Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N16
         (1252 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    27   0.45 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          26   0.79 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      26   0.79 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   5.6  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   7.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   9.7  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 26.6 bits (56), Expect = 0.45
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 595 EIQWIQKETDALSLPDAKAQAGFVAEDGRVFTLRGSGSHQIRNIISWT 738
           EI  I+K +D  +          V E   V + + SG  ++RNI+ WT
Sbjct: 416 EIPPIRKISDCSTTSSLSGDESDVVELQPVKSSKSSGWRKLRNIVHWT 463


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 25.8 bits (54), Expect = 0.79
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 641 TLKPKLVSWRRTAASSPFVARAVIKSEILY 730
           TL+P   S  R ++ SPF    ++ S+I Y
Sbjct: 551 TLRPGSNSIERQSSESPFTTSTIMPSDIFY 580


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.8 bits (54), Expect = 0.79
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 641 TLKPKLVSWRRTAASSPFVARAVIKSEILY 730
           TL+P   S  R ++ SPF    ++ S+I Y
Sbjct: 551 TLRPGSNSIERQSSESPFTTSTIMPSDIFY 580


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 556 GTESFVELL-YPEREIQWIQKET-DALSLPDAKAQAGFVAEDGRVFTLRGSGSHQIRNII 729
           G + ++ LL  P+  ++W +  + D LS   ++  + +  +       + SG  ++RNI+
Sbjct: 170 GYQQYLRLLEVPQINLEWGEGSSGDDLS---SEWDSDYTDKSNEKKIPKSSGWRKLRNIV 226

Query: 730 SWT 738
            WT
Sbjct: 227 HWT 229


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +3

Query: 582 ISGERDPVDSERDGCTVAAGR*SPSWFRGGGR----PRLHPSWLGQSSNQKYYIMD 737
           ++G R    + ++G     G+ +  WFR G R    P L     G S+ +  +++D
Sbjct: 1   MTGSRSSEINPKEGLYDEGGKHTVHWFRKGLRLHDNPSLREGLAGASTFRCVFVLD 56


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 694 RGSGSHQIRNIISWT 738
           + SG  ++RNI+ WT
Sbjct: 130 KSSGWRKLRNIVHWT 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 301,728
Number of Sequences: 438
Number of extensions: 7213
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42742428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)