Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_O04
         (1230 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    27   1.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   1.1  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    26   2.6  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    25   4.5  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   6.0  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    25   6.0  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +3

Query: 222 DSYSTISEHSTSDTSIIEDSMPDTSISSCRSEST-----NSVSSDQDMSNTEDTHSP 377
           D Y    ++ TS  S   D    +S SS  SES      +S  SD D  ++E+ + P
Sbjct: 439 DQYRLRKQNDTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQP 495



 Score = 26.6 bits (56), Expect = 1.5
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 273 EDSMPDTSISSCRSESTNSVSSDQDMSNTED 365
           +DS   +S SS  S+S +S SSD   S++E+
Sbjct: 363 DDSSSSSSSSSSDSDSDSSSSSDSSSSSSEE 393


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +3

Query: 222 DSYSTISEHSTSDTSIIEDSMPDTSISSCRSEST-----NSVSSDQDMSNTEDTHSP 377
           D Y    ++ TS  S   D    +S SS  SES      +S  SD D  ++E+ + P
Sbjct: 439 DQYRLRKQNDTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQP 495



 Score = 26.6 bits (56), Expect = 1.5
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 273 EDSMPDTSISSCRSESTNSVSSDQDMSNTED 365
           +DS   +S SS  S+S +S SSD   S++E+
Sbjct: 363 DDSSSSSSSSSSDSDSDSSSSSDSSSSSSEE 393


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = +3

Query: 252 TSDTSIIEDSMPDTSISSCRSESTNSVSSDQDMSNTEDTHSPSNNDTRG 398
           TS +       P T  +   + + NS +S QD+S      S +N+   G
Sbjct: 122 TSQSCKYASEGPSTGTNVINNNNNNSTTSPQDLSTASGGSSGANDGNNG 170


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 489 LSR*FQKWTYQYRTLCRHQILQRHLNRSNLNLW 391
           L R F +W     +LCR  +LQR  N  NL L+
Sbjct: 9   LQRIFPRWRSAQTSLCRTILLQR--NVRNLRLY 39


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = -2

Query: 578 IGIRIHSFLDVLXRQIPCLEGHTPVLM 498
           + + +  +L    +Q+P + GHTP+++
Sbjct: 281 LALMVTIYLVYFAQQLPAISGHTPLIV 307


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 739 RKCSSLSLFIWLSSAFLLGLIICVNPLKNIINGDRLSSKGTSIEELVM 596
           R    L L  WL+S  +LG+     P     N   +S+   +++E V+
Sbjct: 5   RSAFGLLLLAWLASVTILGVEAYATPPPTTANCTTVSTFDAALQECVV 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,008,175
Number of Sequences: 2352
Number of extensions: 20445
Number of successful extensions: 87
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140200221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)