYTYLLSKGLTAKIYALPSILTLSACTAPLSEAL 213
Query: 899 RIWDXXFYEG 928
IWD F G
Sbjct: 214 TIWDFLFAYG 223
>SPBC651.03c |gyp10||GTPase activating protein
Gyp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 373
Score = 52.8 bits (121), Expect = 9e-08
Identities = 37/149 (24%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
Frame = +2
Query: 551 HQTHLFNIL-IAYAHNNRLVGYCQGLNYIAGLLLLATKSEETSFWLLKVLVEKILPDYYT 727
H++ L +L + + H L Y QGL+ IA +LLL T + L++ LV L D+
Sbjct: 96 HRSQLTKLLSVVFKHYPELC-YYQGLHDIAQILLL-TLPFSHALPLMEHLVFYRLRDFML 153
Query: 728 KTMDGLIVDIEVLSELVKAKVPDVHQHVINLGLPWAVITTKWFVCLFA-EVLPIETVLRI 904
T+DG + ++++ ++KA+ P +++++I + W + FA +V I V R+
Sbjct: 154 PTLDGTVKQLQLILAVIKARDPTLYEYLIKADIQ-CYFALSWLITWFAHDVSDISVVCRL 212
Query: 905 WDXXFYEGSKILFRVCLTLIXASKAAIMQ 991
+D + C ++ ++ +I++
Sbjct: 213 FDFFISSHPLTVVYTCAQVVLDNRTSIIE 241
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 51.2 bits (117), Expect = 3e-07
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 41/260 (15%)
Frame = +2
Query: 272 LATRAQKWAALLGEGKSVKRTNTIKRYVRKGIPSEHRPSVWMAI--------SEADKMRE 427
L +R +K++ +L + N ++ GIPSEHRP VW + S + +
Sbjct: 188 LVSRIKKFSRILDA--PIVDLNALRTLAWNGIPSEHRPIVWKYLLGYLPCNASRREVTLK 245
Query: 428 QFPDLYQKILDS---------PFEKELVDLVKTDLPRTFPDNIYFTKEANHQTHLFNILI 580
+ D Y DS P ++ + + D+PRT P + + Q L IL
Sbjct: 246 RKRDEYNAAKDSCFNTNTEPPPLDQTIWRQIVLDVPRTNPSILLYQNPLT-QRMLERILY 304
Query: 581 AYAHNNRLVGYCQGLN----------------------YIAGLLLLATKS--EETSFWLL 688
+A + GY QG++ Y LL ++ E ++W L
Sbjct: 305 VWASRHPASGYVQGISDLVTPFIQVFLSEYIGDKDPMTYDIALLDETNRNDIEADAYWCL 364
Query: 689 KVLVEKILPDYYTKTMDGLIVDIEVLSELVKAKVPDVHQHVINLGLPWAVITTKWFVCLF 868
L++ I D Y G+ + L EL + +H+ G+ + + +W CL
Sbjct: 365 SKLLDGI-QDNYIHAQPGIRRQVNNLRELTLRIDEPLVKHLQMEGVDFLQFSFRWMNCLL 423
Query: 869 AEVLPIETVLRIWDXXFYEG 928
L I ++R+WD EG
Sbjct: 424 MRELSISNIIRMWDTYMAEG 443
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 44.0 bits (99), Expect = 4e-05
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Frame = +2
Query: 551 HQTHLFNILIAYAHNNRLVGYCQGLNYIAGLL--LLATKSEETSFWLLKV----LVEKIL 712
H+ IL YA N +GY QG+N I L +LAT +++L + L +++
Sbjct: 248 HREAAERILFIYAKLNPGIGYVQGMNEILAPLYYVLATDPTYENYYLCECDAFFLFTQMM 307
Query: 713 P---DYYTKTMD-----GLIVDIEVLSELVKAKVPDVHQHVINLGLPWAVITTKWFVCLF 868
D Y KT+D G+ + +E +K ++ +++ + + +WF CL
Sbjct: 308 VQVRDLYEKTLDHDSDHGIHFLMSKFTERLKKYDYELWENLEEKQIHPTYYSFRWFTCLL 367
Query: 869 AEVLPIETVLRIWD 910
++ P+ V+R+WD
Sbjct: 368 SQEFPLPDVIRLWD 381
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 41.9 bits (94), Expect = 2e-04
Identities = 53/233 (22%), Positives = 92/233 (39%), Gaps = 15/233 (6%)
Frame = +2
Query: 356 RKGIPSEHRPSVW-MAI-------------SEADKMREQFPDLYQKILDSPFEKELVDLV 493
R+GIPS R VW AI + A+ + + + +++ ++ +E V +
Sbjct: 213 RQGIPSRVRGRVWEKAIGNNLKLDYQSFFNARANAQKREAAEKAEQMNNANQFREDVCAL 272
Query: 494 KTDLPRTFPDNIYFTKEANHQTHLFNILIAYAHNNRLVGYCQGLNYIAGLLLLATKSEET 673
+ DL T P F E + L +L AY++ Y G ++I LLLL
Sbjct: 273 ELDLQSTMPHYSLFHTEGPLRRDLIGLLRAYSYYRFDTSYIPGTSFIGALLLLNMNLTSA 332
Query: 674 SFWLLKVLVEKILPDYYTKTMDGLIVDIEVLSELVKAKVPDVHQH-VINLGLPWAVITTK 850
L +L + L YT+ L + + +K P++ H +I L L
Sbjct: 333 FNCLANLLDKPFLQAVYTQDTSSLKSFYQTFLDTLKKNEPELATHLLIKLELVPDDFVYP 392
Query: 851 WFVCLFAEVLPIETVLRIWDXXFYEGSKILFRVCLTLIXASKAAIMQCNDSLL 1009
LF ++ E RI D +E ++ + + K ++ +DS L
Sbjct: 393 LLRKLFIPMVSPEIASRILDCYVFEEDSFFIQLLMAVFKLLKPKLL-VDDSRL 444
>SPAC630.05 |gyp7||GTPase activating protein Gyp7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 39.9 bits (89), Expect = 7e-04
