Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_O03
(1322 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.016
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.016
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.016
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.064
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.064
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.064
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.064
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.064
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 34 0.20
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 34 0.20
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.45
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 33 0.60
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 33 0.60
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.60
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 33 0.60
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 33 0.60
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 33 0.60
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.60
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 33 0.60
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.79
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 32 0.79
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 32 0.79
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.4
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.4
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.8
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 1.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 4.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 4.2
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 29 5.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 5.6
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 5.6
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 5.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 7.3
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 7.3
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 7.3
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 7.3
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 29 9.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 9.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 9.7
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 9.7
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 9.7
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 9.7
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.016
Identities = 34/126 (26%), Positives = 39/126 (30%), Gaps = 9/126 (7%)
Frame = +1
Query: 916 GXXPXLXPP-GXTPLXXRITXPXEXXAGXXPPPXXGXPXXXXX*K----KXXXXXPXPXK 1080
G P PP G PL + P AG PPP G P P P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 1081 KPXSPPXKXSGNXXTRQXXP---XXXPXXFRXGXPPXXP-QKKKXPXXAPPPXPTXXXXK 1248
PP G+ T P P G PP P QK++ P +PP
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Query: 1249 XKXXPP 1266
PP
Sbjct: 355 PTGRPP 360
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 1067 PXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P PPP K L + PPP P +G P P PPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPP--PPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.016
Identities = 34/126 (26%), Positives = 39/126 (30%), Gaps = 9/126 (7%)
Frame = +1
Query: 916 GXXPXLXPP-GXTPLXXRITXPXEXXAGXXPPPXXGXPXXXXX*K----KXXXXXPXPXK 1080
G P PP G PL + P AG PPP G P P P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 1081 KPXSPPXKXSGNXXTRQXXP---XXXPXXFRXGXPPXXP-QKKKXPXXAPPPXPTXXXXK 1248
PP G+ T P P G PP P QK++ P +PP
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Query: 1249 XKXXPP 1266
PP
Sbjct: 376 PTGRPP 381
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 1067 PXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P PPP K L + PPP P +G P P PPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPP--PPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.016
Identities = 34/126 (26%), Positives = 39/126 (30%), Gaps = 9/126 (7%)
Frame = +1
Query: 916 GXXPXLXPP-GXTPLXXRITXPXEXXAGXXPPPXXGXPXXXXX*K----KXXXXXPXPXK 1080
G P PP G PL + P AG PPP G P P P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 1081 KPXSPPXKXSGNXXTRQXXP---XXXPXXFRXGXPPXXP-QKKKXPXXAPPPXPTXXXXK 1248
PP G+ T P P G PP P QK++ P +PP
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Query: 1249 XKXXPP 1266
PP
Sbjct: 361 PTGRPP 366
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 1067 PXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P PPP K L + PPP P +G P P PPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPP--PPAAGSPPPPRTGSPPPPPTGSPPP 288
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.064
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 6/64 (9%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPG-XPXXSG-XXXPXXXPKKKXNP----XX 1213
P P P P PPP G P PPPG P G P P + P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 1214 PPPP 1225
PPPP
Sbjct: 334 PPPP 337
Score = 34.3 bits (75), Expect = 0.20
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPP--GXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P P P PPP + P PPP G P P P PPPP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +1
Query: 1084 PXSPPXKXSGNXXTRQXXPXXXPXXF----RXGXPPXXPQKKKXPXXAPPPXPTXXXXKX 1251
P PP + G P P F G PP P + P PPP P
Sbjct: 300 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Query: 1252 KXXPPXPP 1275
P PP
Sbjct: 360 PGMYPPPP 367
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/85 (25%), Positives = 25/85 (29%), Gaps = 5/85 (5%)
Frame = +1
Query: 1066 PXPXKKPXSPPXKXSGNXXTRQXXPXXX---PXXFRXGXPPXXPQKKKXPXXA--PPPXP 1230
P P P PP SG P P PP P + P PPP P
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Query: 1231 TXXXXKXKXXPPXPPKXXXXXXGXF 1305
PP PP+ G +
Sbjct: 339 PGMRYPGGMPPPPPPRYPSAGPGMY 363
Score = 29.5 bits (63), Expect = 5.6
Identities = 30/124 (24%), Positives = 32/124 (25%)
Frame = +2
Query: 848 PPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLXXXXXXXXXXXHPLKXGGP 1027
PP P P S P+ PG P PP G+ P G P
Sbjct: 261 PPVPPP--PPSVTPMPPPMPPTPGMTPRPPPPPSS----GMWPPPPPPPPGRTPGPPGMP 314
Query: 1028 XXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNP 1207
P P PPP G P PPP P P P
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
Query: 1208 XXPP 1219
PP
Sbjct: 372 PAPP 375
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.064
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPP---GXPXXSGXXXPXXXPKKKXNPXXPPP 1222
P P P PPP + + PPP G P SG P P P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 1223 P 1225
P
Sbjct: 776 P 776
Score = 35.1 bits (77), Expect = 0.11
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXP-AXXPPPGXPXXSGXXXPXX 1183
P G P P P PPP G L P + PPP P G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 1184 XPKK---KXNPXXPPPP 1225
P K P PPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 5.6
Identities = 37/135 (27%), Positives = 40/135 (29%)
Frame = +2
Query: 794 PXVSQXGXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLX 973
P S G +LPP PP P P+T G P PP P G
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLP------PIT------GGPPPPPPPGGLPPITGG-- 741
Query: 974 XXXXXXXXXXHPLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXP 1153
P+ G P P P P P PPP G P PPPG
Sbjct: 742 PPPPPPPGGLPPISGGPP---PPPPPPGGCPPPP---PPPPPGGFKG--GPPPPPPPGMF 793
Query: 1154 XXSGXXXPXXXPKKK 1198
P P KK
Sbjct: 794 APMAPVIPDYLPPKK 808
Score = 29.1 bits (62), Expect = 7.3
Identities = 29/113 (25%), Positives = 32/113 (28%), Gaps = 1/113 (0%)
Frame = +1
Query: 940 PGXTPLXXRITXPXEXXAGXXP-PPXXGXPXXXXX*KKXXXXXPXPXKKPXSPPXKXSGN 1116
P P ++ P G PP G P P P PP +G
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPI--TGG 741
Query: 1117 XXTRQXXPXXXPXXFRXGXPPXXPQKKKXPXXAPPPXPTXXXXKXKXXPPXPP 1275
P P G PP P P PPP P K PP PP
Sbjct: 742 PPP-PPPPGGLPP-ISGGPPPPPPP----PGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.064
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPP---GXPXXSGXXXPXXXPKKKXNPXXPPP 1222
P P P PPP + + PPP G P SG P P P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 1223 P 1225
P
Sbjct: 776 P 776
Score = 35.1 bits (77), Expect = 0.11
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXP-AXXPPPGXPXXSGXXXPXX 1183
P G P P P PPP G L P + PPP P G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 1184 XPKK---KXNPXXPPPP 1225
P K P PPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 29.5 bits (63), Expect = 5.6
Identities = 37/135 (27%), Positives = 40/135 (29%)
Frame = +2
Query: 794 PXVSQXGXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLX 973
P S G +LPP PP P P+T G P PP P G
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLP------PIT------GGPPPPPPPGGLPPITGG-- 741
Query: 974 XXXXXXXXXXHPLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXP 1153
P+ G P P P P P PPP G P PPPG
Sbjct: 742 PPPPPPPGGLPPISGGPP---PPPPPPGGCPPPP---PPPPPGGFKG--GPPPPPPPGMF 793
Query: 1154 XXSGXXXPXXXPKKK 1198
P P KK
Sbjct: 794 APMAPVIPDYLPPKK 808
Score = 29.1 bits (62), Expect = 7.3
Identities = 29/113 (25%), Positives = 32/113 (28%), Gaps = 1/113 (0%)
Frame = +1
Query: 940 PGXTPLXXRITXPXEXXAGXXP-PPXXGXPXXXXX*KKXXXXXPXPXKKPXSPPXKXSGN 1116
P P ++ P G PP G P P P PP +G
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPI--TGG 741
Query: 1117 XXTRQXXPXXXPXXFRXGXPPXXPQKKKXPXXAPPPXPTXXXXKXKXXPPXPP 1275
P P G PP P P PPP P K PP PP
Sbjct: 742 PPP-PPPPGGLPP-ISGGPPPPPPP----PGGCPPPPPPPPPGGFKGGPPPPP 788
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.064
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 6/64 (9%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPG-XPXXSG-XXXPXXXPKKKXNP----XX 1213
P P P P PPP G P PPPG P G P P + P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 1214 PPPP 1225
PPPP
Sbjct: 344 PPPP 347
Score = 34.3 bits (75), Expect = 0.20
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPP--GXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P P P PPP + P PPP G P P P PPPP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = +1
Query: 1084 PXSPPXKXSGNXXTRQXXPXXXPXXF----RXGXPPXXPQKKKXPXXAPPPXPTXXXXKX 1251
P PP + G P P F G PP P + P PPP P
Sbjct: 310 PPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Query: 1252 KXXPPXPP 1275
P PP
Sbjct: 370 PGMYPPPP 377
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/85 (25%), Positives = 25/85 (29%), Gaps = 5/85 (5%)
Frame = +1
Query: 1066 PXPXKKPXSPPXKXSGNXXTRQXXPXXX---PXXFRXGXPPXXPQKKKXPXXA--PPPXP 1230
P P P PP SG P P PP P + P PPP P
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Query: 1231 TXXXXKXKXXPPXPPKXXXXXXGXF 1305
PP PP+ G +
Sbjct: 349 PGMRYPGGMPPPPPPRYPSAGPGMY 373
Score = 29.5 bits (63), Expect = 5.6
Identities = 30/124 (24%), Positives = 32/124 (25%)
Frame = +2
Query: 848 PPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLXXXXXXXXXXXHPLKXGGP 1027
PP P P S P+ PG P PP G+ P G P
Sbjct: 271 PPVPPP--PPSVTPMPPPMPPTPGMTPRPPPPPSS----GMWPPPPPPPPGRTPGPPGMP 324
Query: 1028 XXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNP 1207
P P PPP G P PPP P P P
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
Query: 1208 XXPP 1219
PP
Sbjct: 382 PAPP 385
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.064
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPP---GXPXXSGXXXPXXXPKKKXNPXXPPP 1222
P P P PPP + + PPP G P SG P P P PPP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 1223 P 1225
P
Sbjct: 359 P 359
Score = 35.1 bits (77), Expect = 0.11
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXP-AXXPPPGXPXXSGXXXPXX 1183
P G P P P PPP G L P + PPP P G P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 1184 XPKK---KXNPXXPPPP 1225
P K P PPPP
Sbjct: 357 PPPPGGFKGGPPPPPPP 373
Score = 29.5 bits (63), Expect = 5.6
Identities = 37/135 (27%), Positives = 40/135 (29%)
Frame = +2
Query: 794 PXVSQXGXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLX 973
P S G +LPP PP P P+T G P PP P G
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLP------PIT------GGPPPPPPPGGLPPITGG-- 324
Query: 974 XXXXXXXXXXHPLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXP 1153
P+ G P P P P P PPP G P PPPG
Sbjct: 325 PPPPPPPGGLPPISGGPP---PPPPPPGGCPPPP---PPPPPGGFKG--GPPPPPPPGMF 376
Query: 1154 XXSGXXXPXXXPKKK 1198
P P KK
Sbjct: 377 APMAPVIPDYLPPKK 391
Score = 29.1 bits (62), Expect = 7.3
Identities = 29/113 (25%), Positives = 32/113 (28%), Gaps = 1/113 (0%)
Frame = +1
Query: 940 PGXTPLXXRITXPXEXXAGXXP-PPXXGXPXXXXX*KKXXXXXPXPXKKPXSPPXKXSGN 1116
P P ++ P G PP G P P P PP +G
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPI--TGG 324
Query: 1117 XXTRQXXPXXXPXXFRXGXPPXXPQKKKXPXXAPPPXPTXXXXKXKXXPPXPP 1275
P P G PP P P PPP P K PP PP
Sbjct: 325 PPP-PPPPGGLPP-ISGGPPPPPPP----PGGCPPPPPPPPPGGFKGGPPPPP 371
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical protein
C02C6.1a protein.
Length = 830
Score = 34.3 bits (75), Expect = 0.20
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPP 1222
P P + P PP P PPPG P G P P + P PPP
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP-TRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 34.3 bits (75), Expect = 0.20
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPP 1222
P P + P PP P PPPG P G P P + P PPP
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIP-TRPGPGGPPP 824
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical protein
F54B11.2 protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.45
Identities = 21/73 (28%), Positives = 24/73 (32%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXX 1186
P K G P P P + PPP K P PPG P G P
Sbjct: 120 PGKPGKPGAPGNPGAPGKGAAVPCEAKTPPPCK------PCPAGPPGPPGPDGPAGPAGP 173
Query: 1187 PKKKXNPXXPPPP 1225
+ +P P PP
Sbjct: 174 DGEAGSPAAPSPP 186
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34
protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.60
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXX 1186
P + G P P P + PPP K P PPG P SG
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 1187 PKKKXNPXXPPP 1222
P + P P P
Sbjct: 174 PGQDAAPGEPGP 185
Score = 30.7 bits (66), Expect = 2.4
Identities = 32/142 (22%), Positives = 34/142 (23%), Gaps = 5/142 (3%)
Frame = +2
Query: 812 GXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLXXXXXXX 991
G PP C P TP +P P P P
Sbjct: 127 GNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPK 186
Query: 992 XXXXHPLKXGGPXXXXXKKXPXXXHPXPXKNPXPP----PXKXVGTLX-PAXXPPPGXPX 1156
P G P P P P PP P G+ P PG P
Sbjct: 187 GPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPG 246
Query: 1157 XSGXXXPXXXPKKKXNPXXPPP 1222
G P P NP P P
Sbjct: 247 PKGPNGPDGQPGADGNPGAPGP 268
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein 43
protein.
