SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N18
         (1240 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68319-5|CAA92703.1|  261|Caenorhabditis elegans Hypothetical pr...   129   5e-30
Z22178-4|CAA80156.1|  359|Caenorhabditis elegans Hypothetical pr...   127   2e-29
Z75525-7|CAH10769.1|  573|Caenorhabditis elegans Hypothetical pr...    83   3e-16
Z75525-6|CAA99765.2|  623|Caenorhabditis elegans Hypothetical pr...    83   3e-16
AF003925-1|AAB61344.1|  573|Caenorhabditis elegans mRNA capping ...    83   3e-16
AF125960-3|AAD14737.1|  446|Caenorhabditis elegans Hypothetical ...    44   2e-04
U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division c...    33   0.32 
U28739-6|AAM54206.1|  695|Caenorhabditis elegans Cell division c...    33   0.32 
U28739-5|AAT68903.1|  707|Caenorhabditis elegans Cell division c...    33   0.32 
U28739-4|AAM54205.1|  693|Caenorhabditis elegans Cell division c...    33   0.32 
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c...    33   0.32 
AY661747-1|AAT74546.1|  707|Caenorhabditis elegans CDC-14 phosph...    33   0.32 
AY661746-1|AAT74545.1|  695|Caenorhabditis elegans CDC-14 phosph...    33   0.32 
AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14 phosph...    33   0.32 
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph...    33   0.32 
AY661743-1|AAT74542.1|  693|Caenorhabditis elegans CDC-14 phosph...    33   0.32 
AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein phosp...    33   0.32 
AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protei...    30   3.9  
AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN phosphat...    30   3.9  
AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.     30   3.9  
AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dau...    30   3.9  
Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical pr...    29   6.8  

>Z68319-5|CAA92703.1|  261|Caenorhabditis elegans Hypothetical
           protein T23G7.5a protein.
          Length = 261

 Score =  129 bits (311), Expect = 5e-30
 Identities = 74/191 (38%), Positives = 111/191 (58%), Gaps = 8/191 (4%)
 Frame = +3

Query: 204 KLPDRWIKYNACGRVIEGTRIICFKVPLXXXXXXXXXXXXXI-WDIPALL----EAIPKL 368
           +LPDRW  Y+  GR I+GTR + FK PL             + + +  L+    +A  ++
Sbjct: 52  RLPDRWNIYDNVGRDIDGTRFVPFKTPLDSSFFDGKNMPVELQFGVKTLISLAQQANKQI 111

Query: 369 GAVIDLTNTDKYYKPEDVKAAGILHKKIIMPGR-ILPPENKVKEFMDAVDDFLG-KDSD- 539
           G VIDLTNTD+YYK  +    G+ + K+  PG  +   E+ V++F++AV +F+  K++D 
Sbjct: 112 GLVIDLTNTDRYYKKTEWADHGVKYLKLNCPGHEVNEREDLVQDFINAVKEFVNDKENDG 171

Query: 540 ILLGVHCTHGLNRTGYMVCRYMRDRLGMSGKEAIKKFERARGYAIERIVYTSDLLKQNPA 719
            L+GVHCTHGLNRTGY++CRYM D    S  +AI  FE  RG+ +ER  Y   L +    
Sbjct: 172 KLIGVHCTHGLNRTGYLICRYMIDVDNYSASDAISMFEYYRGHPMEREHYKKSLYEAERK 231

Query: 720 IDKERTNSKSA 752
               +++ KS+
Sbjct: 232 KKYGKSSGKSS 242


>Z22178-4|CAA80156.1|  359|Caenorhabditis elegans Hypothetical
           protein F54C8.4 protein.
          Length = 359

 Score =  127 bits (306), Expect = 2e-29
 Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
 Frame = +3

Query: 207 LPDRWIKYNACGRVIEGTRIICFKVPLXXXXXXXXXXXXXIWD---IPALLEAIPKLGAV 377
           +P  W K+   G VI  TR I FK P+                      L E    LG V
Sbjct: 8   VPKDWSKFQPVGNVIPRTRFIVFKTPINSQLSTKIHKEQRFTTNDLFRQLSERGQYLGLV 67

Query: 378 IDLTNTDKYYKPEDVKAAGILHKKIIMPGR-ILPPENKVKEFMDAVDDFLGK--DSDILL 548
           +DL++TD+YY  +D+    + ++K+  PGR  +  ++ V+ F   + D+  K  D D L+
Sbjct: 68  VDLSDTDRYYDKKDITGMCVQYEKVNCPGRGFIERDDCVESFHQVIQDYTDKCDDPDALI 127

Query: 549 GVHCTHGLNRTGYMVCRYMRDRLGMSGKEAIKKFERARGYAIERIVYTSDLL-----KQN 713
           GVHCT+G+NR GY++CR++ DRLG S  EAI  FE+ARGY+IE+  Y   L      K++
Sbjct: 128 GVHCTNGINRCGYLICRFLIDRLGWSSHEAIDAFEQARGYSIEKGAYVMALHKAAKDKRD 187

Query: 714 PAIDKERTNSKSATKRRHDFEYR 782
             +D +  +S+   K+++  ++R
Sbjct: 188 KQVDSDSDSSERQRKKKNKRKHR 210


>Z75525-7|CAH10769.1|  573|Caenorhabditis elegans Hypothetical
           protein C03D6.3b protein.
          Length = 573

 Score = 83.4 bits (197), Expect = 3e-16
 Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
 Frame = +3

Query: 207 LPDRWIKYNACGRVIEGTRIICFKVPLXXXXXXXXXXXXXIWDIPALLEAIP-----KLG 371
           LPDRW+     G +I       FK PL              +  PA + + P     K+G
Sbjct: 3   LPDRWLHCPKTGTLINNL-FFPFKTPLCKMYDNQIAERRYQFH-PAEVFSHPHLHGKKIG 60

Query: 372 AVIDLTNTDKYYKPEDVKAAGILHKKIIMPGR-ILPPENKVKEFMDAVDDFLGKDSDILL 548
             IDLTNTD+YY  E+V     ++ K+ M GR + P +     F+  V +F  K  D ++
Sbjct: 61  LWIDLTNTDRYYFREEVTEHECIYHKMKMAGRGVSPTQEDTDNFIKLVQEFHKKYPDRVV 120

Query: 549 GVHCTHGLNRTGYMVCRYMRDRLGMSGKEAIKKFERARGYAIERIVYTSDLL-KQNPAID 725
           GVHCTHG NRTG+++  Y+          AI +F   R   I +  Y  DL  + +P  D
Sbjct: 121 GVHCTHGFNRTGFLIAAYLFQVEEYGLDAAIGEFAENRQKGIYKQDYIDDLFARYDPTED 180


>Z75525-6|CAA99765.2|  623|Caenorhabditis elegans Hypothetical
           protein C03D6.3a protein.
          Length = 623

 Score = 83.4 bits (197), Expect = 3e-16
 Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
 Frame = +3

Query: 207 LPDRWIKYNACGRVIEGTRIICFKVPLXXXXXXXXXXXXXIWDIPALLEAIP-----KLG 371
           LPDRW+     G +I       FK PL              +  PA + + P     K+G
Sbjct: 15  LPDRWLHCPKTGTLINNL-FFPFKTPLCKMYDNQIAERRYQFH-PAEVFSHPHLHGKKIG 72

Query: 372 AVIDLTNTDKYYKPEDVKAAGILHKKIIMPGR-ILPPENKVKEFMDAVDDFLGKDSDILL 548
             IDLTNTD+YY  E+V     ++ K+ M GR + P +     F+  V +F  K  D ++
Sbjct: 73  LWIDLTNTDRYYFREEVTEHECIYHKMKMAGRGVSPTQEDTDNFIKLVQEFHKKYPDRVV 132

Query: 549 GVHCTHGLNRTGYMVCRYMRDRLGMSGKEAIKKFERARGYAIERIVYTSDLL-KQNPAID 725
           GVHCTHG NRTG+++  Y+          AI +F   R   I +  Y  DL  + +P  D
Sbjct: 133 GVHCTHGFNRTGFLIAAYLFQVEEYGLDAAIGEFAENRQKGIYKQDYIDDLFARYDPTED 192


>AF003925-1|AAB61344.1|  573|Caenorhabditis elegans mRNA capping
           enzyme protein.
          Length = 573

 Score = 83.4 bits (197), Expect = 3e-16
 Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
 Frame = +3

Query: 207 LPDRWIKYNACGRVIEGTRIICFKVPLXXXXXXXXXXXXXIWDIPALLEAIP-----KLG 371
           LPDRW+     G +I       FK PL              +  PA + + P     K+G
Sbjct: 3   LPDRWLHCPKTGTLINNL-FFPFKTPLCKMYDNQIAERRYQFH-PAEVFSHPHLHGKKIG 60

Query: 372 AVIDLTNTDKYYKPEDVKAAGILHKKIIMPGR-ILPPENKVKEFMDAVDDFLGKDSDILL 548
             IDLTNTD+YY  E+V     ++ K+ M GR + P +     F+  V +F  K  D ++
Sbjct: 61  LWIDLTNTDRYYFREEVTEHECIYHKMKMAGRGVSPTQEDTDNFIKLVQEFHKKYPDRVV 120

Query: 549 GVHCTHGLNRTGYMVCRYMRDRLGMSGKEAIKKFERARGYAIERIVYTSDLL-KQNPAID 725
           GVHCTHG NRTG+++  Y+          AI +F   R   I +  Y  DL  + +P  D
Sbjct: 121 GVHCTHGFNRTGFLIAAYLFQVEEYGLDAAIGEFAENRQKGIYKQDYIDDLFARYDPTED 180


