Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N22
         (1243 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0717 - 5219848-5220178,5220268-5220617,5221807-5221982,522...    29   5.7  

>06_01_0717 -
           5219848-5220178,5220268-5220617,5221807-5221982,
           5222065-5222302,5224492-5224657,5224792-5225159,
           5225261-5225436,5227742-5227976,5228242-5228493,
           5228513-5228848
          Length = 875

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -2

Query: 462 WSSQ*ETFGQSKCNWFKTSVHAIFSNLYNKIYDFSIVWI 346
           WS   E FG  +  W  T  H    NL    +DF I+ I
Sbjct: 169 WSGNGEAFGDGRGEWLLTVQHRESENLQTYKFDFVILCI 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,616,233
Number of Sequences: 37544
Number of extensions: 558501
Number of successful extensions: 1285
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3829445508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)