Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_N09
(1363 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 45 2e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 41 3e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.007
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.052
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.16
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.16
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.28
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.28
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.49
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.3
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 7.9
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = -1
Query: 1231 PPPXPXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXP---XXXPPXPXPXXXXXXX 1061
P P P PP P P P P PP P P PP P P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 1060 PXXXXPPPXXPPPXXXPPSPP 998
P PP P PP PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPP 1212
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = -1
Query: 1231 PPPXPXXPPPXXXPPXXXXPXPPPXXXPPXXXP--XXXXFXXPXXXPPXPXPXXXXXXXP 1058
P P P PP P P P P PP P P PP P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 1057 XXXXP-PPXXPPPXXXPPSPP 998
PP P PP PP
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPP 1193
Score = 40.7 bits (91), Expect = 5e-04
Identities = 30/114 (26%), Positives = 31/114 (27%), Gaps = 2/114 (1%)
Frame = -1
Query: 1336 PPPXPXXXSXXXXXPXXXXPXXXXXXXSXXXXXSXPPPXPXXPPPXXXPPXXXXPXPPPX 1157
PPP P S P P + P P PP P P P P
Sbjct: 1063 PPPVPAPSSEIPSIPA---PSGAPPVPAPSGIPPVPKPS-VAAPPVPKPSVAVPPVPAPS 1118
Query: 1156 XXPPXXXPXXXX--FXXPXXXPPXPXPXXXXXXXPXXXXPPPXXPPPXXXPPSP 1001
PP P P PP P P P PP P PP P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 40.3 bits (90), Expect = 6e-04
Identities = 25/83 (30%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Frame = -1
Query: 1231 PPPXPXXP-PPXXXPPXXXXPXPPPXXXPPXXXP--XXXXFXXPXXXPPXPXPXXXXXXX 1061
P P P PP P P PPP PP P P PP P P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Query: 1060 PXXXXPPPXXPPPXXXPPSPPXP 992
P P P P PS P
Sbjct: 1230 PVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/77 (29%), Positives = 23/77 (29%)
Frame = -1
Query: 1231 PPPXPXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXPXX 1052
P P P PP P P PPP PP P PP P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP-------SAGLPPVPVPTAKAPPVPAP 1242
Query: 1051 XXPPPXXPPPXXXPPSP 1001
P P PSP
Sbjct: 1243 SSEAPSVSTPRSSVPSP 1259
Score = 36.7 bits (81), Expect = 0.007
Identities = 27/113 (23%), Positives = 28/113 (24%), Gaps = 2/113 (1%)
Frame = -1
Query: 1333 PPXPXXXSXXXXXPXXXXPXXXXXXXSXXXXXSXPPPXPXXPPPXXXPPXXXXPXPPPXX 1154
PP P + P S P PPP P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 1153 XPPXXXP-XXXXFXXP-XXXPPXPXPXXXXXXXPXXXXPPPXXPPPXXXPPSP 1001
PP P P PP P P P PP P PP P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Score = 27.1 bits (57), Expect = 6.0
Identities = 19/78 (24%), Positives = 19/78 (24%)
Frame = -1
Query: 1225 PXPXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXPXXXX 1046
P P PP P P PP P P P P P
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSP-AAPLARVPPVPKLSS 1019
Query: 1045 PPPXXPPPXXXPPSPPXP 992
P P P P P P
Sbjct: 1020 KAPPVPLPSADAPPIPVP 1037
Score = 27.1 bits (57), Expect = 6.0
Identities = 18/73 (24%), Positives = 19/73 (26%)
Frame = -3
Query: 1220 PPFXPSXXXPPXXXXXXXPPXXXXPXXXXPXXXFXXPXXXPPXPXXXXXXXXXPXLXXTP 1041
PP PP P P P PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP--KPSVAAPPVPAPSSGIPPVPKPAAGV 1188
Query: 1040 PPXPPPXXXTPLP 1002
PP PPP P+P
Sbjct: 1189 PPVPPPSEAPPVP 1201
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 41.1 bits (92), Expect = 3e-04
Identities = 26/77 (33%), Positives = 27/77 (35%)
Frame = +3
Query: 999 GGEGGXXXGGGXXGGGXXKXGXXXXXXXGXGXGGXXXGXXKXXXXGXXXGGXXXGGGXGX 1178
GG GG G G GG G G G G G + G G GGG G
Sbjct: 195 GGSGGPPPGPGGFGG-FGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 1179 XXXGGXXXGGGKXGXGG 1229
G GGG G GG
Sbjct: 254 FGGGPGGFGGGPGGHGG 270
Score = 35.9 bits (79), Expect = 0.013
Identities = 28/84 (33%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Frame = +3
Query: 984 RXXGXGGEGGXXXG-GGXXGGGXXKXGXXXXXXXGXGXGGXXXGXXKXXXXGXXXGGXXX 1160
R GG GG G GG G G G GG G G G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGH--GGFGGGPGGFEGGPGGF 240
