Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_N10
(1305 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29378-8|ABA54423.1| 354|Caenorhabditis elegans Hypothetical pr... 214 1e-55
U29378-7|AAA68722.2| 362|Caenorhabditis elegans Hypothetical pr... 214 1e-55
AC024751-2|AAN39663.1| 272|Caenorhabditis elegans Hypothetical ... 192 6e-49
AC006632-3|AAK85467.1| 183|Caenorhabditis elegans Hypothetical ... 153 2e-37
AC087079-11|AAK27869.1| 370|Caenorhabditis elegans Hypothetical... 107 2e-23
U39678-4|AAK39211.2| 330|Caenorhabditis elegans Hypothetical pr... 59 6e-09
U39678-5|ABP49528.1| 213|Caenorhabditis elegans Hypothetical pr... 46 8e-05
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 29 7.2
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 29 7.2
AF039048-7|AAB94234.2| 688|Caenorhabditis elegans Hypothetical ... 29 7.2
>U29378-8|ABA54423.1| 354|Caenorhabditis elegans Hypothetical
protein F08C6.2b protein.
Length = 354
Score = 214 bits (522), Expect = 1e-55
Identities = 98/172 (56%), Positives = 123/172 (71%), Gaps = 1/172 (0%)
Frame = +1
Query: 481 APFSTDPMALAERDSCHYGR-IPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKT 657
APFS + +A+ R++ Y + I A A A AGR VR+Y+DGIYD+FH GHA QL+Q K
Sbjct: 38 APFSDEALAITTREAVDYSKKITLAMAEANEAGRPVRIYADGIYDLFHHGHANQLRQVKK 97
Query: 658 VFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVRHCRYVDEVVRDAPWEYDEEFLEKH 837
+FPNVYLIVGVC D+ TH KGRTV +E+ERY+ VRHCRYVDEV R+APW EFL+
Sbjct: 98 MFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYDGVRHCRYVDEVYREAPWFCTVEFLKNL 157
Query: 838 KIDFLAHDDIPYTTEDXEDTYAMIKAKDMFVATQRTEGVSTSDIVXRXVXXY 993
K+DF+AHD IPY ED Y + + MF+ T+RTEGVSTSD+V R + Y
Sbjct: 158 KVDFIAHDAIPYVAPGEEDLYEKFRREGMFLETERTEGVSTSDVVCRIIRDY 209
>U29378-7|AAA68722.2| 362|Caenorhabditis elegans Hypothetical
protein F08C6.2a protein.
Length = 362
Score = 214 bits (522), Expect = 1e-55
Identities = 98/172 (56%), Positives = 123/172 (71%), Gaps = 1/172 (0%)
Frame = +1
Query: 481 APFSTDPMALAERDSCHYGR-IPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKT 657
APFS + +A+ R++ Y + I A A A AGR VR+Y+DGIYD+FH GHA QL+Q K
Sbjct: 46 APFSDEALAITTREAVDYSKKITLAMAEANEAGRPVRIYADGIYDLFHHGHANQLRQVKK 105
Query: 658 VFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVRHCRYVDEVVRDAPWEYDEEFLEKH 837
+FPNVYLIVGVC D+ TH KGRTV +E+ERY+ VRHCRYVDEV R+APW EFL+
Sbjct: 106 MFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYDGVRHCRYVDEVYREAPWFCTVEFLKNL 165
Query: 838 KIDFLAHDDIPYTTEDXEDTYAMIKAKDMFVATQRTEGVSTSDIVXRXVXXY 993
K+DF+AHD IPY ED Y + + MF+ T+RTEGVSTSD+V R + Y
Sbjct: 166 KVDFIAHDAIPYVAPGEEDLYEKFRREGMFLETERTEGVSTSDVVCRIIRDY 217
>AC024751-2|AAN39663.1| 272|Caenorhabditis elegans Hypothetical
protein Y18H1A.11 protein.
Length = 272
Score = 192 bits (467), Expect = 6e-49
Identities = 89/172 (51%), Positives = 114/172 (66%), Gaps = 1/172 (0%)
Frame = +1
Query: 481 APFSTDPMALAERDSCHYG-RIPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKT 657
APFS D + +R++ Y +I A++G R VRVY+DG+YDMFH GHA Q Q K
Sbjct: 12 APFSDDVEVIKQREAIDYSTQITLEDAISGNVTRPVRVYADGVYDMFHYGHANQFLQIKQ 71
Query: 658 VFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVRHCRYVDEVVRDAPWEYDEEFLEKH 837
PNVYLIVGVCSD+ T KGRTV E+ERYEA+RHCRYVDEV + +PW FL++
Sbjct: 72 TLPNVYLIVGVCSDEETMKNKGRTVQGEEERYEAIRHCRYVDEVYKASPWTCPIPFLKEL 131
Query: 838 KIDFLAHDDIPYTTEDXEDTYAMIKAKDMFVATQRTEGVSTSDIVXRXVXXY 993
K+DF++HD +PY ED Y + MF+ TQRTEG+STSD + R + Y
Sbjct: 132 KVDFMSHDALPYQGPAGEDIYEKHRTAGMFLETQRTEGISTSDSICRIIRDY 183
>AC006632-3|AAK85467.1| 183|Caenorhabditis elegans Hypothetical
protein F28A10.10 protein.
Length = 183
Score = 153 bits (372), Expect = 2e-37
Identities = 83/169 (49%), Positives = 106/169 (62%), Gaps = 1/169 (0%)
Frame = +1
Query: 481 APFSTDPMALAERDSCHYG-RIPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKT 657
AP + D +A+R+ Y +I A G + R +RVY+DGIYDMFH GHA+QL Q K
Sbjct: 7 APLTDDSTVIAKRNLIDYSEKISMENARNGLSSRPIRVYADGIYDMFHYGHAKQLLQIKQ 66
Query: 658 VFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVRHCRYVDEVVRDAPWEYDEEFLEKH 837
+FP VYLIVGVCSD+ T KG TV +E+ERYE+VR CRYVDEV++DAPWE +FLE+
Sbjct: 67 MFPMVYLIVGVCSDENTLKFKGPTVQSENERYESVRQCRYVDEVLKDAPWEVSVDFLEEM 126
Query: 838 KIDFLAHDDIPYTTEDXEDTYAMIKAKDMFVATQRTEGVSTSDIVXRXV 984
K+ YA KA F+ T RTEGVSTSD + + +
Sbjct: 127 KM------------------YAEHKAAGRFLETTRTEGVSTSDSICKII 157
>AC087079-11|AAK27869.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.11 protein.
Length = 370
Score = 107 bits (257), Expect = 2e-23
Identities = 59/131 (45%), Positives = 76/131 (58%)
Frame = +1
Query: 586 RVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYEAVR 765
RV++DG YDM H GHA QL+QAK LIVGV +D+ KG V E ERY V
Sbjct: 14 RVWADGCYDMVHFGHANQLRQAKQFGQK--LIVGVHNDEEIRLHKGPPVFNEQERYRMVA 71
Query: 766 HCRYVDEVVRDAPWEYDEEFLEKHKIDFLAHDDIPYTTEDXEDTYAMIKAKDMFVATQRT 945
++VDEVV +AP+ E L+K+ DF H D T D +DTY +K + +RT
Sbjct: 72 GIKWVDEVVENAPYATTVETLDKYDCDFCVHGDDITLTADGKDTYQEVKDHQRYRECKRT 131
Query: 946 EGVSTSDIVXR 978
GVST+D+V R
Sbjct: 132 CGVSTTDLVGR 142
Score = 55.6 bits (128), Expect = 7e-08
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = +1
Query: 589 VYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKG--RTVMTEDERYEAV 762
VY G +D+FH GH L++AK YLIVG+ SDQ + KG +M+ ER +V
Sbjct: 206 VYVTGSFDLFHIGHLAFLEKAKEF--GDYLIVGILSDQTVNQYKGSNHPIMSIHERVLSV 263
Query: 763 RHCRYVDEVVRDAPWEYDEEFLEKHKI 843
+ V+EVV AP+E + L++ +
Sbjct: 264 LAYKPVNEVVFGAPYEITSDILDQFNV 290
>U39678-4|AAK39211.2| 330|Caenorhabditis elegans Hypothetical
protein C39D10.3a protein.
Length = 330
Score = 59.3 bits (137), Expect = 6e-09
Identities = 33/93 (35%), Positives = 49/93 (52%)
Frame = +1
Query: 577 RKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTHSRKGRTVMTEDERYE 756
+K RVY+DG +D H +AR L AK LIVG+ SD + + T++ERY
Sbjct: 16 KKARVYTDGCFDFVHFANARLLWPAKQYGKK--LIVGIHSDDELDNNGILPIFTDEERYR 73
Query: 757 AVRHCRYVDEVVRDAPWEYDEEFLEKHKIDFLA 855
+ R+VDE DAP++ + L + D +A
Sbjct: 74 LISAIRWVDEAFEDAPFQPEMSTLNQLDCDIIA 106
Score = 45.6 bits (103), Expect = 8e-05
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +1
Query: 484 PFSTDPMALAERDSCHYGRIPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVF 663
P S +P+ +Y P KV VY G +D+FH GH L+ AK +
Sbjct: 145 PLSNEPVISVSLFKQNYTFAPVVIGRKPKVTDKV-VYVSGAFDLFHAGHLSFLEAAKDL- 202
Query: 664 PNVYLIVGVCSDQLTHSRKGR--TVMTEDERYEAVRHCRYVDEVVRDAPWEYDEEFL 828
YLIVG+ D + KG VM ER + + VDEV P + +F+
Sbjct: 203 -GDYLIVGIVGDDDVNEEKGTIFPVMNLLERTLNISSLKIVDEVFVGVPAVTNSKFV 258
>U39678-5|ABP49528.1| 213|Caenorhabditis elegans Hypothetical
protein C39D10.3b protein.
Length = 213
Score = 45.6 bits (103), Expect = 8e-05
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Frame = +1
Query: 484 PFSTDPMALAERDSCHYGRIPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVF 663
P S +P+ +Y P KV VY G +D+FH GH L+ AK +
Sbjct: 28 PLSNEPVISVSLFKQNYTFAPVVIGRKPKVTDKV-VYVSGAFDLFHAGHLSFLEAAKDL- 85
Query: 664 PNVYLIVGVCSDQLTHSRKGR--TVMTEDERYEAVRHCRYVDEVVRDAPWEYDEEFL 828
YLIVG+ D + KG VM ER + + VDEV P + +F+
Sbjct: 86 -GDYLIVGIVGDDDVNEEKGTIFPVMNLLERTLNISSLKIVDEVFVGVPAVTNSKFV 141
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 29.1 bits (62), Expect = 7.2
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +1
Query: 532 YGRIPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTH 711
YG IPR++ TA R+ R IY+ Q H L+ K F + + ++
Sbjct: 362 YGSIPRSSR-ERTASRRYREQQQQIYNQMPQNHNDLLEITKKYFEDYDRQLREFGERARR 420
Query: 712 SRKGRTVMTEDERYEAVRHCRYVDEVVR 795
+ R +D+ + +R + + E+ R
Sbjct: 421 HSRRRFDFHDDDDQDDMRKNQVMHELAR 448
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 29.1 bits (62), Expect = 7.2
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +1
Query: 532 YGRIPRAAALAGTAGRKVRVYSDGIYDMFHQGHARQLQQAKTVFPNVYLIVGVCSDQLTH 711
YG IPR++ TA R+ R IY+ Q H L+ K F + + ++
Sbjct: 362 YGSIPRSSR-ERTASRRYREQQQQIYNQMPQNHNDLLEITKKYFEDYDRQLREFGERARR 420
Query: 712 SRKGRTVMTEDERYEAVRHCRYVDEVVR 795
+ R +D+ + +R + + E+ R
Sbjct: 421 HSRRRFDFHDDDDQDDMRKNQVMHELAR 448
>AF039048-7|AAB94234.2| 688|Caenorhabditis elegans Hypothetical
protein F16B4.3 protein.
Length = 688
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Frame = +1
Query: 730 VMTEDERYEAVR------HCRYVDEVVRDAPWEYDEEFLEKHKIDFLAHD--DIPYTTED 885
++TED+RYEA+ HC+ + ++ EY +E LE K + +A + D+ T D
Sbjct: 437 LLTEDQRYEALELSAKCIHCKEETILSKENLIEYIDEALENTK-EIMARELGDLEELTGD 495
Query: 886 XEDTYAMIKAKDMFVATQRTEGVST 960
E+ +K K Q+ E T
Sbjct: 496 REELENFLK-KSKGETRQKLEAALT 519
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,117,851
Number of Sequences: 27780
Number of extensions: 350037
Number of successful extensions: 893
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3642337300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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