Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N15
         (1242 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    28   0.65 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            27   1.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   6.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   6.0  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 27.9 bits (59), Expect = 0.65
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +3

Query: 189 HSTAHHQKEMLRRFTHRTYLDINM*MQRNKTCLSGLCQI 305
           H TA H    L+RF   TYL I+M +Q     L+GLC++
Sbjct: 511 HYTARHPIGSLKRFGFHTYL-IDM-VQGPYPVLNGLCKL 547


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -1

Query: 246  GMFCG*TFSTFPSDDELYCARFTITPLTPDARTRDETENI 127
            G+F        P DD L   +  +TP TP A T   TE I
Sbjct: 1057 GLFMKQLQGAAPVDDRLELIKPQVTPATPPALTTPPTEPI 1096


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 716 NGDKWESEIASNIRADHLYR 775
           +GDKW+  IAS  R   LYR
Sbjct: 295 DGDKWDELIASGPRGLCLYR 314


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +2

Query: 587 TKCIYC-GFCQEACPVDAIVEGPN 655
           ++C+ C G C + CP + IV   N
Sbjct: 289 SECVPCKGVCPKTCPGEGIVHSDN 312


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,047,410
Number of Sequences: 2352
Number of extensions: 20605
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 141835209
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)