Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N22
         (1243 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99284-2|CAL49452.1|  546|Caenorhabditis elegans Hypothetical pr...    31   2.2  
Z92796-7|CAB63230.2|  546|Caenorhabditis elegans Hypothetical pr...    31   2.2  
U23511-3|AAC46790.1|  636|Caenorhabditis elegans Small protein 6...    30   3.0  
AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical ...    30   3.0  
AF104017-1|AAD12261.1|  636|Caenorhabditis elegans serine-threon...    30   3.0  
U41107-2|AAK73880.1|  111|Caenorhabditis elegans Temporarily ass...    30   3.9  
Z54327-10|CAH04696.1|  596|Caenorhabditis elegans Hypothetical p...    29   6.8  
Z54327-3|CAD36481.1|  596|Caenorhabditis elegans Hypothetical pr...    29   9.0  
Z54327-2|CAA91123.1|  658|Caenorhabditis elegans Hypothetical pr...    29   9.0  
AL117207-19|CAB60401.2|  142|Caenorhabditis elegans Hypothetical...    29   9.0  
AF480493-1|AAL84283.1|  596|Caenorhabditis elegans EFF-1B precur...    29   9.0  
AF480492-1|AAL84282.1|  658|Caenorhabditis elegans EFF-1A precur...    29   9.0  

>Z99284-2|CAL49452.1|  546|Caenorhabditis elegans Hypothetical
           protein H25K10.1 protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +1

Query: 598 YTNKKPMDLIKEITRVR--GRYGRTHKTLLRKSHIKVPENDFLRDAIVKYAIFGLKR 762
           ++++ P D I +   V+  G YG T+ T+   +H+     D     +  YA+FGL R
Sbjct: 357 HSHEDPSDHIMQDFSVKALGEYGYTYLTVHNSTHLFTDFVDTFMPNLTPYALFGLSR 413


>Z92796-7|CAB63230.2|  546|Caenorhabditis elegans Hypothetical
           protein H25K10.1 protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +1

Query: 598 YTNKKPMDLIKEITRVR--GRYGRTHKTLLRKSHIKVPENDFLRDAIVKYAIFGLKR 762
           ++++ P D I +   V+  G YG T+ T+   +H+     D     +  YA+FGL R
Sbjct: 357 HSHEDPSDHIMQDFSVKALGEYGYTYLTVHNSTHLFTDFVDTFMPNLTPYALFGLSR 413


>U23511-3|AAC46790.1|  636|Caenorhabditis elegans Small protein 6
           protein.
          Length = 636

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
 Frame = +1

Query: 427 FALAKCLLLGTPTIKEATY-NAAAEICVTSEQMLLFQKFSRLFKTGNGRGWCKNVIQWYT 603
           FA+  C+ L     +E +   A A+      +    +  S L  +G+G G    +IQ  T
Sbjct: 203 FAVIGCIYLCITRAEEKSKARARAKTVSLKTESTYMESKSMLEDSGSGSGQAA-LIQ-RT 260

Query: 604 NKKPMDLIKEITRVRGRYGRTHKTLLRKSHIKV 702
            ++ + +IK I +  GRYG   K L R S++ V
Sbjct: 261 VRQDLTIIKTIGQ--GRYGEVRKALYRGSYVAV 291


>AL033514-5|CAA22082.1|  773|Caenorhabditis elegans Hypothetical
           protein Y75B8A.4 protein.
          Length = 773

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 22/108 (20%), Positives = 44/108 (40%)
 Frame = +1

Query: 307 IDKLTALNEALTNDPNNTEVINLIVKVAKDGMYTRFEPIAFALAKCLLLGTPTIKEATYN 486
           + K+  LNEA++N     +++     +A + +  +F    ++L          I E  Y 
Sbjct: 107 VSKVVDLNEAISNQNAIEKLVTGAKIIASNSLTDKFSREIYSL----------IDEKEYG 156