>AF125960-3|AAD14737.1|  446|Caenorhabditis elegans Hypothetical
           protein T12B3.1 protein.
          Length = 446

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 26/91 (28%), Positives = 41/91 (45%)
 Frame = +3

Query: 405 YKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNRTG 584
           Y PE++   GI H    +P       N++ + +  VD  L       + VHC  G  RTG
Sbjct: 129 YDPENLMRNGIYHYNFPLPDFQACTPNRLLDIVKVVDFALSHGK---IAVHCHAGHGRTG 185

Query: 585 YMVCRYMRDRLGMSGKEAIKKFERARGYAIE 677
            ++  +M   LGMS  +A+      R  A++
Sbjct: 186 MVIAAWMMYALGMSPSQAVDTVRSRRAKAVQ 216


>U28739-7|AAB93458.1|  681|Caenorhabditis elegans Cell division
           cycle related protein14, isoform c protein.
          Length = 681

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>U28739-6|AAM54206.1|  695|Caenorhabditis elegans Cell division
           cycle related protein14, isoform d protein.
          Length = 695

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>U28739-5|AAT68903.1|  707|Caenorhabditis elegans Cell division
           cycle related protein14, isoform e protein.
          Length = 707

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>U28739-4|AAM54205.1|  693|Caenorhabditis elegans Cell division
           cycle related protein14, isoform a protein.
          Length = 693

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
           cycle related protein14, isoform b protein.
          Length = 1063

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>AY661747-1|AAT74546.1|  707|Caenorhabditis elegans CDC-14
           phosphatase isoform E protein.
          Length = 707

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>AY661746-1|AAT74545.1|  695|Caenorhabditis elegans CDC-14
           phosphatase isoform D protein.
          Length = 695

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>AY661745-1|AAT74544.1|  681|Caenorhabditis elegans CDC-14
           phosphatase isoform C protein.
          Length = 681

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
           phosphatase isoform B protein.
          Length = 1063

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>AY661743-1|AAT74542.1|  693|Caenorhabditis elegans CDC-14
           phosphatase isoform A protein.
          Length = 693

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>AF000363-1|AAB94407.1|  681|Caenorhabditis elegans protein
           phosphatase CDC14 protein.
          Length = 681

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +3

Query: 399 KYYKPEDVKAAGILHKKIIMPGRILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNR 578
           K Y       AG  H  +       P +  + +F+  VD+  G      + VHC  GL R
Sbjct: 247 KNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLGR 301

Query: 579 TGYMVCRYMRDRLGMSGKEAI 641
           TG ++  +M    G++  E +
Sbjct: 302 TGTLIACWMMKEYGLTAGECM 322


>AJ131181-1|CAA10315.1|  962|Caenorhabditis elegans DAF-18 protein
           protein.
          Length = 962

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 498 FMDAVDDFLGKDSDILLGVHCTHGLNRTGYMVC 596
           F     ++L  D   ++ VHC  G  RTG M+C
Sbjct: 149 FCREAKEWLEADDKHVIAVHCKAGKGRTGVMIC 181


>AF126286-1|AAD21620.1|  962|Caenorhabditis elegans PTEN
           phosphatidylinositol 3' phosphatasehomolog DAF-18
           protein.
          Length = 962

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 498 FMDAVDDFLGKDSDILLGVHCTHGLNRTGYMVC 596
           F     ++L  D   ++ VHC  G  RTG M+C
Sbjct: 149 FCREAKEWLEADDKHVIAVHCKAGKGRTGVMIC 181


>AF098286-1|AAD03420.1|  962|Caenorhabditis elegans DAF-18 protein.
          Length = 962

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 498 FMDAVDDFLGKDSDILLGVHCTHGLNRTGYMVC 596
           F     ++L  D   ++ VHC  G  RTG M+C
Sbjct: 149 FCREAKEWLEADDKHVIAVHCKAGKGRTGVMIC 181


>AF036706-19|AAK39284.1|  962|Caenorhabditis elegans Abnormal dauer
           formation protein 18 protein.
          Length = 962

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 498 FMDAVDDFLGKDSDILLGVHCTHGLNRTGYMVC 596
           F     ++L  D   ++ VHC  G  RTG M+C
Sbjct: 149 FCREAKEWLEADDKHVIAVHCKAGKGRTGVMIC 181


>Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical
           protein F55C5.4 protein.
          Length = 1010

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 468 ILPPENKVKEFMDAVDDFLGKDSDILLGVHCTHGLNRTGYM 590
           +L P+N VKE M  + D + KD+ + + V    GLN   ++
Sbjct: 255 LLIPKNIVKELMGYIIDTVAKDTVVSVRVAVFEGLNEMAFV 295


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,129,393
Number of Sequences: 27780
Number of extensions: 446767
Number of successful extensions: 1086
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3432936682
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -