Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N19
         (1303 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   3.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.8  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   4.8  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +2

Query: 323  KAKXXLEXXGPNALTPPKQTPEWVKFCKN 409
            K +  +   GP+A+ P  + P+ +++CK+
Sbjct: 1161 KTRPSIMLPGPSAVEPSDEMPKSLRYCKD 1189


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 966 SPVSRPEARPAMRPITVLSPQQMTIPLAVPSTAL 865
           S V+ P ARP+  P T  +P+       VPS  L
Sbjct: 97  SVVTAPPARPSQPPTTRFAPEPRAEVKFVPSVPL 130


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -1

Query: 685 KHQVLGSERKFLSFTDDGGELGDHVLEGLHDFRRLALLVVRED 557
           K   LG  R +L    + G+ G+++L+     RR+A    +ED
Sbjct: 650 KITTLGDVRNYLGIRIERGQNGEYLLDQASYIRRIAKRFGQED 692


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,065,016
Number of Sequences: 2352
Number of extensions: 18532
Number of successful extensions: 71
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 150010149
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)