Query: 1161 GGGXGXXXXGGXXXGGGKXGXGGG 1232
GGG G G GGG G GGG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGG 264
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 36.7 bits (81), Expect = 0.007
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = -1
Query: 1231 PPPXPXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXPXX 1052
P P PP PP P P P PP P PP P P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI---PSSLPPPAQPAAPVKSPPSA 187
Query: 1051 XXPPPXXPPPXXXPPSPP 998
P PP P PP
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
Score = 28.3 bits (60), Expect = 2.6
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = -1
Query: 1210 PPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXPXXXXPPPXX 1031
PP PP PP PP P P PP P P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPR--PSIPP-PSPASAPPIPSKAPPI---PSSLPPPAQP 177
Query: 1030 PPPXXXPPSPP 998
P PPS P
Sbjct: 178 AAPVKSPPSAP 188
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = -1
Query: 1237 SXPPPXPXXPP--PXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXP 1088
S PPP P P P PP PP P P P PP P
Sbjct: 148 SIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP-SLPSAVPPMP 198
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.052
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = -1
Query: 1237 SXPPPXPXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXP 1058
S PPP P P P P P P P P PP P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 1057 XXXXPPPXXPP 1025
P P P
Sbjct: 791 RYYAPAPQAEP 801
Score = 32.3 bits (70), Expect = 0.16
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = -1
Query: 1096 PXPXPXXXXXXXPXXXXPPPXXPPP---XXXPPSPPXP 992
P P P P PPP PPP PP PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.1 bits (67), Expect = 0.37
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -1
Query: 1210 PPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXPXXXXPPPXX 1031
PPP PP P P P P P P PP P P P PPP
Sbjct: 732 PPPP--PPAVIVPTPAPAPIP--VPPPAPIMGGP---PPPPPPPGVAGAGP----PPPPP 780
Query: 1030 PPP 1022
PPP
Sbjct: 781 PPP 783
Score = 30.7 bits (66), Expect = 0.49
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 1098 PPSPXXXXXXXXXPPXXYPPPXXPPXXXXPPPPXXPP 988
PP P P P P P PPPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -3
Query: 1097 PXPXXXXXXXXXPXLXXTPPPXPPPXXXTPLPPXP 993
P P P + PPP PPP PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.16
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -1
Query: 1237 SXPP--PXPXXPPPXXXPPXXXXPXPPP 1160
S PP P P PPP PP P PPP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.37
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 1045 PPPXXPPPXXXPPSPPXP 992
PPP PPP PPS P P
Sbjct: 9 PPPPPPPPGFEPPSQPPP 26
Score = 30.3 bits (65), Expect = 0.64
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = -2
Query: 1059 PPXXYPPPXXPPXXXXP--PPPXXPP 988
PP PPP PP P PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 1219 PXXPPPXXXPPXXXXPXPPPXXXPP 1145
P PPP PP P PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.16
Identities = 27/94 (28%), Positives = 28/94 (29%), Gaps = 12/94 (12%)
Frame = -1
Query: 1237 SXPPPXPXX--------PPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXP--XXXPPXP 1088
S PPP P PPP P PP P P PP P
Sbjct: 359 SAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Query: 1087 XPXXXXXXXPXXXXPPPXXPP--PXXXPPSPPXP 992
P P PP PP P P +PP P
Sbjct: 419 TPPSLPPSAPPSL--PPSAPPSLPMGAPAAPPLP 450
Score = 31.9 bits (69), Expect = 0.21
Identities = 23/85 (27%), Positives = 24/85 (28%), Gaps = 3/85 (3%)
Frame = -1
Query: 1237 SXPPPXPXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXP 1058
S PP P P P PP P P PP P
Sbjct: 386 SNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPA 445
Query: 1057 XXXXPP--PXXPP-PXXXPPSPPXP 992
PP P PP P P +PP P
Sbjct: 446 APPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 31.1 bits (67), Expect = 0.37
Identities = 21/82 (25%), Positives = 21/82 (25%), Gaps = 6/82 (7%)
Frame = -1
Query: 1219 PXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXP------XXXPPXPXPXXXXXXXP 1058
P PP P P P PP P P PP P P
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Query: 1057 XXXXPPPXXPPPXXXPPSPPXP 992
P PP PP P P
Sbjct: 461 AGMPAAPPLPPAAPAPPPAPAP 482
Score = 30.3 bits (65), Expect = 0.64
Identities = 27/95 (28%), Positives = 28/95 (29%), Gaps = 11/95 (11%)
Frame = -1
Query: 1231 PPPXPXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXPXX 1052