Query: 487 AAAEICVTSEQMLLFQKFSRLFKTGNGRGWCKNVIQWYTNKKPMDLIK 630
             A++CV+  + L F +              +  I+W   KK  + +K
Sbjct: 157 KLADLCVSQMKFLGFMQLLEFLGANGTDARVEMCIKWMNEKKDANTLK 204


>AF104017-1|AAD12261.1|  636|Caenorhabditis elegans serine-threonine
           kinase SMA-6 protein.
          Length = 636

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
 Frame = +1

Query: 427 FALAKCLLLGTPTIKEATY-NAAAEICVTSEQMLLFQKFSRLFKTGNGRGWCKNVIQWYT 603
           FA+  C+ L     +E +   A A+      +    +  S L  +G+G G    +IQ  T
Sbjct: 203 FAVIGCIYLCITRAEEKSKARARAKTVSLKTESTYMESKSMLEDSGSGSGQAA-LIQ-RT 260

Query: 604 NKKPMDLIKEITRVRGRYGRTHKTLLRKSHIKV 702
            ++ + +IK I +  GRYG   K L R S++ V
Sbjct: 261 VRQDLTIIKTIGQ--GRYGEVRKALYRGSYVAV 291


>U41107-2|AAK73880.1|  111|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 234 protein.
          Length = 111

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 438 QMSPIGNSNNKGGYIQCCC-RNMC 506
           Q S  G S NK GY  CCC R++C
Sbjct: 70  QCSSSGCSTNKNGYGTCCCTRDLC 93


>Z54327-10|CAH04696.1|  596|Caenorhabditis elegans Hypothetical
           protein C26D10.7 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 749 NIAYFTMASRKKSFSGTLMCDLRSNVL 669
           N+ +F  ASR + FSG+++ D +SN L
Sbjct: 400 NLVFFHNASRIRDFSGSIIVDSKSNPL 426


>Z54327-3|CAD36481.1|  596|Caenorhabditis elegans Hypothetical
           protein C26D10.5b protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 749 NIAYFTMASRKKSFSGTLMCDLRSNVL 669
           N+ +F  ASR + FSG+++ D +SN L
Sbjct: 400 NLVFFHNASRIRDFSGSIIVDSKSNRL 426


>Z54327-2|CAA91123.1|  658|Caenorhabditis elegans Hypothetical
           protein C26D10.5a protein.
          Length = 658

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 749 NIAYFTMASRKKSFSGTLMCDLRSNVL 669
           N+ +F  ASR + FSG+++ D +SN L
Sbjct: 400 NLVFFHNASRIRDFSGSIIVDSKSNRL 426


>AL117207-19|CAB60401.2|  142|Caenorhabditis elegans Hypothetical
           protein Y60A3A.16 protein.
          Length = 142

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = +1

Query: 610 KPMDLIKEITRVRGRYG----RTHKTLLRKSHIKVPENDFLRDAIVKYAI 747
           +P +++KEI +V G YG    +  + LLR SH+     D L DA VK+ I
Sbjct: 60  EPDEILKEIQKVLGSYGIDYEQQKRFLLRCSHV-----DPLTDASVKWEI 104


>AF480493-1|AAL84283.1|  596|Caenorhabditis elegans EFF-1B precursor
           protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 749 NIAYFTMASRKKSFSGTLMCDLRSNVL 669
           N+ +F  ASR + FSG+++ D +SN L
Sbjct: 400 NLVFFHNASRIRDFSGSIIVDSKSNRL 426


>AF480492-1|AAL84282.1|  658|Caenorhabditis elegans EFF-1A precursor
           protein.
          Length = 658

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 749 NIAYFTMASRKKSFSGTLMCDLRSNVL 669
           N+ +F  ASR + FSG+++ D +SN L
Sbjct: 400 NLVFFHNASRIRDFSGSIIVDSKSNRL 426


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,011,359
Number of Sequences: 27780
Number of extensions: 509346
Number of successful extensions: 1284
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3443371140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)