Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N22
         (1243 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    24   2.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   2.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   2.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   3.2  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 384 LYNKIYDFSIVWIICQCFIK 325
           L++K + F+   IIC+CF K
Sbjct: 64  LFSKDFRFAFKSIICKCFCK 83


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 384 LYNKIYDFSIVWIICQCFIK 325
           L++K + F+   IIC+CF K
Sbjct: 512 LFSKDFRFAFKSIICKCFCK 531


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 14/63 (22%), Positives = 30/63 (47%)
 Frame = +1

Query: 652 RYGRTHKTLLRKSHIKVPENDFLRDAIVKYAIFGLKRAKQLMGDKPGTSEIFEYIQKVED 831
           ++  T K L +++     +  F+ DA++ +A       K+L   KPG  +  +  +  E 
Sbjct: 452 KFCSTEKRLTKQNTAFENQLQFVSDAVMAFAYAFRDMHKELCDGKPGLCDAMKPTKGTEL 511

Query: 832 LRH 840
           L++
Sbjct: 512 LKY 514


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 547 LFKTGNGRGW 576
           +F+T NGRGW
Sbjct: 499 IFRTANGRGW 508


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,554
Number of Sequences: 438
Number of extensions: 6342
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42382239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)