Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_O04
(1230 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 55 2e-08
SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces pomb... 54 4e-08
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 47 6e-06
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 46 1e-05
SPAC17G8.10c |dma1||mitotic spindle checkpoint protein Dma1|Schi... 43 8e-05
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 43 1e-04
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 42 2e-04
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 42 2e-04
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 41 3e-04
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 41 4e-04
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 40 5e-04
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 39 0.002
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 38 0.002
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 38 0.003
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 35 0.020
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 35 0.020
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 35 0.027
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 35 0.027
SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces pomb... 34 0.046
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 33 0.061
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.081
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 33 0.081
SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3 |Schi... 32 0.19
SPAC23H4.18c |rbx1|pip1, pip1|RING-box protein 1|Schizosaccharom... 32 0.19
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 31 0.25
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 31 0.33
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.33
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.76
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 1.00
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 29 1.3
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 29 1.7
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 29 1.7
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 2.3
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.3
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 28 2.3
SPAC1705.03c ||SPAC23H4.19|conserved fungal family|Schizosacchar... 28 3.1
SPAC343.03 |apc11||anaphase-promoting complex subunit Apc11|Schi... 28 3.1
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 27 4.0
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 5.3
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 26 9.3
SPBC13G1.01c |nam9||mitochondrial ribosomal protein subunit S4|S... 26 9.3
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 26 9.3
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 55.2 bits (127), Expect = 2e-08
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 762 ECSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQEKQTCPNCR 890
EC+IC E+ + +++ LPC H FH CI PWL+ TC CR
Sbjct: 395 ECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICR 437
>SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 54.0 bits (124), Expect = 4e-08
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 699 EDSQINRLRDEHFRKRSWSLEECSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQE-KQT 875
++ ++ L DE R+ ++ +E C IC E K +++ LPC H FH CI W+ + +
Sbjct: 300 QNGELVPLMDESTRRATFGVE-CVICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHA 358
Query: 876 CPNCRKD 896
CP C +
Sbjct: 359 CPTCNTE 365
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 46.8 bits (106), Expect = 6e-06
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 765 CSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQE-KQTCPNCRKD 896
C IC+ D L LPC H FH+QCI W+ K +CP C +D
Sbjct: 205 CIICYADYAFDDILRVLPCEHVFHTQCIDTWMTTMKASCPLCNED 249
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 765 CSICFEIMLKDQELMX--LPCTHNFHSQCIMPWLQEKQTCPNCRKD 896
C IC++ M ++ E +PC H F C+ WL+ TCP CRK+
Sbjct: 107 CPICYDDMNENDEKQATKMPCGHIFGKNCLQKWLENHCTCPLCRKE 152
>SPAC17G8.10c |dma1||mitotic spindle checkpoint protein
Dma1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 43.2 bits (97), Expect = 8e-05
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 762 ECSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQEKQ---TCPNCRK 893
EC IC +L Q L PC+H++H +CI P L E +C CRK
Sbjct: 191 ECCICLMPVLPCQALFVAPCSHSYHYKCIRPTLNESHPYFSCFICRK 237
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 729 EHFRKRSWSLEECSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQEKQTCPNCRK 893
E F+K +LE C IC E + Q C H + +C++ WL+E ++CP CR+
Sbjct: 74 ETFQKIKKTLE-CPICTEAL---QRPFTTHCGHTYCYECLLNWLKESKSCPTCRQ 124
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 41.9 bits (94), Expect = 2e-04
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 786 MLKDQELMXLPCTHNFHSQCIMPWLQEKQTCPNCR 890
M+ + M PC H +H QC++ W++ + CP CR
Sbjct: 636 MMVRRNYMLTPCHHLYHRQCLLQWMETRSICPVCR 670
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 41.9 bits (94), Expect = 2e-04
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 813 LPCTHNFHSQCIMPWLQEKQTCPNCRK 893
LPC H H C+ WL+ +QTCP CR+
Sbjct: 326 LPCGHILHFHCLRNWLERQQTCPICRR 352
>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 486
Score = 41.1 bits (92), Expect = 3e-04
Identities = 24/63 (38%), Positives = 29/63 (46%)
Frame = +3
Query: 762 ECSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKEVKSADWI 941
EC ICF ML D + PC H F C+M L + CP CR S V+ E + I
Sbjct: 168 ECQICFG-MLYDPVVS--PCGHTFCGPCLMQALTQSPQCPTCRFGLPSPVVLEHAKSHSI 224
Query: 942 XVF 950
F
Sbjct: 225 TTF 227
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 40.7 bits (91), Expect = 4e-04
Identities = 16/67 (23%), Positives = 24/67 (35%)
Frame = +3
Query: 750 WSLEECSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKEVKS 929
W L + +PC H FH+ C+ W + TCP CR + + E
Sbjct: 33 WDSSSVPASISSTLDGLRIAKIPCGHYFHNHCLESWCRVANTCPLCRTEFLKVDVLEFVK 92
Query: 930 ADWIXVF 950
W +
Sbjct: 93 GPWYRAY 99
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 40.3 bits (90), Expect = 5e-04
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = +3
Query: 756 LEECSICFEIMLKDQELMXL---PCTHNFHSQCIMPWLQEKQT--CPNCR 890
+EEC+IC+ ++ ++ L C H FH+ C+ W + + CP CR
Sbjct: 1555 VEECAICYSVLSVERTLPNKRCGTCRHKFHASCLYKWFKSSNSSRCPLCR 1604
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 759 EECSICFE-IMLKDQELMXLPCTHNFHSQCIMPWLQEKQ-TCPNCR 890
E C +C L D+ C H FH +CI WL Q +CP CR
Sbjct: 523 ERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCR 568
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 702 DSQINRLRDEHFRKRSWSLEECSICFEIMLKDQELMX-LPCTHNFHSQCIMPW-LQEKQT 875
D Q N + + + EC+IC ++ L LPC H FH CI P+ L+
Sbjct: 477 DGQGNVVTTAERGSKYFDQRECTICLCEYSEESPLYRELPCHHIFHPACIDPYLLKNSDL 536
Query: 876 CPNCRK 893
CP C++
Sbjct: 537 CPLCKQ 542
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 37.9 bits (84), Expect = 0.003
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 765 CSICFEIMLKDQE-LMXLPCTHNFHSQCIMPWLQEKQTCPNCRK 893
C IC E M +E ++ L C+H H +C +++ CP C K
Sbjct: 271 CPICGEYMFNSRERVIFLSCSHPLHQRCHEEYIRTNYRCPTCYK 314
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 35.1 bits (77), Expect = 0.020
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 225 SYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQ--DMSNTEDTHSPSNN 386
S + + S+ +TS E S +S SSC S+S S S D+ ++SN + +SP+ N
Sbjct: 243 STTQVHTESSYETSSSEQSDDSSSSSSCISDSEESSSDDELNELSNEKKANSPTQN 298
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 35.1 bits (77), Expect = 0.020
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 753 SLEECSICFEIMLKDQELMXLP-CTHNFHSQCIMPWLQE-KQTCPNCR 890
S + C IC E L C H FH CI WL +CP CR
Sbjct: 762 SADSCLICLETYTNGDICRKLQACKHFFHQACIDQWLTTGNNSCPLCR 809
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 34.7 bits (76), Expect = 0.027
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 729 EHFRKRSWSLEECSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQEKQTCPNCR 890
EH ++ S + C IC +I+ ++ C H + S C+ WL+ +CP C+
Sbjct: 1080 EHIVLKAESHQICIICRDII---KQGFITTCGHLYCSFCLEAWLKHSSSCPMCK 1130
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 34.7 bits (76), Expect = 0.027
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 756 LEECSICFEIMLKD-QELMXLPCTHNFHSQCIMPWLQEKQTCPNCR 890
L C +C E M L+ + C H FH C+ W +CP CR
Sbjct: 205 LPTCVVCLERMDSSITGLITIVCQHTFHCPCLQKW--GNSSCPVCR 248
>SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 33.9 bits (74), Expect = 0.046
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 765 CSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQEKQTCPNCR 890
C IC E + + C+H F S CI +L+E CP CR
Sbjct: 29 CLICHEYF---RAPLITSCSHTFCSFCIRDYLREHPMCPACR 67
>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 268
Score = 33.5 bits (73), Expect = 0.061
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 762 ECSICFEIMLKDQELMXL-PCTHN-FHSQCIMPWLQEKQTCPNCRK 893
+C IC + KD L PC H+ F CI W+ + TCP C++
Sbjct: 20 DCVICLQ---KDGLRAQLSPCGHDQFDYSCICRWMDQSLTCPICKR 62
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 33.1 bits (72), Expect = 0.081
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 219 SDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTRG 398
SDS S S + +S DS D+S S SES +S S++ D+ S S+++
Sbjct: 259 SDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGN 318
Query: 399 S 401
S
Sbjct: 319 S 319
Score = 32.3 bits (70), Expect = 0.14
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 216 DSDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVS-SDQDMSNTEDTHSPSNNDT 392
D+DS S+ S+ + +S EDS +S S SES++ S S S++E S +ND+
Sbjct: 125 DNDSSSSSSDSESESSS--EDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDS 182
Query: 393 RGS 401
S
Sbjct: 183 SSS 185
Score = 32.3 bits (70), Expect = 0.14
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 216 DSDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVS-SDQDMSNTEDTHSPSNNDT 392
D+DS S+ S+ + +S EDS +S S SES++ S S S++E S +ND+
Sbjct: 179 DNDSSSSSSDSESESSS--EDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDS 236
Query: 393 RGS 401
S
Sbjct: 237 SSS 239
Score = 31.9 bits (69), Expect = 0.19
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 216 DSDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDM-SNTEDTHSPSNNDT 392
+SDS S+ SE S+ D S S SS ++S SSD + S++E + S S++ +
Sbjct: 111 ESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSS 170
Query: 393 RGS 401
S
Sbjct: 171 SES 173
Score = 31.9 bits (69), Expect = 0.19
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 216 DSDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVS-SDQDMSNTEDTHSPSNNDT 392
D+DS S+ S+ + +S EDS +S S SES++ S S + S++ED S ++D+
Sbjct: 233 DNDSSSSSSDSESESSS--EDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDS 290
Score = 30.7 bits (66), Expect = 0.43
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 216 DSDSYSTISEHSTSDTSIIEDSMPDTSISS--CRSESTNSVSSDQDMSNTEDTHS 374
DSDS S+ S+ +S +S +S DT+ S STNS SS++ S ++ S
Sbjct: 298 DSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSS 352
Score = 27.5 bits (58), Expect = 4.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 225 SYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTRGS 401
S S+ S S+ S ED+ +S S SES +S SD S+++ S+ D+ S
Sbjct: 216 SDSSSSSSSSESESSSEDNDSSSSSSDSESES-SSEDSDSSSSSSDSESESSSKDSDSS 273
Score = 26.6 bits (56), Expect = 7.0
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 225 SYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTRGS 401
S S+ S S+ S ED+ +S S SES++ S S+ ++ S S S
Sbjct: 162 SDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSS 220
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 246 HSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTRGS 401
HS+S+ S S ++ SS SES +S +D S+++ S+ D+ S
Sbjct: 97 HSSSEASGSGSSSDESDSSSSESES-SSEDNDSSSSSSDSESESSSEDSDSS 147
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 33.1 bits (72), Expect = 0.081
Identities = 16/79 (20%), Positives = 37/79 (46%)
Frame = +3
Query: 612 IDVPFEERRSPLMMFFSGLTHMISPRRKAEDSQINRLRDEHFRKRSWSLEECSICFEIML 791
I + F +R + +GL + R+K ED +++ + +++ + + C++C E+
Sbjct: 376 ISLSFSKRTTKRQFPETGLGRQGAIRQKKEDVVASQVGHQFVQRQFYQIMRCAVCAELFS 435
Query: 792 KDQELMXLPCTHNFHSQCI 848
L C+ H +C+
Sbjct: 436 YSPGLQCENCSFVCHKKCV 454
>SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 31.9 bits (69), Expect = 0.19
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 762 ECSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQEKQTCPNCRK-DA*SKVI 914
+CS+C E + C H F CI W +K CP CR + SK+I
Sbjct: 255 KCSLCMEFIHCPAAT---ECGHIFCWSCINGWTSKKSECPLCRAFSSPSKII 303
>SPAC23H4.18c |rbx1|pip1, pip1|RING-box protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 107
Score = 31.9 bits (69), Expect = 0.19
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 819 CTHNFHSQCIMPWLQEKQTCP 881
C H FH CI WL + CP
Sbjct: 74 CNHAFHFHCISRWLNTRNVCP 94
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 31.5 bits (68), Expect = 0.25
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 261 TSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHS-PSNNDT 392
TS ++S P S SS SES++SVS D+S+T D+ S ++DT
Sbjct: 254 TSQSKNSTPSESDSSS-SESSSSVSDSSDLSSTSDSSSGDESSDT 297
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 31.1 bits (67), Expect = 0.33
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 693 KAEDSQINRLRDEHFRKRSWSLEECSICFEIMLKDQELMXLPCTHNFHSQCIMPWLQEK- 869
K E IN+ + + + +CS+C K + + C H F S C+ P+ + K
Sbjct: 615 KKESHLINQAYETQEAQVYKGMLKCSVCNFSNWKSKLIPN--CGHAFCSNCMEPFYEHKT 672
Query: 870 QTCPNC 887
TCP C
Sbjct: 673 STCPQC 678
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.1 bits (67), Expect = 0.33
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +3
Query: 219 SDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTRG 398
S +Y+T S S+S TS S TS SS S STNS +S S++ + S +++
Sbjct: 62 SYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLAS 121
Query: 399 S 401
S
Sbjct: 122 S 122
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 29.9 bits (64), Expect = 0.76
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +3
Query: 228 YSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTRGSG 404
YS+ S STS ++ S TS SS S ST SS ++ + S S++ SG
Sbjct: 134 YSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSG 192
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.5 bits (63), Expect = 1.00
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 219 SDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHS 374
SDS +T S+ TSII DTS+SS + T ++S SN+++ ++
Sbjct: 154 SDSSATTITSSSPSTSIIGTGSTDTSVSSTLTYHT-PIASPTTSSNSDNEYT 204
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 498 VTHLSR*FQKWTY-QYRTLCRHQILQRHLNRSNLNLWCHCSKVNVYLQC 355
+ H + F KW Y Q+ + R L + +RSN N+ +CS+ +Y C
Sbjct: 174 IIHCLQLFFKWQYAQFLFIHRESFLFEYFHRSNDNM--YCSEHLIYALC 220
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 282 MPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDT 392
M DTSI + S+ + + DQ S +D SPS +T
Sbjct: 345 MKDTSIPAAEPASSTTSARDQTPSTPKDVGSPSTAET 381
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 28.7 bits (61), Expect = 1.7
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 231 STISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTRGS 401
+TIS+ STS +S S T+ SS S ++ S MS + + S S+ + GS
Sbjct: 420 ATISQSSTSGSSSGSSSASTTASSSSVSSGSSISSGSSSMSTSYTSASGSSAHSSGS 476
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +3
Query: 756 LEECSICFEIMLKDQELMXL-PCTHNFHSQCIMPW 857
L ECS+C + + + C H FH CI W
Sbjct: 194 LYECSVCTDTINPSTSIWSCGTCYHVFHLSCIRKW 228
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.3 bits (60), Expect = 2.3
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 216 DSDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTR 395
+S+S S+ SE S S +S E S ++ SS SES++S S ++ + TE+ S+ +
Sbjct: 86 ESESESSSSE-SESSSSESESSSSESESSS--SESSSSESEEEVIVKTEEKKESSSESSS 142
Query: 396 GS 401
S
Sbjct: 143 SS 144
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 28.3 bits (60), Expect = 2.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 762 ECSICFEIMLKDQELMXLPCTHNFHSQCIMPWL---QEKQTCPNCRK 893
+C IC + + L PC H F + CI+ L Q CP CR+
Sbjct: 205 KCVICLD---SPENLSCTPCGHIFCNFCILSALGTTAATQKCPVCRR 248
>SPAC1705.03c ||SPAC23H4.19|conserved fungal
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 225 SYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTRG 398
S +TIS S+ D S + ++ S+ S +T S SSD S++ + S+ + G
Sbjct: 346 SVATISATSSYDLSSTVSATSGSATSATGSATTTSYSSDSSASSSSSSSHESSAASNG 403
>SPAC343.03 |apc11||anaphase-promoting complex subunit
Apc11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 94
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 819 CTHNFHSQCIMPWLQEKQTCPNCRKDA*SKVIKE 920
C H FH+ CI WL + C D + V+ +
Sbjct: 52 CKHIFHAHCIQNWLATSGSQGQCPMDRQTFVVAD 85
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.5 bits (58), Expect = 4.0
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 222 DSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSN-TEDTHSPSNND 389
D ST S++ + + +PD S R +TN SS Q+ SN D+ SPS D
Sbjct: 202 DEVSTNRLSSSTSSMNCRNLVPDNFNISIRPNTTNYRSSIQENSNGNRDSISPSAYD 258
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.1 bits (57), Expect = 5.3
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 216 DSDSYSTISEHSTSDTSI-IEDSMPDTSISSCRSES-TNSVSSDQDMSNTEDTHSPSNND 389
DS Y+ +H DT+ +D + + S S + S D+D+ E+ NND
Sbjct: 204 DSSQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSGSESYERDEDVDEEEEEDDDENND 263
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 26.2 bits (55), Expect = 9.3
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 216 DSDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHS-PSN 383
DS+S S SE S + + D S S SES + S+ + + E S PS+
Sbjct: 80 DSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESERSGPSS 136
>SPBC13G1.01c |nam9||mitochondrial ribosomal protein subunit
S4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 213 MDSDSYSTISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDM-SNTEDTHSPSNND 389
+D S S+++T I+D +SS E+ +D D+ T + PS N+
Sbjct: 145 VDQKSVMNCVSASSNNTPSIQDGKQTEQVSSKDGENEKKKDNDDDLFEQTSNGKLPSINE 204
Query: 390 T 392
T
Sbjct: 205 T 205
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 9.3
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 216 DSDSYST--ISEHSTSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSN 383
D YST ++H T+ ++ + DS S+S +S S SS SNT+ + PS+
Sbjct: 370 DPSLYSTWIANKHKTASSATV-DSPLRRSLSVDAMQSNASFSSYSSTSNTDKSLRPSS 426
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,009,787
Number of Sequences: 5004
Number of extensions: 78139
Number of successful extensions: 329
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 667380970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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