PP P PP P P PPP PP P P PP P
Sbjct: 233 PPSIPSSRPPERVPSLSA-PAPPP--IPP---PSNGTVSSPPNSPPRPIAPVSMNPAINS 286
Query: 1051 XXPPPXXPPP-----------XXXPPSPPXPXXRS 980
PP PP PP PP P R+
Sbjct: 287 TSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRN 321
Score = 27.9 bits (59), Expect = 3.4
Identities = 19/77 (24%), Positives = 19/77 (24%)
Frame = -1
Query: 1228 PPXPXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXPXXX 1049
P P PPP PP P P P PP
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSR-VSAAALAANKK 309
Query: 1048 XPPPXXPPPXXXPPSPP 998
PPP PP PP
Sbjct: 310 RPPPPPPPSRRNRGKPP 326
Score = 27.5 bits (58), Expect = 4.5
Identities = 28/128 (21%), Positives = 30/128 (23%), Gaps = 1/128 (0%)
Frame = -2
Query: 1218 PXXPLPXXXPXXXXXPXPPXXXXPXXSXPXXXFFXXPXXXPPS-PXXXXXXXXXPPXXYP 1042
P P P P P PP S P P P+ P P
Sbjct: 361 PPPPPPRSAPSTGRQP-PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 1041 PPXXPPXXXXPPPPXXPPXXLXXXXTXXXFPXXXGXXXXXPXXPPXXXXXXXXYPXPFXX 862
PP PP PP PP P P P P P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 861 EXPSXXXP 838
P+ P
Sbjct: 480 PAPAPAAP 487
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/74 (25%), Positives = 20/74 (27%)
Frame = -3
Query: 1226 PXPPFXPSXXXPPXXXXXXXPPXXXXPXXXXPXXXFXXPXXXPPXPXXXXXXXXXPXLXX 1047
P PP P P PP P P PP P P
Sbjct: 418 PTPPSLPPSAPPSLPPSA--PPSLPMGAPAAPPLPPSAPIA-PPLPAGMPAAPPLPPAAP 474
Query: 1046 TPPPXPPPXXXTPL 1005
PPP P P P+
Sbjct: 475 APPPAPAPAPAAPV 488
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.5 bits (68), Expect = 0.28
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = -1
Query: 1210 PPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXP-XXXPPXPXPXXXXXXXPXXXXPPPX 1034
PPP P P PP P P P PP P P PPP
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP----PPPM 264
Query: 1033 XPPPXXXPPSPP 998
P P PP
Sbjct: 265 HHEPGEHMPPPP 276
Score = 31.5 bits (68), Expect = 0.28
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = -1
Query: 1210 PPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXP-XXXPPXPXPXXXXXXXPXXXXPPPX 1034
PPP P P PP P P P PP P P PPP
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP----PPPM 303
Query: 1033 XPPPXXXPPSPP 998
P P PP
Sbjct: 304 HHEPGEHMPPPP 315
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.28
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +3
Query: 999 GGEGGXXXGGGXXGGGXXKXGXXXXXXXGXGXGGXXXGXXKXXXXGXXXGGXXXGGGXGX 1178
GG GG G G GG G G G GG G + G G GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG--RGGRGGARGGRGGSSGGRGG 66
Query: 1179 XXXG 1190
G
Sbjct: 67 AKGG 70
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +3
Query: 1083 GXGXGGXXXGXXKXXXXGXXXG-GXXXGGGXGXXXXGGXXXGGGKXGXGG 1229
G G G G G G GGG G G GG + G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.49
Identities = 27/84 (32%), Positives = 27/84 (32%)
Frame = -1
Query: 1231 PPPXPXXPPPXXXPPXXXXPXPPPXXXPPXXXPXXXXFXXPXXXPPXPXPXXXXXXXPXX 1052
P P P PP P PPP PP P P PP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPP---PPMSVP------PPPSAPPMP-------AGPPS 1729
Query: 1051 XXPPPXXPPPXXXPPSPPXPXXRS 980
PPP P PS P P RS
Sbjct: 1730 APPPPL---PASSAPSVPNPGDRS 1750
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 1059 PPXXYPPPXXPPXXXXPPPPXXPP 988
PP P PP PPPP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP 1722
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/54 (25%), Positives = 15/54 (27%)
Frame = -2
Query: 1149 PXXSXPXXXFFXXPXXXPPSPXXXXXXXXXPPXXYPPPXXPPXXXXPPPPXXPP 988
P P P P+ PP P P PPPP PP
Sbjct: 143 PASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 24.2 bits (50), Expect(2) = 3.3
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = -1
Query: 1228 PPXPXXPPPXXXPPXXXXPXPPPXXXPP 1145
P P P P P PPP PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 21.8 bits (44), Expect(2) = 3.3
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -1
Query: 1030 PPPXXXPPSPPXP 992
PPP P PP P
Sbjct: 273 PPPPATPSQPPRP 285
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +3
Query: 993 GXGGEGGXXXGGGXXGGGXXKXGXXXXXXXGXGXGGXXXGXXKXXXXGXXXGGXXXG 1163
G G GG G GG G G G G G + G GG G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,918,549
Number of Sequences: 5004
Number of extensions: 23478
Number of successful extensions: 369
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 751153284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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