Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_N08
(1236 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 164 7e-40
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 164 7e-40
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 164 7e-40
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 164 7e-40
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 164 7e-40
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 141 5e-33
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 52 6e-06
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 51 8e-06
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 51 8e-06
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 41 0.008
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 40 0.025
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 40 0.025
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 40 0.025
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 40 0.025
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 40 0.025
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 40 0.025
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 40 0.025
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 164 bits (398), Expect = 7e-40
Identities = 90/250 (36%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Frame = +3
Query: 51 IVXASXRRNAXSHSVLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNR 230
IV + RRN + V+GT LGT K V VTNCF VPH D+V ++ +A ++Y L++
Sbjct: 102 IVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHK 161
Query: 231 SVNSSESIVGWWAPGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPL 410
V+ +E I+GW+A G+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV +
Sbjct: 162 KVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLM 221
Query: 411 GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXXDLAQV-MXXXX 587
GVP G MFTP+ V Y+ E +G+ + KT DL QV
Sbjct: 222 GVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSDLQQVGGASAR 278
Query: 588 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLQLAHSAPDLAKDTFSDAFASSVKDLLMVV 767
L+ L + P + D F S++ DLLMV
Sbjct: 279 IQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVT 338
Query: 768 TLAQLIKXQL 797
LA L + Q+
Sbjct: 339 YLANLTQSQI 348
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 164 bits (398), Expect = 7e-40
Identities = 90/250 (36%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Frame = +3
Query: 51 IVXASXRRNAXSHSVLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNR 230
IV + RRN + V+GT LGT K V VTNCF VPH D+V ++ +A ++Y L++
Sbjct: 102 IVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHK 161
Query: 231 SVNSSESIVGWWAPGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPL 410
V+ +E I+GW+A G+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV +
Sbjct: 162 KVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLM 221
Query: 411 GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXXDLAQV-MXXXX 587
GVP G MFTP+ V Y+ E +G+ + KT DL QV
Sbjct: 222 GVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSDLQQVGGASAR 278
Query: 588 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLQLAHSAPDLAKDTFSDAFASSVKDLLMVV 767
L+ L + P + D F S++ DLLMV
Sbjct: 279 IQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVT 338
Query: 768 TLAQLIKXQL 797
LA L + Q+
Sbjct: 339 YLANLTQSQI 348
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 164 bits (398), Expect = 7e-40
Identities = 90/250 (36%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Frame = +3
Query: 51 IVXASXRRNAXSHSVLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNR 230
IV + RRN + V+GT LGT K V VTNCF VPH D+V ++ +A ++Y L++
Sbjct: 102 IVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHK 161
Query: 231 SVNSSESIVGWWAPGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPL 410
V+ +E I+GW+A G+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV +
Sbjct: 162 KVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLM 221
Query: 411 GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXXDLAQV-MXXXX 587
GVP G MFTP+ V Y+ E +G+ + KT DL QV
Sbjct: 222 GVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSDLQQVGGASAR 278
Query: 588 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLQLAHSAPDLAKDTFSDAFASSVKDLLMVV 767
L+ L + P + D F S++ DLLMV
Sbjct: 279 IQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVT 338
Query: 768 TLAQLIKXQL 797
LA L + Q+
Sbjct: 339 YLANLTQSQI 348
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 164 bits (398), Expect = 7e-40
Identities = 90/250 (36%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Frame = +3
Query: 51 IVXASXRRNAXSHSVLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNR 230
IV + RRN + V+GT LGT K V VTNCF VPH D+V ++ +A ++Y L++
Sbjct: 102 IVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHK 161
Query: 231 SVNSSESIVGWWAPGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPL 410
V+ +E I+GW+A G+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV +
Sbjct: 162 KVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLM 221
Query: 411 GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXXDLAQV-MXXXX 587
GVP G MFTP+ V Y+ E +G+ + KT DL QV
Sbjct: 222 GVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSDLQQVGGASAR 278
Query: 588 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLQLAHSAPDLAKDTFSDAFASSVKDLLMVV 767
L+ L + P + D F S++ DLLMV
Sbjct: 279 IQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVT 338
Query: 768 TLAQLIKXQL 797
LA L + Q+
Sbjct: 339 YLANLTQSQI 348
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 164 bits (398), Expect = 7e-40
Identities = 90/250 (36%), Positives = 127/250 (50%), Gaps = 1/250 (0%)
Frame = +3
Query: 51 IVXASXRRNAXSHSVLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNR 230
IV + RRN + V+GT LGT K V VTNCF VPH D+V ++ +A ++Y L++
Sbjct: 95 IVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHK 154
Query: 231 SVNSSESIVGWWAPGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPL 410
V+ +E I+GW+A G+++T HS +IHEYYSRE P+H+T+DTSL GRM ++AYV +
Sbjct: 155 KVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLM 214
Query: 411 GVPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXXDLAQV-MXXXX 587
GVP G MFTP+ V Y+ E +G+ + KT DL QV
Sbjct: 215 GVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKT---CFSPNRVIGLSSDLQQVGGASAR 271
Query: 588 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLQLAHSAPDLAKDTFSDAFASSVKDLLMVV 767
L+ L + P + D F S++ DLLMV
Sbjct: 272 IQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVT 331
Query: 768 TLAQLIKXQL 797
LA L + Q+
Sbjct: 332 YLANLTQSQI 341
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 141 bits (341), Expect = 5e-33
Identities = 84/252 (33%), Positives = 125/252 (49%), Gaps = 4/252 (1%)
Frame = +3
Query: 54 VXASXRRNAXSHSVLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNRS 233
V + RRN + V+GT LGT K V VTNCF V + +D+V ++ +A ++Y L++
Sbjct: 93 VDSYERRNKGAARVIGTLLGTVNKHSVEVTNCFSVSYN-ESDEVVVDMEFAKNMYELHKK 151
Query: 234 VNSSESIVGWWAPGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPLG 413
V+ +E I+GW+A G+++T HS +IHEYYSRE P+H+T+DTSL G M ++AYV +G
Sbjct: 152 VSPNELILGWYAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHMSIKAYVSTLMG 211
Query: 414 VPNGKQGCMFTPVDVTLTCYEPEIVGLQVCQKTXXXXXXXXXXXXXXXDLAQV----MXX 581
VP G+ +FTP+ V Y+ E + + + KT DL QV
Sbjct: 212 VP-GRTVGVFTPLTVKYAYYDTECIRVDLIMKT---CFSPNRVVGLSSDLQQVGGASAHI 267
Query: 582 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLQLAHSAPDLAKDTFSDAFASSVKDLLM 761
L+ L + P + D F S++ DLLM
Sbjct: 268 QDALSIVLQYAEDILSAKVSADNTIRKVGHFLMSLVNQVPKIVPDDFETMLHSNINDLLM 327
Query: 762 VVTLAQLIKXQL 797
V LA L + Q+
Sbjct: 328 VAYLANLTQSQI 339
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 51.6 bits (118), Expect = 6e-06
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHA--DQVE-AELNYALDVYALNRSVNSSESIVGW 263
V+G LG+ K V+ V+N F VP D V + +Y ++Y + + VN+ E IVGW
Sbjct: 35 VVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGW 94
Query: 264 WAPGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNG-KQGCM 440
+ G ++ + I+E R C V V +D + AY+ V +G
Sbjct: 95 YHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEDQDDGTPTSKT 154
Query: 441 FTPVDVTLTCYEPEIVGLQ 497
F V + E E VG++
Sbjct: 155 FEHVTSEIGAEEAEEVGVE 173
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 51.2 bits (117), Expect = 8e-06
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHA--DQVE-AELNYALDVYALNRSVNSSESIVGW 263
V+G LG+ K V+ V+N F VP D V + +Y ++Y + + VN+ E IVGW
Sbjct: 35 VVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGW 94
Query: 264 WAPGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPL----GVPNGKQ 431
+ G ++ + I+E R C V V +D + AY+ V G P K
Sbjct: 95 YHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSK- 153
Query: 432 GCMFTPVDVTLTCYEPEIVGLQ 497
F V + E E VG++
Sbjct: 154 --TFEHVTSEIGAEEAEEVGVE 173
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 51.2 bits (117), Expect = 8e-06
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHA--DQVE-AELNYALDVYALNRSVNSSESIVGW 263
V+G LG+ K V+ V+N F VP D V + +Y ++Y + + VN+ E IVGW
Sbjct: 35 VVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGW 94
Query: 264 WAPGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPL----GVPNGKQ 431
+ G ++ + I+E R C V V +D + AY+ V G P K
Sbjct: 95 YHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSK- 153
Query: 432 GCMFTPVDVTLTCYEPEIVGLQ 497
F V + E E VG++
Sbjct: 154 --TFEHVTSEIGAEEAEEVGVE 173
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 41.1 bits (92), Expect = 0.008
Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNRSVNSSESIVGWWAP 272
V G LG K + +TNCF P D E+ Y +++ R VN VGW+
Sbjct: 63 VQGVLLGLVVKDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122
Query: 273 ---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLAGGRMGLRAYVCVP 407
G+ VT Y E V + D A G + L+AY P
Sbjct: 123 TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTP 171
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 39.5 bits (88), Expect = 0.025
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNRSVNSSESIVGWWAP 272
V G LG + + +TNCF P D E+ Y +++ R VN VGW+
Sbjct: 63 VQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122
Query: 273 ---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLAGGRMGLRAYVCVP 407
G+ VT Y E V + D A G + L+AY P
Sbjct: 123 TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTP 171
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 39.5 bits (88), Expect = 0.025
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNRSVNSSESIVGWWAP 272
V G LG + + +TNCF P D E+ Y +++ R VN VGW+
Sbjct: 63 VQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122
Query: 273 ---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLAGGRMGLRAYVCVP 407
G+ VT Y E V + D A G + L+AY P
Sbjct: 123 TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTP 171
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 39.5 bits (88), Expect = 0.025
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNRSVNSSESIVGWWAP 272
V G LG + + +TNCF P D E+ Y +++ R VN VGW+
Sbjct: 63 VQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122
Query: 273 ---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLAGGRMGLRAYVCVP 407
G+ VT Y E V + D A G + L+AY P
Sbjct: 123 TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTP 171
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 39.5 bits (88), Expect = 0.025
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNRSVNSSESIVGWWAP 272
V G LG + + +TNCF P D E+ Y +++ R VN VGW+
Sbjct: 60 VQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS 119
Query: 273 ---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLAGGRMGLRAYVCVP 407
G+ VT Y E V + D A G + L+AY P
Sbjct: 120 TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTP 168
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 39.5 bits (88), Expect = 0.025
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNRSVNSSESIVGWWAP 272
V G LG + + +TNCF P D E+ Y +++ R VN VGW+
Sbjct: 63 VQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122
Query: 273 ---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLAGGRMGLRAYVCVP 407
G+ VT Y E V + D A G + L+AY P
Sbjct: 123 TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTP 171
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 39.5 bits (88), Expect = 0.025
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNRSVNSSESIVGWWAP 272
V G LG + + +TNCF P D E+ Y +++ R VN VGW+
Sbjct: 63 VQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122
Query: 273 ---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLAGGRMGLRAYVCVP 407
G+ VT Y E V + D A G + L+AY P
Sbjct: 123 TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTP 171
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 39.5 bits (88), Expect = 0.025
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = +3
Query: 93 VLGTFLGTRAKGVVXVTNCFCVPHKAHADQVEAELNYALDVYALNRSVNSSESIVGWWAP 272
V G LG + + +TNCF P D E+ Y +++ R VN VGW+
Sbjct: 63 VQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS 122
Query: 273 ---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLAGGRMGLRAYVCVP 407
G+ VT Y E V + D A G + L+AY P
Sbjct: 123 TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTP 171
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,703,748
Number of Sequences: 237096
Number of extensions: 2346646
Number of successful extensions: 5035
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5031
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17559747370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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