Identities = 27/140 (19%), Positives = 60/140 (42%)
Frame = +2
Query: 500 DLPRTFPDNIYFTKEANHQTHLFNILIAYAHNNRLVGYCQGLNYIAGLLLLATKSEETSF 679
DLP P + + N + + +IL+ Y + +GY QG++ + + + +F
Sbjct: 493 DLPHPDPQSTFTGTNMNMEM-MKDILLTYNEYDTELGYVQGMSDLLAPIYVTFNDNALTF 551
Query: 680 WLLKVLVEKILPDYYTKTMDGLIVDIEVLSELVKAKVPDVHQHVINLGLPWAVITTKWFV 859
W + L+++ L + + G+ ++ L L++ P++ H+ + +
Sbjct: 552 WGMVGLMKR-LHFNFLRDQSGMHRQLDTLRLLIEFMDPELFAHLEKTDSSNLFCFFRMLL 610
Query: 860 CLFAEVLPIETVLRIWDXXF 919
F E +L++WD F
Sbjct: 611 IYFKREFDWEVLLKLWDVLF 630
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 650 LATKSEETSFWLLKVLVEKILPDYY 724
L TKSE WLLK L + P +Y
Sbjct: 342 LKTKSEFLRTWLLKALSHLVAPSFY 366
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 689 KVLVEKILPDYYTKTMDGLIVDIEVLSELVKAKVPDVHQ 805
K++ EK+L + TKT + L++ L ++KA V + +
Sbjct: 1539 KLIDEKLLQYFSTKTKNSLLIIESSLPHILKANVKQIEE 1577
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 5.4
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +1
Query: 787 STRCASACYKFR-SPVGRYNNEMVCLPLCGSPTNRNRIADLGXXVL*GFKNTIPCMFNT 960
S RC+ R SP N +PLCGSP N++R A + NT N+
Sbjct: 46 SKRCSPKSSFIRNSPKIDVVNTDWSIPLCGSPRNKSRPASRSDRFIPSRPNTANAFVNS 104
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.1 bits (57), Expect = 5.4
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -3
Query: 801 CTSGTLALTNSERTSISTIRPSIVLV**SGRIFSTSTFSSQNDVSSLLVASNSKPA 634
CT T +L+ S S ++I PS++ S F TS+ S+ + SS +S+S P+
Sbjct: 114 CTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSS---SSSSSPS 166
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 206 FERHDDFDYESYEDFMSNYLKVLATRAQKWAALL 307
F D DY S E+F+ +L +LA + A LL
Sbjct: 253 FANIDFGDYSSSEEFLKEHLNILADEEESDAILL 286
>SPAC3F10.06c |||initiator methionine tRNA 2'-O-ribosyl phosphate
transferase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 453
Score = 26.6 bits (56), Expect = 7.1
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -2
Query: 607 DKSVVVSIGNQNVEQMCLMVCLLCKIYIIGKG--SRQVCFN*IHKLLFKWTV*YFLIQIR 434
D +V GN CL + +LC Y + + + + L K TV FL++I
Sbjct: 365 DAIFIVDEGNAKEAASCLALMILCLYYDLHMHLLAHPISLSASQSHLTKQTVRQFLVKIT 424
Query: 433 ELFS 422
EL S
Sbjct: 425 ELHS 428
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 233 ESYEDFMSNYLKVLATRAQKWAALLGEGKSVKRTNTIKRYVRKGI 367
E ++ LKVLAT W +L + V + N +K + +G+
Sbjct: 56 EGLQNLAEEKLKVLATLVSWWPEILQQFSVVFQGNELKDFESEGV 100
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 218 DDFDYESYEDFMSNYLKVLATRAQKWAALLGEGKSVKRTNTIKRYV 355
D FDY E+ ++ Y +Q + A LGE K K N Y+
Sbjct: 72 DSFDYAFAENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYI 117
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 631 VIKTLAIPDKSVVVSIGNQNVEQMCLMV 548
++KTL I D S ++ +N + +CL++
Sbjct: 606 MLKTLTILDYSTIIRTKEENAKLLCLLI 633
>SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 9.4
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 602 LVGYCQGLNYIAGLLLLATKSEETSF-WLLKVLVEKILPDYYTKTMDGLIVDIEVLSELV 778
L+GYCQ L +A LL +S F + LK L ++ L + + L + E ++
Sbjct: 77 LIGYCQSLRGLAYYLLEQYQSSAICFGFALKHLKKEDLTKWQVQLDSMLTIVHEQQNQDT 136
Query: 779 KAKVPD 796
+ +PD
Sbjct: 137 SSLIPD 142
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,303,503
Number of Sequences: 5004
Number of extensions: 88748
Number of successful extensions: 231
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 675349698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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