Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_N19
(1303 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 108 1e-24
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 99 2e-21
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 65 2e-11
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 63 7e-11
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 56 1e-08
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 49 2e-06
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 40 0.001
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 38 0.004
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 30 0.61
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 28 2.5
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 28 2.5
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 28 3.3
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 4.3
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 27 4.3
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 27 7.5
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 26 9.9
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 108 bits (260), Expect = 1e-24
Identities = 54/141 (38%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
Frame = +2
Query: 518 LGIVLAAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDIV 697
+ I LA V++VT + QE +S + +++ N+VP + VIR G+ + A LV GD+V
Sbjct: 85 ISIALAIVIVVT--VGFVQEYRSEQSLKALNNLVPHYCNVIRSGKTEHIVASKLVPGDLV 142
Query: 698 EVKFGDRIPADIRIIEARGFKVDNSSLTGESEPQSRGAEFTNEN--PLETKNLAFFSTNA 871
++ GDR+PAD+RI+EA ++D S+LTGE+ P+ + +E + N E N+AF T
Sbjct: 143 ILQIGDRVPADLRIVEATELEIDESNLTGENSPRKKSSEAISSNISLTERNNIAFMGTLV 202
Query: 872 VEGTAKGIVICCGDNTVMGRI 934
G +GIV+ G +T GR+
Sbjct: 203 RHGHGRGIVVATGSDTEFGRV 223
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 98.7 bits (235), Expect = 2e-21
Identities = 69/228 (30%), Positives = 111/228 (48%), Gaps = 5/228 (2%)
Frame = +2
Query: 269 EELYQSFQTHPENGLSHAKAKXXLEXXGPNALTPPKQTPEWVKFCKNLFGGFALLLWIGA 448
+++ F T NGL+H +A+ L G N L W + + ++L + A
Sbjct: 16 KDVESEFLTSIPNGLTHEEAQNRLSEYGENRLEADSGVSAWKVLLRQVLNAMCVVLILAA 75
Query: 449 ILCFIAYGIQASTVEEPADDNLYLGIVLAAVVIVTGIFSYYQESKSSKIMESFKNMVPQF 628
L F +E G V++A++++ + QE K+ K M+S + +
Sbjct: 76 ALSFGT----TDWIE---------GGVISAIIVLNITVGFIQEYKAEKTMDSLRTLASPM 122
Query: 629 ATVIREGEKLTLRAEDLVLGDIVEVKFGDRIPADIRIIEARGFKVDNSSLTGESEPQSRG 808
A V R + + + LV GD+V +K GD +PAD+R++E F+ D + LTGES P +
Sbjct: 123 AHVTRSSKTDAIDSHLLVPGDVVVLKTGDVVPADLRLVETVNFETDEALLTGESLPVIKD 182
Query: 809 AEFT---NEN-PLETK-NLAFFSTNAVEGTAKGIVICCGDNTVMGRIA 937
A T NE+ P+ + NLA+ S+ +G AKGI G T +G IA
Sbjct: 183 AHATFQMNEDVPIGDRINLAYSSSIVTKGRAKGICYATGMQTQIGAIA 230
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 65.3 bits (152), Expect = 2e-11
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Frame = +2
Query: 257 KVTPEELYQSFQTHPENGLSHAKAKXXLEXXGPNALTPPKQTPEWVKFCKNLFGGFALLL 436
KV PEEL +T P+ GL+ ++ + + G N + K T KF G ++
Sbjct: 159 KVVPEEL---LETDPKYGLTESEVEERKKKYGLNQMKEEK-TNNIKKFLSFFVGPIQFVM 214
