Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_N16
(1252 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 85 7e-17
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 48 2e-05
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 34 0.18
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 30 3.0
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 30 3.9
Z69903-2|CAA93774.1| 364|Caenorhabditis elegans Hypothetical pr... 29 5.2
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 29 5.2
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 29 5.2
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 29 5.2
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 29 5.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 6.9
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 29 6.9
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 6.9
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 9.1
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 85.4 bits (202), Expect = 7e-17
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 2/219 (0%)
Frame = +1
Query: 124 FYPYG-PELDQRLPRGSEVPSPEVTLNVPIVFYDETYETVFVNNHGVLTFRADLPQFINT 300
FYPYG P D RL E + + L +P+ + +++ + +F++++G++ P+ I
Sbjct: 25 FYPYGQPAGDNRLDYSMEQSA--IALKIPLTYMEQSVDELFLSHNGIVGLGKPTPEKIGG 82
Query: 301 EFPLPYPAIAAFYSNVDTTDEGAIYYR-ETNESHILSKAEESVQNNFHDYYDFRPTSVFI 477
+ PAIA FY V + G I YR +++ +L+K + V+ F D +F I
Sbjct: 83 LMTISTPAIAVFYVPVTS---GVIDYRVSSDDQGLLTKLTQDVKQVFADAVEFHGLQAVI 139
Query: 478 TTWLDVTYTSTLHDRKNSYQVAVISNGTESFVELLYPEREIQWIQKETDALSLPDAKAQA 657
TW + + D S+Q+A++S+G ++ Y + W S AQA
Sbjct: 140 ITWTQI--ENAEKDGPASFQLAIVSDGISTYAIFRY--ESLPW-------SSSMGYYAQA 188
Query: 658 GFVAEDGRVFTLRGSGSHQIRNIISWTNTHEPGKYVFRV 774
GFV G++ T SG ++ +++ +N ++FRV
Sbjct: 189 GFVRSIGKIQTNVNSGGPDVKELVNLSNNQFGNFFIFRV 227
Score = 30.3 bits (65), Expect = 3.0
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +3
Query: 882 CHMQARCVXYXAGICCQCSEGSTGTENHALKR 977
CH + C + G CC C G G L +
Sbjct: 368 CHANSVCQDFEGGFCCNCDTGFYGNGKECLPK 399
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
protein B0393.5 protein.
Length = 1106
Score = 47.6 bits (108), Expect = 2e-05
Identities = 39/156 (25%), Positives = 71/156 (45%)
Frame = +1
Query: 307 PLPYPAIAAFYSNVDTTDEGAIYYRETNESHILSKAEESVQNNFHDYYDFRPTSVFITTW 486
P+ P IA F+ G ++YRET++ +I++ A V + FR SV + TW
Sbjct: 35 PVEEPTIAVFWQPATL---GNVWYRETSDINIMNLAHNEVNIQYRYGAQFRVRSVVLITW 91
Query: 487 LDVTYTSTLHDRKNSYQVAVISNGTESFVELLYPEREIQWIQKETDALSLPDAKAQAGFV 666
V N++Q+A+I + +F +Y + + T+A+ AGF
Sbjct: 92 EGVKDPLVPESEGNTFQLALIIGDSMTFAHFIYSK-----LNFNTNAI--------AGFS 138
Query: 667 AEDGRVFTLRGSGSHQIRNIISWTNTHEPGKYVFRV 774
D ++L S ++ + ++ PG+++FRV
Sbjct: 139 TRDSS-YSLPDSATNDAILLSEKSDIGIPGEWLFRV 173
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
protein K03H1.5 protein.
Length = 1385
Score = 34.3 bits (75), Expect = 0.18
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Frame = +1
Query: 400 ILSKAEESVQNNFHDYYDFRPTSVFITTW-----------LDVTYTSTLHDRKNSYQVAV 546
+L +Q+ + FR FI TW LDV+ + D +N++QV +
Sbjct: 310 LLDNITRHIQDGYTGANGFRAEHAFIATWYRMAHGGAARALDVSQFEHVKDWQNTFQVVL 369
Query: 547 ISNGTESFVELLYPEREIQWI-QKETDALSLPDAK--AQAGFVAEDGR-VFTLRGSGSHQ 714
S+ +F ++ + W E L K A AGF +G + L SG +
Sbjct: 370 ASDEIRTFA--IFNYARLNWTSSNEAGGLDGFGGKQAAMAGFNGGNGTGWYGLPYSGEGR 427
Query: 715 IRNIISWTNTHEPGKYVFRVGTI 783
+ + ++N PG+++ RV +
Sbjct: 428 LWKLGYFSNVLTPGRWIHRVDEV 450
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 837 NCGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTG 953
NC QN+ +S C A+C+ G C+C++G G
Sbjct: 98 NCD--QNIDECAASPCQNDAKCIDEINGYMCECADGYEG 134
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +3
Query: 840 CGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTGTENHALKRRTSXSTRKTEWSS 1016
C V E+ C ++A CV G C+C EG G + +R+ S + SS
Sbjct: 249 CEDVNECGSEKLHKCDVRADCVNTIGGYECECEEGFEG-DGKNCQRKCGHSVKLPSKSS 306
>Z69903-2|CAA93774.1| 364|Caenorhabditis elegans Hypothetical
protein F46F2.4 protein.
Length = 364
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +1
Query: 451 DFRPTSVFITTWLDVTYTSTLHDRKNSYQVAVISNGTESFVELLYPEREIQWIQKETDAL 630
D++ T++F+T+ L + T + K Q G E+ L+Y +R +Q K L
Sbjct: 74 DWQTTAIFLTSCLHLNGTFAVFSEKLGIQYI----GDETLSHLIYLQRLLQQCMKHCRDL 129
Query: 631 SLP 639
S+P
Sbjct: 130 SIP 132
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 837 NCGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTG 953
NC V + S++CH A C C C EG +G
Sbjct: 406 NCEDVDECKTN-STICHKNAICTNTPGRYFCMCKEGFSG 443
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 29.5 bits (63), Expect = 5.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 837 NCGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTG 953
NC V + S++CH A C C C EG +G
Sbjct: 406 NCEDVDECKTN-STICHKNAICTNTPGRYFCMCKEGFSG 443
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 5.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 876 SVCHMQARCVXYXAGICCQCSEGSTGT 956
+ CH A+CV G C+C+ G T
Sbjct: 81 NACHKDAQCVDLAEGYTCRCNSGFADT 107
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 29.5 bits (63), Expect = 5.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 876 SVCHMQARCVXYXAGICCQCSEGSTGT 956
+ CH A+CV G C+C+ G T
Sbjct: 81 NACHKDAQCVDLAEGYTCRCNSGFADT 107
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 882 CHMQARCVXYXAGICCQCSEGSTGT 956
CH +ARCV G C C EG T
Sbjct: 429 CHPEARCVDALIGYECLCREGYLDT 453
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = +3
Query: 840 CGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTGTENHALKRRTSXSTRKTEWSSE 1019
C + N + C ARC+ G CQC +G + K T SE
Sbjct: 1117 CKELINECASSDNECSPYARCIDATNGYACQCLDGFIDVSSRYNKPPGRQCTNSNNECSE 1176
Query: 1020 *RALNDVD 1043
++LN D
Sbjct: 1177 -KSLNTCD 1183
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 819 Q*DRN*NCGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEG 944
Q D + +C + + + CH A C+ G CQC +G
Sbjct: 2104 QRDSSGSCSIINECLFTQLNDCHTAADCIDQVQGYTCQCRDG 2145
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 882 CHMQARCVXYXAGICCQCSEGSTGT 956
CH +ARCV G C C EG T
Sbjct: 429 CHPEARCVDALIGYECLCREGYLDT 453
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = +3
Query: 840 CGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTGTENHALKRRTSXSTRKTEWSSE 1019
C + N + C ARC+ G CQC +G + K T SE
Sbjct: 1117 CKELINECASSDNECSPYARCIDATNGYACQCLDGFIDVSSRYNKPPGRQCTNSNNECSE 1176
Query: 1020 *RALNDVD 1043
++LN D
Sbjct: 1177 -KSLNTCD 1183
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 819 Q*DRN*NCGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEG 944
Q D + +C + + + CH A C+ G CQC +G
Sbjct: 2104 QRDSSGSCSIINECLFTQLNDCHTAADCIDQVQGYTCQCRDG 2145
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 849 VQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTG 953
+Q+ + S CH +C+ + + C+CS G G
Sbjct: 200 IQDKKQCTSDYCHNNGQCISTGSDLSCKCSPGFDG 234
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 882 CHMQARCVXYXAGICCQCSEGSTGT 956
CH +ARCV G C C EG T
Sbjct: 429 CHPEARCVDALIGYECLCREGYLDT 453
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = +3
Query: 840 CGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTGTENHALKRRTSXSTRKTEWSSE 1019
C + N + C ARC+ G CQC +G + K T SE
Sbjct: 1117 CKELINECASSDNECSPYARCIDATNGYACQCLDGFIDVSSRYNKPPGRQCTNSNNECSE 1176
Query: 1020 *RALNDVD 1043
++LN D
Sbjct: 1177 -KSLNTCD 1183
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 819 Q*DRN*NCGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEG 944
Q D + +C + + + CH A C+ G CQC +G
Sbjct: 2104 QRDSSGSCSIINECLFTQLNDCHTAADCIDQVQGYTCQCRDG 2145
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1
Query: 298 TEFPLPYPAIAAFYSNVDTTDEGAIYYRETNESHILSKAEESVQNNF 438
T P+ P+ + F+SN D ++EG + T++ + + A +++F
Sbjct: 939 TSEPMLPPSESGFFSNKDASNEGGVSRDATDDPFVTTVASSEKRSSF 985
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = +3
Query: 840 CGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTGTENHALKRRTSXSTRKTEWSSE 1019
C + N + C ARC+ G CQC +G + K T SE
Sbjct: 533 CKELINECASSDNECSPYARCIDATNGYACQCLDGFIDVSSRYNKPPGRQCTNSNNECSE 592
Query: 1020 *RALNDVD 1043
++LN D
Sbjct: 593 -KSLNTCD 599
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 819 Q*DRN*NCGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEG 944
Q D + +C + + + CH A C+ G CQC +G
Sbjct: 1520 QRDSSGSCSIINECLFTQLNDCHTAADCIDQVQGYTCQCRDG 1561
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = +3
Query: 840 CGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEGSTGTENHALKRRTSXSTRKTEWSSE 1019
C + N + C ARC+ G CQC +G + K T SE
Sbjct: 533 CKELINECASSDNECSPYARCIDATNGYACQCLDGFIDVSSRYNKPPGRQCTNSNNECSE 592
Query: 1020 *RALNDVD 1043
++LN D
Sbjct: 593 -KSLNTCD 599
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 819 Q*DRN*NCGRVQNVRPERSSVCHMQARCVXYXAGICCQCSEG 944
Q D + +C + + + CH A C+ G CQC +G
Sbjct: 1520 QRDSSGSCSIINECLFTQLNDCHTAADCIDQVQGYTCQCRDG 1561
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,569,889
Number of Sequences: 27780
Number of extensions: 514604
Number of successful extensions: 1607
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3474674514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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