Length = 303
Score = 32.7 bits (71), Expect = 0.60
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXX 1186
P K G P P P + PPP K P PPG P G
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 177
Query: 1187 PKKKXNPXXPPP 1222
P P P P
Sbjct: 178 PGTDATPGLPGP 189
Score = 29.1 bits (62), Expect = 7.3
Identities = 34/140 (24%), Positives = 38/140 (27%), Gaps = 3/140 (2%)
Frame = +2
Query: 806 QXGXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLXXXXX 985
Q G PP C P TP +P P P P P G
Sbjct: 129 QPGVPGKPPTAPCEPTTPPPCKPCPQGP---PGPPGPPGAPGDPGEAGTPGRPGTDATPG 185
Query: 986 XXXXXXHPLKXGGPXXXXXKKXPXXXHPXPXKNP--XPPPXKXVGTLXPAXXP-PPGXPX 1156
P GP + P P ++ P G PA P PPG P
Sbjct: 186 LPGPRGPP----GPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPG 241
Query: 1157 XSGXXXPXXXPKKKXNPXXP 1216
G P PK P P
Sbjct: 242 NDGPPGP-PGPKGSPGPDGP 260
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.60
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +2
Query: 1073 PXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P P G + P+ P P P G P P P P PP
Sbjct: 200 PSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPP 250
Score = 31.9 bits (69), Expect = 1.0
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +2
Query: 1067 PXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P P P P P+ P PG S P P + P PP P
Sbjct: 99 PSPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSVEPSEDHQPSGPPSP 151
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +2
Query: 1073 PXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P ++P P G + P+ P P P G P PK P PP P
Sbjct: 183 PSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPK----PSEPPSP 229
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P P P P GT+ P+ P P P G P P+ P PP P
Sbjct: 77 PTSVVPQPSNEPSP------GTVAPSDEPSPSGPPSPGPVNPSEDPQ----PSGPPSP 124
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 32.7 bits (71), Expect = 0.60
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXX 1186
P + G P P P + PPP K P PPG P SG
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 1187 PKKKXNPXXPPP 1222
P + P P P
Sbjct: 174 PGQDAAPGEPGP 185
Score = 28.7 bits (61), Expect = 9.7
Identities = 32/142 (22%), Positives = 37/142 (26%), Gaps = 5/142 (3%)
Frame = +2
Query: 812 GXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLXXXXXXX 991
G PP C P TP +P P P P
Sbjct: 127 GNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPK 186
Query: 992 XXXXHPLKXGGPXXXXXKKXPXXXHPXPXKNPXPP----PXKXVGTLX-PAXXPPPGXPX 1156
P G P ++ P P + P PP P G+ P PG P
Sbjct: 187 GPKGPPGAPGAPEHQESQECPRGEPLIPGE-PGPPGEAGPQGPPGSPGQPGADGSPGQPG 245
Query: 1157 XSGXXXPXXXPKKKXNPXXPPP 1222
G P P NP P P
Sbjct: 246 PKGPNGPDGQPGADGNPGAPGP 267
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.60
Identities = 33/144 (22%), Positives = 36/144 (25%), Gaps = 4/144 (2%)
Frame = +2
Query: 812 GXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXPGXH---PXXPPXXXPHWXXGLXXXX 982
G PP C P TP RP P P + P P G
Sbjct: 137 GNPGRPPAQPCHPITPPPCRPCPQGPPGAPGSPGPQGNAGAPGQPGHGGGSGAPGPAGPK 196
Query: 983 XXXXXXXHPLKXGGPXXXXXKKXPXXXHPXPXK-NPXPPPXKXVGTLXPAXXPPPGXPXX 1159
HP + G P P + P PP P PG P
Sbjct: 197 GQRGAPGHPGQAGSPGRPGVDAQSQSNPGAPGQAGPQGPPGPSGAPGAPGGPGYPGPPGQ 256
Query: 1160 SGXXXPXXXPKKKXNPXXPPPPXQ 1231
G P NP P P Q
Sbjct: 257 KGPSGAPGQPGSDGNPGAPGQPGQ 280
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen
RAM-4 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.60
Identities = 20/72 (27%), Positives = 23/72 (31%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXX 1186
P + G P P P + PPP K P PPG P SG
Sbjct: 114 PGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGL 173
Query: 1187 PKKKXNPXXPPP 1222
P + P P P
Sbjct: 174 PGQDAAPGEPGP 185
Score = 30.7 bits (66), Expect = 2.4
Identities = 32/142 (22%), Positives = 34/142 (23%), Gaps = 5/142 (3%)
Frame = +2
Query: 812 GXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLXXXXXXX 991
G PP C P TP +P P P P
Sbjct: 127 GNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPK 186
Query: 992 XXXXHPLKXGGPXXXXXKKXPXXXHPXPXKNPXPP----PXKXVGTLX-PAXXPPPGXPX 1156
P G P P P P PP P G+ P PG P
Sbjct: 187 GPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPG 246
Query: 1157 XSGXXXPXXXPKKKXNPXXPPP 1222
G P P NP P P
Sbjct: 247 PKGPNGPDGQPGADGNPGAPGP 268
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.7 bits (71), Expect = 0.60
Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = +2
Query: 1067 PXPXKNPXPPPXKXVGTLXPAXXPPPG-XPXXSGXXXPXXXPKKKXNP--XXPPPPXQXX 1237
P P P PPP + + P PPP +G P P +P PPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLP 1397
Query: 1238 XXXKXXXXP 1264
K P
Sbjct: 1398 SEEKKNPLP 1406
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen protein.
Length = 303
Score = 32.7 bits (71), Expect = 0.60
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXX 1186
P K G P P P + PPP K P PPG P G
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 177
Query: 1187 PKKKXNPXXPPP 1222
P P P P
Sbjct: 178 PGTDATPGLPGP 189
Score = 29.1 bits (62), Expect = 7.3
Identities = 34/140 (24%), Positives = 38/140 (27%), Gaps = 3/140 (2%)
Frame = +2
Query: 806 QXGXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXPGXHPXXPPXXXPHWXXGLXXXXX 985
Q G PP C P TP +P P P P P G
Sbjct: 129 QPGVPGKPPTAPCEPTTPPPCKPCPQGP---PGPPGPPGAPGDPGEAGTPGRPGTDATPG 185
Query: 986 XXXXXXHPLKXGGPXXXXXKKXPXXXHPXPXKNP--XPPPXKXVGTLXPAXXP-PPGXPX 1156
P GP + P P ++ P G PA P PPG P
Sbjct: 186 LPGPRGPP----GPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPG 241
Query: 1157 XSGXXXPXXXPKKKXNPXXP 1216
G P PK P P
Sbjct: 242 NDGPPGP-PGPKGSPGPDGP 260
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.79
Identities = 28/124 (22%), Positives = 36/124 (29%), Gaps = 2/124 (1%)
Frame = +2
Query: 914 PGXHPXXPPXXXPHWXXGLXXXXXXXXXXXHPLKXGGPXXXXXK--KXPXXXHPXPXKNP 1087
P HP PP PH HP G + + P H +P
Sbjct: 74 PYQHPHQPPPAHPH-----------HLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASP 122
Query: 1088 XPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPPXQXXXXXKXXXXPX 1267
PPP + PPP P P P ++ P PP P + P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRP-PMTPPSPQRRPPRTPPSPEPR 181
Query: 1268 XRPK 1279
P+
Sbjct: 182 NPPR 185
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Frame = +2
Query: 1067 PXPXKNPXPPPXKXVGTLXPAXXPPPGX---PXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P + P PP + P PP P P P+ +P PPPP
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.3 bits (70), Expect = 0.79
Identities = 32/106 (30%), Positives = 34/106 (32%)
Frame = -3
Query: 1230 WXGGGGXXGXFFFLGXXWGXXXPEXLGXPGGGXLAGXXVPTXFXGGGXGFFXGXGXXXXG 1051
W GGGG G G WG G GG G GGG G + G G G
Sbjct: 40 WGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGN--WGGNGGGRGDWGGNGGGGRG 97
Query: 1050 FFLXXXXXGPPXXRGWXGAGLPFLGXGNPXXQWGXXXGG*XGXXPG 913
G G G + G GN WG GG G G
Sbjct: 98 GGGRGDWGG-----NNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGG 138
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 32.3 bits (70), Expect = 0.79
Identities = 33/144 (22%), Positives = 35/144 (24%), Gaps = 4/144 (2%)
Frame = +2
Query: 812 GXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXP---GXHPXXPPXXXPHWXXGLXXXX 982
G PP C P TP RP P P P P G
Sbjct: 116 GNPGRPPAQPCDPITPPPCRPCPQGPPGAPGSPGPQGDAGAPGQPGFGSGFGAPGPAGPK 175
Query: 983 XXXXXXXHPLKXGGPXXXXXKKXPXXXHPXPXK-NPXPPPXKXVGTLXPAXXPPPGXPXX 1159
HP + G P P + P PP P PG P
Sbjct: 176 GQRGAPGHPGQAGAPGQPGVDAQSQSTPGAPGQAGPQGPPGSSGAPGAPGGPGFPGAPGS 235
Query: 1160 SGXXXPXXXPKKKXNPXXPPPPXQ 1231
G P NP P P Q
Sbjct: 236 KGPSGAPGQPGANGNPGAPGQPGQ 259
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical protein
F23H12.4 protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXX 1186
P K G P P P + PPP K P PPG P G
Sbjct: 116 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 175
Query: 1187 PKKKXNPXXPPP 1222
P P P P
Sbjct: 176 PGTDAAPGSPGP 187
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.5 bits (68), Expect = 1.4
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXX 1186
P K G P P P + PPP K P PPG P G
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 170
Query: 1187 PKKKXNPXXPPP 1222
P P P P
Sbjct: 171 PGTDAAPGSPGP 182
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 1 (col-1) gene, complete cds. ).
Length = 296
Score = 31.5 bits (68), Expect = 1.4
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +2
Query: 1007 PLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXX 1186
P K G P P P + PPP K P PPG P G
Sbjct: 111 PGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGR 170
Query: 1187 PKKKXNPXXPPP 1222
P P P P
Sbjct: 171 PGTDAAPGSPGP 182
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical protein
C02C6.1b protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPP 1222
P P + P PP P PPPG P G P P + P P
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAP 825
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2
Query: 1085 PXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P PPP PA PPP P P P ++ P PPPP
Sbjct: 95 PAPPPAPYPQHAVPAPAPPPA-PYPQ-HAVPAPAPYQQQPPPPPPPP 139
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPP 1222
P P + P PP P PPPG P G P P + P P
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAP 825
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/77 (28%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = +2
Query: 1004 HPLKXGGPXXXXXKKXPXXXHPXPXKNPXPPPXKXVGTLXPAXXP--PPGXPXXS-GXXX 1174
HP G P + P P P PP + P P PP P G
Sbjct: 670 HPPPMGFPFQHQLTQLPGQPRPAGLP-PGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPP 728
Query: 1175 PXXXPKKKXNPXXPPPP 1225
P P +P PPPP
Sbjct: 729 PQGIPPMGFDPNKPPPP 745
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 31.1 bits (67), Expect = 1.8
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = +2
Query: 1067 PXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXX-PXXXPKKKXNPXXPPPPXQXXXX 1243
P P NP P P K P P P S P PK K NP P P
Sbjct: 231 PKPNPNPKPEP-KPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNP-KPEPNPMPELK 288
Query: 1244 XKXXXXPXXRPK 1279
K P RPK
Sbjct: 289 PKPKHKPNSRPK 300
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 7/67 (10%)
Frame = +2
Query: 1046 KXPXXXHPXPXKN-PXPPPXKXV----GTLXPAXXPPPGX--PXXSGXXXPXXXPKKKXN 1204
K P P P + P PPP + GT P PPP SG P P
Sbjct: 528 KDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLG 587
Query: 1205 PXXPPPP 1225
PPPP
Sbjct: 588 GPPPPPP 594
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P P + P P P + + PPP P P P P PPPP
Sbjct: 470 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLP-------PIATPSSVPPPPPPPPP 520
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = +1
Query: 1066 PXPXKKPXSPPXKXSGNXXTRQXXPXXXPXXFRXGXPPXXPQKKKXPXXAPPPXPTXXXX 1245
P K P S S P P R P PQ + PPP P
Sbjct: 448 PPTIKFPISTGPSYSSTTPPTTPKPAPPPPS-RIPNPSPSPQPAEVSKSPPPPPPLPPIA 506
Query: 1246 KXKXXPPXPP 1275
PP PP
Sbjct: 507 TPSSVPPPPP 516
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 1085 PXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P PPP VG PPP P P PPPP
Sbjct: 536 PTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPP 582
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.9 bits (64), Expect = 4.2
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPPPGXPXXSG-XXXPXXXPKKKXNPXXPPPP 1225
P P P + PP + L PPG P SG P P ++ P P P
Sbjct: 57 PSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRP 115
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical protein
F52B11.4 protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.6
Identities = 31/144 (21%), Positives = 35/144 (24%), Gaps = 4/144 (2%)
Frame = +2
Query: 812 GXRSLPPXXXCVPPTPXXXRPXSHYPVTIXXXXXP---GXHPXXPPXXXPHWXXGLXXXX 982
G PP C P TP +P P P P P G
Sbjct: 132 GNPGRPPAQPCEPITPPPCKPCPQGPAGAPGAPGPQGDAGAPGAPGQGSGAGAPGPAGPK 191
Query: 983 XXXXXXXHPLKXGGPXXXXXKKXPXXXHPXPXK-NPXPPPXKXVGTLXPAXXPPPGXPXX 1159
+P + G P P + P PP P PG P
Sbjct: 192 GASGAPGNPGQAGAPGQPGADAQSESIPGAPGQAGPQGPPGPAGSPGAPGGPGQPGAPGQ 251
Query: 1160 SGXXXPXXXPKKKXNPXXPPPPXQ 1231
G P NP P P Q
Sbjct: 252 KGPSGAPGQPGADGNPGAPGQPGQ 275
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = +2
Query: 1052 PXXXHPXPXKNPXPPPXKXVGTLXPAXXPP--PGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
P P +P P GT PA PP P P P + PPPP
Sbjct: 662 PTASEPVQELSPTPEASSSTGTSAPARPPPARPEAPKKDETAVDAAAPPRPPPAARPPPP 721
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +2
Query: 1079 KNPXPPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
K P P K + P PPG P G P P K P PP
Sbjct: 209 KGPTGEPGKVINGAPPGPPGPPGPPGPQG---PPGPPGKDGQPGKAGPP 254
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +1
Query: 1066 PXPXKKPXSPPXKXSGNXXTRQXXPXXXPXXFRXGXPPXXPQKKKXPXXAPPPXPTXXXX 1245
P P +P PP G +Q P + G PP PQ+++ PPP P
Sbjct: 693 PPPPGQPYGPP----GGYPPQQQRPPYQAQPY-PGPPP--PQQQRGYGYPPPPQPGHPYQ 745
Query: 1246 KXKXXPPXPP 1275
+ P PP
Sbjct: 746 QPYGQMPPPP 755
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = +2
Query: 1067 PXPXKNPXPPPXKXVGTLXPAXXPPPGXP--XXSGXXXPXXXPKKKXNPXXPPPPXQ 1231
P + P PPP G PPPG P G P + P PPP Q
Sbjct: 674 PGGGQGPPPPPQ---GQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQ 727
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein
protein.
Length = 789
Score = 29.5 bits (63), Expect = 5.6
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +1
Query: 1066 PXPXKKPXSPPXKXSGNXXTRQXXPXXXPXXFRXGXPPXXPQKKKXPXXAPPPXPTXXXX 1245
P P +P PP G +Q P + G PP PQ+++ PPP P
Sbjct: 693 PPPPGQPYGPP----GGYPPQQQRPPYQAQPY-PGPPP--PQQQRGYGYPPPPQPGHPYQ 745
Query: 1246 KXKXXPPXPP 1275
+ P PP
Sbjct: 746 QPYGQMPPPP 755
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Frame = +2
Query: 1067 PXPXKNPXPPPXKXVGTLXPAXXPPPGXP--XXSGXXXPXXXPKKKXNPXXPPPPXQ 1231
P + P PPP G PPPG P G P + P PPP Q
Sbjct: 674 PGGGQGPPPPPQ---GQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQ 727
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = +1
Query: 1066 PXPXKKPXSPPXKXSGNXXTRQXXPXXXPXXFRXGXPPXXPQKKKXPXXAPPPXPTXXXX 1245
P K P S S P P R P PQ + PPP P
Sbjct: 441 PPTIKFPISTGTSYSSTTPPTTPKPAPPPPS-RIPNPSPSPQPAEVSKSPPPPPPLPPIA 499
Query: 1246 KXKXXPPXPP 1275
PP PP
Sbjct: 500 TPSSVPPPPP 509
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = -3
Query: 1224 GGGGXXGXFFFLGXXWGXXXPEXLGXPGGGXLAGXXVPTXFXGGG 1090
GGGG G + G G G GGG + G + GGG
Sbjct: 347 GGGGAVGQSAYFGVGGGAAGGAKTGGGGGGGIPGQSMYMGAGGGG 391
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.1 bits (62), Expect = 7.3
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = -3
Query: 1224 GGGGXXGXFFFLGXXWGXXXPEXLGXPGGGXLAGXXVPTXFXGGGXGFFXGXGXXXXG 1051
GGGG G F G G GGG G V + GGG G G G G
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQG 114
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 1091 PPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
PPP K GT P P G P K PPPP
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPP 78
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 1091 PPPXKXVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPPP 1225
PPP K GT P P G P K PPPP
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 141
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical protein
K07F5.11 protein.
Length = 290
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = -3
Query: 1224 GGGGXXGXFFFLGXXWGXXXPEXLGXPGGGXLAGXXVPTXFXGGG 1090
GGGG G + G G G GGG + G + GGG
Sbjct: 232 GGGGAVGQSAYFGVGGGAAGGAKSGGGGGGGIPGQSMYMGAGGGG 276
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.7
Identities = 28/104 (26%), Positives = 32/104 (30%)
Frame = -3
Query: 1224 GGGGXXGXFFFLGXXWGXXXPEXLGXPGGGXLAGXXVPTXFXGGGXGFFXGXGXXXXGFF 1045
GGGG G G + P G GGG +G GG G+ G G+
Sbjct: 187 GGGGCGGGGSSGGGGYAVA-PSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYA 245
Query: 1044 LXXXXXGPPXXRGWXGAGLPFLGXGNPXXQWGXXXGG*XGXXPG 913
G G G G G G G GG G G
Sbjct: 246 TGGSSGGGYSSGGSSGGGYS-TGGGGGYAGGGGGGGGSSGGYAG 288
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.7
Identities = 28/104 (26%), Positives = 32/104 (30%)
Frame = -3
Query: 1224 GGGGXXGXFFFLGXXWGXXXPEXLGXPGGGXLAGXXVPTXFXGGGXGFFXGXGXXXXGFF 1045
GGGG G G + P G GGG +G GG G+ G G+
Sbjct: 187 GGGGCGGGGSSGGGGYAVA-PSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYA 245
Query: 1044 LXXXXXGPPXXRGWXGAGLPFLGXGNPXXQWGXXXGG*XGXXPG 913
G G G G G G G GG G G
Sbjct: 246 TGGSSGGGYSSGGSSGGGYS-TGGGGGYAGGGGGGGGSSGGYAG 288
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 1064 HPXPXKNPXPPPXK-XVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPP 1222
H P P PPP + + A PPP P G P P PPP
Sbjct: 606 HAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMG--LPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 1064 HPXPXKNPXPPPXK-XVGTLXPAXXPPPGXPXXSGXXXPXXXPKKKXNPXXPPP 1222
H P P PPP + + A PPP P G P P PPP
Sbjct: 432 HAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMG--LPAVGAGAPPPPPPPPP 483
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = -3
Query: 1095 GGXGFFXGXGXXXXGFFLXXXXXGPPXXRGWXGAGLPFLGXGNPXXQWGXXXGG*XGXXP 916
G G + G G G+ GP G G G G GN WG GG G
Sbjct: 176 GQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWG 235
Query: 915 G 913
G
Sbjct: 236 G 236
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = -3
Query: 1095 GGXGFFXGXGXXXXGFFLXXXXXGPPXXRGWXGAGLPFLGXGNPXXQWGXXXGG*XGXXP 916
G G + G G G+ GP G G G G GN WG GG G
Sbjct: 214 GQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGWG 273
Query: 915 G 913
G
Sbjct: 274 G 274
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 9.7
Identities = 28/103 (27%), Positives = 36/103 (34%)
Frame = -3
Query: 1224 GGGGXXGXFFFLGXXWGXXXPEXLGXPGGGXLAGXXVPTXFXGGGXGFFXGXGXXXXGFF 1045
GGGG G + G G G GGG G + G G G + G G G+
Sbjct: 157 GGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGY- 215
Query: 1044 LXXXXXGPPXXRGWXGAGLPFLGXGNPXXQWGXXXGG*XGXXP 916
G G+ +G + G P +G GG G P
Sbjct: 216 ------GGGGDGGYGPSG-GYGGGYGPGGGYGMGGGGGGGGCP 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,886,104
Number of Sequences: 27780
Number of extensions: 276236
Number of successful extensions: 1661
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3704777368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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