Query: 437 WIGAILCFIAYGIQASTVEEPADDNLYLGIVLAAVVIVTGIFSYYQESKSSKIMESFKNM 616
+ A L A G++ D + G++ A++++ + QE ++ I++ K
Sbjct: 215 ELAAAL---AAGLR---------DWVDFGVI-CALLLLNATVGFVQEYQAGSIVDELKKT 261
Query: 617 VPQFATVIREGEKLTLRAEDLVLGDIVEVKFGDRIPADIRIIEARGF-KVDNSSLTGESE 793
+ A+V+R+G + A ++V GDI+ + G PAD R+I F +VD S++TGES
Sbjct: 262 MALKASVLRDGRVKEIEASEIVPGDILHLDEGTICPADGRLITKDCFLQVDQSAITGESL 321
Query: 794 PQSRGAEFTNENPLETKNLAFFSTNAVEGTAKGIVICCGDNTVMGRIAGL--ASGLDTG 964
+ ++N + + S+ G A +V D+T +GR A L A+G G
Sbjct: 322 AVDK-----HQN-----DTMYSSSTVKRGEAFMVVTATADSTFVGRAASLVGAAGQSQG 370
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 63.3 bits (147), Expect = 7e-11
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 1/237 (0%)
Frame = +2
Query: 257 KVTPEELYQSFQTHPENGLSHAKAKXXLEXXGPNALTPPKQTPEWVKFCKNLFGGFALLL 436
K PEEL QT GL+ ++ + + G N + + P ++KF G ++
Sbjct: 71 KAVPEEL---LQTDMNTGLTMSEVEERRKKYGLNQMKEELENP-FLKFIMFFVGPIQFVM 126
Query: 437 WIGAILCFIAYGIQASTVEEPADDNLYLGIVLAAVVIVTGIFSYYQESKSSKIMESFKNM 616
+ A L A G++ D + G++ A++++ + + QE ++ I++ K
Sbjct: 127 EMAAAL---AAGLR---------DWVDFGVI-CALLMLNAVVGFVQEYQAGSIVDELKKS 173
Query: 617 VPQFATVIREGEKLTLRAEDLVLGDIVEVKFGDRIPADIRIIEAR-GFKVDNSSLTGESE 793
+ A VIREG+ L A ++V GDI+++ G I AD R++ +VD S++TGES
Sbjct: 174 LALKAVVIREGQVHELEANEVVPGDILKLDEGTIICADGRVVTPDVHLQVDQSAITGESL 233
Query: 794 PQSRGAEFTNENPLETKNLAFFSTNAVEGTAKGIVICCGDNTVMGRIAGLASGLDTG 964
+ + F S+ G +V GD+T +GR A L + G
Sbjct: 234 AVDK----------HYGDPTFASSGVKRGEGLMVVTATGDSTFVGRAASLVNAAAGG 280
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 55.6 bits (128), Expect = 1e-08
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Frame = +2
Query: 518 LGIVLAAVVIVT--GIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGD 691
+ I+ A V++VT G+ + +E + K+ N Q V+R+G + DLV+GD
Sbjct: 280 VAIMAAIVIVVTVGGVNDWQKELQFKKLNAKVSNFDVQ---VLRDGAVHSTSVFDLVVGD 336
Query: 692 IVEVKFGDRIPADIRIIEARGFKVDNSSLTGESE-----PQSRGAEFTNENPLETKN--- 847
++ V+ GD +P D +IE+ +D S++TGE++ + E T+ + KN
Sbjct: 337 VLFVEAGDVVPVDGVLIESNNLVLDESAMTGETDNIKKVDANTAIERTSPDVEYRKNADP 396
Query: 848 LAFFSTNAVEGTAKGIVICCGDNTVMGR 931
T +EG K +V G N+ GR
Sbjct: 397 YLISGTTILEGNGKLLVTAVGVNSFNGR 424
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Frame = +2
Query: 569 YQESKS----SKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDIVEVKFGDRIPADIR 736
Y ESK+ S + ++ P AT+I + E++ + A+ + GD++ VK G+ IP D
Sbjct: 295 YLESKAKGSTSAALSQLLSLAPSSATIIEDNEQIEILADLIERGDLILVKPGEIIPVDGT 354
Query: 737 IIEARGFKVDNSSLTGESEP 796
++E + VD SS++GE P
Sbjct: 355 VVEGSSY-VDESSVSGEPVP 373
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 39.5 bits (88), Expect = 0.001
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +2
Query: 557 IFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDIVEVKFGD--RIPAD 730
IF +ESK S+ PQ TVIR K T+ A+DLV+GD++ D P D
Sbjct: 234 IFLSVKESKESENRIHSIIGAPQPVTVIRNQVKQTVLADDLVIGDLLYFSNLDLKTCPVD 293
Query: 731 IRIIEARGFKVDNSSLTGESEP 796
