Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N23
         (1316 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.7  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   4.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 25/106 (23%), Positives = 30/106 (28%), Gaps = 7/106 (6%)
 Frame = +2

Query: 860  PXCTNPPXQPXPXPXXPXN*XXXSXTRXXTQXXPPG-----PQPXXNPXPPRXGLXGXA- 1021
            P   NP   P P    P        T   TQ  PP      PQP   P P R  +   A 
Sbjct: 178  PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAV 237

Query: 1022 -XKNPXXGXGXPXGXPXKKXPXXGXTAPLXKTXXPSXKKXXXXPXN 1156
                P      P     ++ P  G   P+         +    P N
Sbjct: 238  PGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQN 283


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = +1

Query: 604 YHRLRPPGRASQKSTLKSEVAKPDRTIKIPGRFPLXSSLGRSPVPTLPPXRIPVRLSPFG 783
           + R  PPG A   + L  EV   D+T+    R    S +G      +P   I + L P G
Sbjct: 335 FMRKIPPG-AEASNILVGEVDFLDKTLSAFLRLNTASVMGDLTEVPVPTRFIFILLGPPG 393

Query: 784 KRGGF 798
             G F
Sbjct: 394 SHGSF 398


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,226
Number of Sequences: 2352
Number of extensions: 11561
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152053884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)