Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_N10
(1305 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0546 + 4024793-4025025,4026259-4026372,4026482-4026577,402... 197 1e-50
10_08_1050 - 22559518-22559613,22559736-22559846,22559966-225600... 184 1e-46
10_07_0037 - 12239296-12239367,12239484-12239606,12239699-122397... 111 2e-24
08_01_0784 + 7600691-7601055,7601530-7601765,7601896-7602068,760... 111 2e-24
08_01_0407 - 3613417-3613506,3613603-3613713,3613789-3613857,361... 77 5e-23
11_01_0129 - 1073002-1073073,1073463-1073585,1073667-1073732,107... 84 2e-16
08_02_1605 - 28166338-28166418,28166496-28166567,28166655-281667... 29 6.1
02_01_0270 + 1793776-1793943,1794233-1794308,1795400-1795407,179... 29 8.1
>02_01_0546 +
4024793-4025025,4026259-4026372,4026482-4026577,
4026780-4026822,4026958-4027098,4027235-4027315,
4028032-4028130,4028225-4028350
Length = 310
Score = 197 bits (481), Expect = 1e-50
Identities = 86/142 (60%), Positives = 106/142 (74%), Gaps = 2/142 (1%)
Frame = +1
Query: 574 GRKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERY 753
GR +RVY+DGIYD+FH GHA+ L+QAK +FPN YL+VG C+D+LTH KGRTVMTEDERY
Sbjct: 50 GRPIRVYADGIYDLFHFGHAKSLEQAKRLFPNTYLLVGCCNDELTHKYKGRTVMTEDERY 109
Query: 754 EAVRHCRYVDEVVRDAPWEYDEEFLEKHKIDFLAHDDIPYTTED--XEDTYAMIKAKDMF 927
E++RHC++VDEV+ DAPW EEFL KH IDF+AHD +PY D Y +K F
Sbjct: 110 ESLRHCKWVDEVIPDAPWVVTEEFLNKHNIDFVAHDSLPYADASGAGNDVYEFVKKLGKF 169
Query: 928 VATQRTEGVSTSDIVXRXVXXY 993
TQRT+G+STSDI+ R V Y
Sbjct: 170 KETQRTDGISTSDIIMRIVKDY 191
>10_08_1050 -
22559518-22559613,22559736-22559846,22559966-22560034,
22560172-22560327,22560416-22560458,22560566-22560661,
22561136-22561249,22561390-22561574
Length = 289
Score = 184 bits (448), Expect = 1e-46
Identities = 79/141 (56%), Positives = 109/141 (77%), Gaps = 2/141 (1%)
Frame = +1
Query: 577 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 756
R VRVY+DGI+D+FH GHAR L+QAK +FPN YL+VG C+D+LT+ KG+TVMT+DERYE
Sbjct: 35 RPVRVYADGIFDLFHFGHARALEQAKLLFPNTYLLVGCCNDELTNRYKGKTVMTQDERYE 94
Query: 757 AVRHCRYVDEVVRDAPWEYDEEFLEKHKIDFLAHDDIPY--TTEDXEDTYAMIKAKDMFV 930
++RHC++VDEV+ DAPW +EF++KH+ID++AHD +PY T+ D Y +K F
Sbjct: 95 SLRHCKWVDEVIPDAPWVLTQEFIDKHQIDYVAHDALPYADTSGAANDVYEFVKKIGKFK 154
Query: 931 ATQRTEGVSTSDIVXRXVXXY 993
T+RT+GVSTSD++ R + Y
Sbjct: 155 ETKRTDGVSTSDLIMRILKDY 175
>10_07_0037 -
12239296-12239367,12239484-12239606,12239699-12239758,
12239892-12240009,12240133-12240200,12240307-12240378,
12240677-12240834,12240964-12241199,12241643-12242007
Length = 423
Score = 111 bits (266), Expect = 2e-24
Identities = 59/143 (41%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Frame = +1
Query: 577 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 756
R VRVY DG +D+ H GHA L+QAK + L+VGV SD+ + KG V++ +ER
Sbjct: 67 RPVRVYMDGCFDLMHYGHANALRQAKLLGDQ--LVVGVVSDEEIVANKGPPVLSMEERLT 124
Query: 757 AVRHCRYVDEVVRDAPWEYDEEFLE----KHKIDFLAHDDIPYTTEDXEDTYAMIKAKDM 924
V ++VDEV+ +AP+E EEF+ K+ ID++ H D P D D YA+ K
Sbjct: 125 LVSGLKWVDEVIPNAPYEITEEFMNTLFNKYNIDYIIHGDDPCLLPDGTDAYALAKKVGR 184
Query: 925 FVATQRTEGVSTSDIVXRXVXXY 993
+ +RTEGVS++DIV R + +
Sbjct: 185 YKQIKRTEGVSSTDIVGRILLTF 207
Score = 83.0 bits (196), Expect = 5e-16
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = +1
Query: 562 AGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKG-RTVMT 738
A + G +V VY DG +D+FH GH L+ A+ + +L+VGV DQ R+G R +M
Sbjct: 254 APSPGARV-VYIDGAFDLFHAGHVEILRSARQL--GDFLLVGVHDDQAIRDRRGYRPIMH 310
Query: 739 EDERYEAVRHCRYVDEVVRDAPWEYDEEFLEKHKIDFLAHDDIPY-TTEDXEDTYAMIKA 915
ER +V CRYVDEV+ APWE + + I + H + ++ D+YA+ K+
Sbjct: 311 LHERTLSVLACRYVDEVIIGAPWEVSRDMITTFNISLVVHGTVTEGSSVVGIDSYAVPKS 370
Query: 916 KDMFVATQRTEGVSTSDIVXRXV 984
+F T+ ++T + R +
Sbjct: 371 MGIFQTITSTKPITTVSVATRII 393
>08_01_0784 +
7600691-7601055,7601530-7601765,7601896-7602068,
7602344-7602430,7602538-7602605,7602732-7602849,
7602983-7603042,7603135-7603257,7603377-7603448
Length = 433
Score = 111 bits (266), Expect = 2e-24
Identities = 59/143 (41%), Positives = 85/143 (59%), Gaps = 4/143 (2%)
Frame = +1
Query: 577 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 756
R VRVY DG +D+ H GHA L+QAK + L+VGV SD+ + KG V++ +ER
Sbjct: 67 RPVRVYMDGCFDLMHYGHANALRQAKLLGDQ--LVVGVVSDEEIVANKGPPVLSMEERLT 124
Query: 757 AVRHCRYVDEVVRDAPWEYDEEFLE----KHKIDFLAHDDIPYTTEDXEDTYAMIKAKDM 924
V ++VDEV+ +AP+E EEF+ K+ ID++ H D P D D YA+ K
Sbjct: 125 LVSGLKWVDEVIPNAPYEITEEFMNTLFNKYNIDYIIHGDDPCLLPDGTDAYALAKKVGR 184
Query: 925 FVATQRTEGVSTSDIVXRXVXXY 993
+ +RTEGVS++DIV R + +
Sbjct: 185 YKQIKRTEGVSSTDIVGRILLTF 207
Score = 79.0 bits (186), Expect = 8e-15
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Frame = +1
Query: 589 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKG-RTVMTEDERYEAVR 765
VY DG +D+FH GH L+ A+ + +L+VGV DQ R+G R +M ER +V
Sbjct: 272 VYIDGAFDLFHAGHVEILRSARQL--GDFLLVGVHDDQAIRDRRGYRPIMHLHERTLSVL 329
Query: 766 HCRYVDEVVRDAPWEYDEEFLEKHKIDFLAHDDIPY-TTEDXEDTYAMIKAKDMFVATQR 942
CRYVDEV+ APWE + + I + H + ++ D YA+ K+ +F
Sbjct: 330 ACRYVDEVIIGAPWEVSRDMITTFNISLVVHGTVTEGSSVVGIDPYAVPKSMGIFQTITS 389
Query: 943 TEGVSTSDIVXRXV 984
+ ++T + R +
Sbjct: 390 PKPITTVSVATRII 403
>08_01_0407 -
3613417-3613506,3613603-3613713,3613789-3613857,
3613936-3614091,3614156-3614222,3614375-3614470,
3614976-3615142
Length = 251
Score = 76.6 bits (180), Expect(2) = 5e-23
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 10/83 (12%)
Frame = +1
Query: 775 YVDEVVRDAPWEYDEEFLEKHKIDFLAHDDIPY--TTEDXEDTY--------AMIKAKDM 924
+VDEV+ DAPW ++EFL+KH+ID++AHD +PY T+ D Y + +KA
Sbjct: 57 WVDEVIPDAPWVINQEFLDKHRIDYVAHDALPYADTSGAANDVYEFVRISESSHVKAVGK 116
Query: 925 FVATQRTEGVSTSDIVXRXVXXY 993
F T+RTEGVSTSDI+ R + Y
Sbjct: 117 FKETKRTEGVSTSDIIMRILKDY 139
Score = 50.4 bits (115), Expect(2) = 5e-23
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +1
Query: 574 GRKVRVYSDGIYDMFHQGHARQLQQAK 654
GR VRVY+DGIYD+FH GHAR L+QAK
Sbjct: 28 GRPVRVYADGIYDLFHFGHARALEQAK 54
>11_01_0129 -
1073002-1073073,1073463-1073585,1073667-1073732,
1074227-1074347,1074536-1074603,1074792-1074863,
1076045-1076222,1077554-1077888
Length = 344
Score = 84.2 bits (199), Expect = 2e-16
Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Frame = +1
Query: 577 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 756
R VRVY DG +DM H GH L+QA+ + LIVGV SD + KG V ER
Sbjct: 57 RPVRVYMDGCFDMMHYGHCNALRQARALGDE--LIVGVVSDHEITANKGPPVTPLHERLI 114
Query: 757 AVRHCRYVDEVVRDAPWEYDEEFLEK----HKIDFLAHDDIPYTTEDXEDTYAMIK 912
VR ++V +V+ DAP+ E+F+ K + ID++ H D P D D YA+ K
Sbjct: 115 MVRAVKWVHDVIPDAPYAITEDFMNKLFNEYNIDYIIHGDDPCLLPDGTDAYALAK 170
Score = 79.0 bits (186), Expect = 8e-15
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = +1
Query: 589 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKG--RTVMTEDERYEAV 762
VY DG +D+FH GH L+ A+ + +L+VG+ +DQ S +G R +M ER +V
Sbjct: 180 VYIDGAFDLFHAGHVEILRLAREL--GDFLLVGIHTDQTISSTRGPHRPIMNLHERSLSV 237
Query: 763 RHCRYVDEVVRDAPWEYDEEFLEKHKIDFLAHDDIPYTTE---DXEDTYAMIKAKDMFVA 933
CRYVDEV+ APW+ ++ + I + H I + D + YA+ +A ++
Sbjct: 238 LACRYVDEVIIGAPWDVSKDMITTFNISLVVHGTIAENMDFMKDDLNPYAVPRAMGIYRR 297
Query: 934 TQRTEGVSTSDIVXRXV 984
+ ++TS I+ R V
Sbjct: 298 LESPLDITTSTIIRRIV 314
>08_02_1605 - 28166338-28166418,28166496-28166567,28166655-28166771,
28166846-28166956,28167077-28167252,28167340-28167421,
28167662-28167808,28167887-28168252,28168558-28168741,
28169104-28169213,28169452-28169508,28169589-28169600,
28169899-28169961,28170010-28170057,28170166-28170246,
28170326-28170389,28170661-28170686,28170782-28170868,
28170942-28170969,28171194-28171255,28171364-28171576,
28171667-28171774,28171948-28172022,28172136-28172249,
28172597-28172644,28172688-28172767,28172974-28173049,
28173287-28173427,28173685-28173762,28175100-28175204,
28177061-28177147,28177287-28178579
Length = 1463
Score = 29.5 bits (63), Expect = 6.1
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -1
Query: 816 VVLPRSVSYDLINVSAMSDGFVPLIFGHNRPAFTTVRQLVTTYSYD*INIREDGFRLLQL 637
V L S D+ S SDG + + +P FTTV Q N +E+ F +
Sbjct: 1040 VGLVDSTGKDMPLTSIYSDGMLQSLTSDGQPVFTTVLQ---------FNKKEEEFIFNNI 1090
Query: 636 PRVP---LVEHVVDPVRVDPDL 580
P P L+ PVR+D DL
Sbjct: 1091 PEKPVPSLLRGYSAPVRLDSDL 1112
>02_01_0270 +
1793776-1793943,1794233-1794308,1795400-1795407,
1795778-1795837,1796300-1796421,1796613-1796685,
1796777-1796926
Length = 218
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 565 GTAGRK-VRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVC 693
G+ GR+ V G +D HQGH L +A F +++G+C
Sbjct: 29 GSGGRQYAAVVVGGTFDRLHQGHHLFL-KAAAEFARERIVIGIC 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,763,319
Number of Sequences: 37544
Number of extensions: 439865
Number of successful extensions: 1097
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4073878200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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