Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N11
         (1269 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...    81   1e-15
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...    81   2e-15
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    77   2e-14
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...    76   5e-14

>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 39/95 (41%), Positives = 52/95 (54%)
 Frame = +3

Query: 267 YSDVASRPFFPGLVXYMSSGPVVPMVWEGLXVVXXGRRXTXAXNPADSXPXTXXRDLCIL 446
           Y+D++S+PFF GLV Y+ SGPVV MVWEG  VV  GR+   A NP  + P T   D  + 
Sbjct: 51  YADLSSKPFFGGLVEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVD 110

Query: 447 LGRXIXXGXXTXXXXXXEIXLWXTDXXXXGAVHQH 551
           +GR +  G  +      EI LW  +       +QH
Sbjct: 111 IGRNVIHGSDSVENARKEIALWFPEGIAEWRSNQH 145



 Score = 41.1 bits (92), Expect = 0.002
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = +1

Query: 136 IMVRPDGVQRGXVGTIMERXEKKGIKQXGLKFV 234
           IM++PDGVQRG +G ++ R EKKG     +K +
Sbjct: 8   IMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLI 40


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 37/82 (45%), Positives = 48/82 (58%)
 Frame = +3

Query: 267 YSDVASRPFFPGLVXYMSSGPVVPMVWEGLXVVXXGRRXTXAXNPADSXPXTXXRDLCIL 446
           Y+D++ +PFFPGLV Y+ SGPVV MVWEG  VV  GRR   A  P ++ P T   D  + 
Sbjct: 49  YADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVE 108

Query: 447 LGRXIXXGXXTXXXXXXEIXLW 512
           +GR +  G  +      EI LW
Sbjct: 109 VGRNVIHGSDSVDNGKKEIALW 130



 Score = 46.4 bits (105), Expect = 5e-05
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = +1

Query: 136 IMVRPDGVQRGXVGTIMERXEKKGIKQXGLKFV 234
           IM++PDGVQRG +G I+ R EKKG    G+KF+
Sbjct: 6   IMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFM 38


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 35/82 (42%), Positives = 45/82 (54%)
 Frame = +3

Query: 267 YSDVASRPFFPGLVXYMSSGPVVPMVWEGLXVVXXGRRXTXAXNPADSXPXTXXRDLCIL 446
           Y D+  +PFFPGL+ Y++SGPVV M WEG  VV   R+   A NP  + P T   DL + 
Sbjct: 50  YKDLKEKPFFPGLIEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQ 109

Query: 447 LGRXIXXGXXTXXXXXXEIXLW 512
            GR +  G  +      EI LW
Sbjct: 110 TGRNVVHGSDSPDNGKREIALW 131



 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/31 (64%), Positives = 23/31 (74%)
 Frame = +1

Query: 136 IMVRPDGVQRGXVGTIMERXEKKGIKQXGLK 228
           IM++PDGVQRG VG I+ R EKKG    GLK
Sbjct: 7   IMIKPDGVQRGLVGEIISRFEKKGFVLKGLK 37


>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score = 76.2 bits (179), Expect = 5e-14
 Identities = 36/82 (43%), Positives = 46/82 (56%)
 Frame = +3

Query: 267 YSDVASRPFFPGLVXYMSSGPVVPMVWEGLXVVXXGRRXTXAXNPADSXPXTXXRDLCIL 446
           Y D+  RPFF GL  ++SSGPV+ MVWEG  V+  GR+   A +P  S P T   DL ++
Sbjct: 93  YHDLKDRPFFNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVV 152

Query: 447 LGRXIXXGXXTXXXXXXEIXLW 512
           +GR I  G         EI LW
Sbjct: 153 VGRNIIHGSDGPETAKAEIGLW 174



 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +1

Query: 127 RXXIMVRPDGVQRGXVGTIMERXEKKGIKQXGLKFVWPS 243
           R  I ++PDGVQRG +  I+ R E+KG K   +K V PS
Sbjct: 47  RTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPS 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,212,320
Number of Sequences: 37544
Number of extensions: 152819
Number of successful extensions: 221
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3934202376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)