Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N15
         (1242 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0128 - 31879286-31879381,31879463-31879574,31879680-318797...   266   2e-71
05_01_0418 - 3288844-3288990,3289256-3289332,3289578-3289653,329...    35   0.12 
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541...    34   0.20 
03_06_0371 + 33435936-33436472,33436554-33436741,33437146-334372...    31   1.9  
04_04_1275 + 32321161-32321285,32321849-32322071,32322187-323223...    29   7.6  

>03_06_0128 -
           31879286-31879381,31879463-31879574,31879680-31879747,
           31880959-31881072,31881207-31881247,31881340-31881393,
           31881785-31881866,31882063-31882116
          Length = 206

 Score =  266 bits (653), Expect = 2e-71
 Identities = 116/129 (89%), Positives = 126/129 (97%)
 Frame = +2

Query: 389 INYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERKDGSRRTT 568
           INYPFEKGPLSPRFRGEHALRRYP+GEERCIACKLCEAICPAQAITIEAEER+DGSRRTT
Sbjct: 78  INYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTT 137

Query: 569 RYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEIAS 748
           RYDIDMTKCIYCGFCQEACPVDAIVEGPNFEF+TETHEELLY+KEKLL NGD+WE+EIA+
Sbjct: 138 RYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAA 197

Query: 749 NIRADHLYR 775
           N+ ++ LYR
Sbjct: 198 NLESESLYR 206


>05_01_0418 -
           3288844-3288990,3289256-3289332,3289578-3289653,
           3290125-3290220,3290307-3290376,3290474-3290564,
           3290753-3290822,3290908-3291044,3291313-3291465,
           3291816-3291864,3292205-3292366
          Length = 375

 Score = 35.1 bits (77), Expect = 0.12
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
 Frame = +2

Query: 488 KLCEAICPAQAITIEA----EE--RKDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 640
           K CE +CPA AI +E     EE  + D S       +   +C  CG C   CP D I
Sbjct: 134 KPCEKVCPADAILLERVMIEEEHSQSDPSCGKLEGGVITERCYGCGRCLSVCPYDRI 190


>02_02_0464 -
           10552347-10552466,10552683-10552928,10553866-10554135,
           10554231-10554413,10554493-10554688,10554775-10555079,
           10555515-10555604,10555689-10555806,10555991-10556088,
           10556187-10556272,10557622-10557736
          Length = 608

 Score = 34.3 bits (75), Expect = 0.20
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +2

Query: 467 EERCIACKL---CEAICPAQAITIEAEERKDGSRRTTRYDIDMTKCIYCGFCQEACPVDA 637
           E+RC   K    C   CP  A   +  E    SR +    I    CI CG C + CP DA
Sbjct: 17  EDRCRPSKCGQQCRKRCPVNATGRQCIEVTPSSRVSL---ISEELCIGCGICVKVCPFDA 73

Query: 638 I 640
           I
Sbjct: 74  I 74



 Score = 29.9 bits (64), Expect = 4.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 467 EERCIACKLCEAICPAQAITI 529
           EE CI C +C  +CP  AI I
Sbjct: 56  EELCIGCGICVKVCPFDAIQI 76


>03_06_0371 +
           33435936-33436472,33436554-33436741,33437146-33437245,
           33437360-33437545,33438977-33439186,33439772-33439959,
           33440083-33440341
          Length = 555

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +2

Query: 188 AQYSSSSEGNVEKVYPQNIPGYKYVNAEEQDMSFRAMSDRAAQTMFWT-ELARGFAVTLA 364
           A Y S  + N+   YP++ P YK +   ++   F  + D +  T+F   +L  G+ V + 
Sbjct: 189 ASYPSVVQNNILWFYPRSEPEYKEILQRKRPPYFPDLDDPSFNTVFGVRDLFYGYDVLVE 248

Query: 365 HIFKEPATINY 397
           ++  +PA + Y
Sbjct: 249 NLM-DPAHVPY 258


>04_04_1275 +
           32321161-32321285,32321849-32322071,32322187-32322309,
           32322391-32322519,32322939-32323024,32323233-32323356,
           32323531-32323579,32323808-32323890,32323975-32324042,
           32324187-32324264,32324460-32324547,32324640-32324756,
           32324844-32325176
          Length = 541

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +2

Query: 656 FEFSTETHEELLY----NKEKLLSNGDKWESEIASNIR 757
           F+ S E  E++L+    N EKL SNGD    +I SN+R
Sbjct: 118 FDLSEEAPEKVLHRLYCNFEKLKSNGDPIAFQIQSNLR 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,112,226
Number of Sequences: 37544
Number of extensions: 490906
Number of successful extensions: 1070
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3829445508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)