I+ + +D S +TGES P
Sbjct: 294 -GILFSSSCLLDESMVTGESVP 314
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 37.5 bits (83), Expect = 0.004
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 503 DDNLYLGIVLAAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLV 682
D Y I + + +V+ + S + K+ + M V R+G ++ + DLV
Sbjct: 348 DSYYYYAICILIISVVSILGSLIETRKTLRRMREMSRFTCP-VRVYRDGFWTSISSTDLV 406
Query: 683 LGDIVEVKFGDR--IPADIRIIEARGFKVDNSSLTGESEPQSR 805
+GD+ E+ + PAD ++ V+ S LTGES P S+
Sbjct: 407 IGDVFEISDPELTIFPADALLLSGDCI-VNESMLTGESIPVSK 448
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 30.3 bits (65), Expect = 0.61
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 671 EDLVLGDIVEVKFGDRIPADIRII---EARGF-KVDNSSLTGESEPQSRGAEFTNENPLE 838
+D+ +GD V+V D IPADI II + G ++ +L GE+ + R A +N ++
Sbjct: 295 KDVRVGDFVKVMDNDEIPADIVIINSSDPEGICYIETKNLDGETNLKMRHALTCGKNVVD 354
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +3
Query: 27 PXIFACQIRLCVAXWRQRHLLXHGRTDSFPRRHHRPXRGCSSHSXRTVQAKQXTSRVKNG 206
P C + A + H++ H T + +H P GC R+ K+ S + G
Sbjct: 204 PSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEG 263
Query: 207 N 209
N
Sbjct: 264 N 264
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +2
Query: 248 DYHKVTPEELYQSFQTHPE--NGLSHAKAKXXLEXXGPNALTPPKQTPEWVKFCKNLFGG 421
D ++ PE + FQ E LS K + + G P + +F KNLFGG
Sbjct: 39 DKNRENPEAAREKFQKLAEAYQVLSDPKLREKYDKLGKVGAVPDAGFEDAFEFFKNLFGG 98
Query: 422 FALLLWIGAI 451
+ ++G +
Sbjct: 99 DSFRDYVGEL 108
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 671 EDLVLGDIVEVKFGDRIPADIRIIEARGFK----VDNSSLTGESEPQSRGA 811
+ L++GDIV+V + IPAD+ I+ V+ +L GE+ + + A
Sbjct: 325 KSLLVGDIVKVLADEAIPADLLILSTENSNGVCYVETKNLDGETNLKDKYA 375
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 4.3
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = -2
Query: 1011 GDKMNKVVDLLAIXVSPVSRPEARPAMRP---ITVLSPQQMTIPLAV-PSTALVEKKAKF 844
G+ K +++ S RP + RP + +L+P + + PS++++ + A
Sbjct: 380 GNVRTKAANIVRPSSSINRRPPSSINQRPPSNLRILAPSRSRATIHERPSSSILHRHAHS 439
Query: 843 LVSSGFSFVNSAPRDWGSDSPVKLELSTL 757
L SS FS A +SP +E ST+
Sbjct: 440 LTSSSFSTKTLATTKEIQNSPTLVESSTV 468
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 757 KASRFDNTDVGGNPVTEFNLDNITKHQVLGSERKFLSFTD 638
K F + + G PVT LDN+ + V S L F D
Sbjct: 478 KRKSFGQSSLSGKPVTAVMLDNVNRILVTASLDGILKFWD 517
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 26.6 bits (56), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 410 LFGGFALLLWIGAILCF 460
L+GG L W+GA+ C+
Sbjct: 513 LYGGLCFLGWLGALFCY 529
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 9.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 901 DDNSFSGTLNGVGREEGQVL 842
+D SF G +NGVGRE ++L
Sbjct: 333 EDASFLGFVNGVGREMEKIL 352
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,126,214
Number of Sequences: 5004
Number of extensions: 77246
Number of successful extensions: 251
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 711409724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -