Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_N07
(1257 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 36 0.016
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.19
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 31 0.25
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 31 0.25
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.33
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 31 0.33
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 30 0.58
SPMIT.02 |||mitochondrial DNA binding endonuclease|Schizosacchar... 29 1.3
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 1.3
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 29 1.3
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 29 1.8
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 1.8
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 29 1.8
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 28 2.4
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 2.4
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 4.1
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 4.1
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 27 4.1
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 27 5.4
SPAC15A10.02 |taf12||transcription factor TFIID complex subunit ... 27 5.4
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 5.4
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 5.4
SPBC409.21 |sec66||ER protein translocation subcomplex subunit S... 26 9.5
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 26 9.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 9.5
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 9.5
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 35.5 bits (78), Expect = 0.016
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Frame = +3
Query: 216 KMXSHEPQXSISXTSRSLKPLQHSANDRENLVGXPTKGLKHQLSQEXPGESVEVKRKNLL 395
K HE R+L +Q S ++ L QE ++ +N L
Sbjct: 289 KSYKHEYANICESLRRALVLIQGSCTEKILRFKEKILDLLEMKQQEENDRISHIEYENDL 348
Query: 396 S-KETQANL-DTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKE 569
+ K+ + + + +++ + + K SEK ++ ++ L+D L E + LR + + +
Sbjct: 349 TVKKLKRRISELEMAVKEYESEKSYSEKEYEEKISSLRIELEDKLAEIDMLRNKLLKEEH 408
Query: 570 ENASLKQMLEEANSFVEIIKEELANDSNN 656
++ S + LEE + +V I+++ N+ N
Sbjct: 409 KHHSTSEKLEELSKYVASIQDKERNNGQN 437
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.9 bits (69), Expect = 0.19
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Frame = +3
Query: 258 SRSLKPLQHSANDRENLVGXPTKGLKHQLSQEXPGESVEVKRKNLLSKE-----TQANL- 419
S LK LQ+S + E L+ + QL E+ + N L KE +Q L
Sbjct: 309 SLRLKELQNSNGELEKLLEAAQSSFEEQLESHKEAEASLKSQINFLEKEVSSLESQLKLA 368
Query: 420 DTKISEDDLTNPKGASE-KYWQILAE-----KRQLALQDALDEN----EKLRKTIEELKE 569
+ ++ D SE KY +L K Q ++ D E +K +T +E++
Sbjct: 369 NERLRHYDEIEISDMSELKYSNLLNNSMKGFKGQSSVSDLYSERLYYKQKYEQTCQEVER 428
Query: 570 ENASLKQMLEEANSFVEIIKEE 635
S ++EEAN ++KE+
Sbjct: 429 LQRSYNHVMEEANLQHPLVKEQ 450
Score = 27.9 bits (59), Expect = 3.1
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Frame = +3
Query: 363 ESVEVKRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEK- 539
++VEV+ ++ + T+ L +++E + +N +KY LA ++ L + + E K
Sbjct: 941 DNVEVEAISIELERTKEKL--RMAELEKSN---IQQKY---LASEKTLEMMNETHEQFKH 992
Query: 540 -LRKTIEELKEENASLKQMLEEANSFVEIIKEELANDS 650
+ I +E+ SL+ L + N VE++KEE + S
Sbjct: 993 LVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSS 1030
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 31.5 bits (68), Expect = 0.25
Identities = 25/111 (22%), Positives = 49/111 (44%)
Frame = +3
Query: 324 KGLKHQLSQEXPGESVEVKRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQ 503
+G + + P VEV + LL + +A+ D S+D + + SE I K +
Sbjct: 85 EGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEV--SIKRRKTE 142
Query: 504 LALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELANDSNN 656
Q+++D + + EE E+ + + + E N E +E++ + N
Sbjct: 143 SNSQESVDSSNS-ESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKN 192
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 31.5 bits (68), Expect = 0.25
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Frame = +3
Query: 324 KGLKHQLSQEXPGESVEVKRKNLLSKETQANLDTKISE---DDLTNPKGASEKYWQILAE 494
K K++ ++ G S + N L ++ ++D+K E D+ + K L
Sbjct: 39 KKRKNRKKKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSDLVR 98
Query: 495 KRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELAN 644
+ Q+ +A + E + K+E+ +K+ LE+++ V +KEE N
Sbjct: 99 RIQIQRDEAEQKAEIYNRDALNTKQEHLDIKKRLEKSDETVCKLKEENEN 148
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 31.1 bits (67), Expect = 0.33
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 384 KNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEEL 563
+++ K + +L SED P G +K + R + Q+ DE EK KT+ +L
Sbjct: 101 ESVAEKPEKEDLAVIESEDKAAKPDGEIKKNVETEVTSRSTSSQEK-DELEKQVKTLHDL 159
Query: 564 KEE-NASLKQMLEEANSFVEIIKEELANDSNND 659
E+ + +K++ E N + AN +++
Sbjct: 160 NEQKDKKIKELKERINDLTYDYETLKANADDSE 192
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 31.1 bits (67), Expect = 0.33
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +3
Query: 399 KETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALD-ENEKLRKTIEELKEEN 575
KE + + KIS L K + K Q A +Q+ D E ++L+ I+ L+EEN
Sbjct: 312 KELTSENELKISR--LQEEKDSLLKKVQEGASLAMQRVQNKHDLEKKRLQSAIQPLQEEN 369
Query: 576 ASLKQMLEE 602
SLKQ +E+
Sbjct: 370 NSLKQQIEQ 378
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 30.3 bits (65), Expect = 0.58
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Frame = +3
Query: 237 QXSISXTSRSLKPLQHSANDRENLVGXPTKGLKHQLSQEXPGESVEVKRKNLLSKETQAN 416
+ S S TS L+ L+ + + ++L + Q+ E V+ LL E +
Sbjct: 641 EDSTSKTSNLLEQLKMTEAEVDSLRKENEEN--KQVIALKESELVKSNDNKLLLNEQIES 698
Query: 417 LDTKISE-----DDLTNPKGASEKYWQILAEKRQLALQDALDE-NEKLRKTIEELKEENA 578
L+ ++S+ + +T K + Y L E+ D LD N+KLR+ E + N+
Sbjct: 699 LNDQLSQLKTEMESVTTSKESLADYLSNLKERHN----DELDSLNKKLRE-FEGILSSNS 753
Query: 579 SLKQMLEEANSFVEIIKEELANDSN 653
SLK +EE N+ ++E + N
Sbjct: 754 SLKSEIEERNNQYVTLRENFDSLQN 778
>SPMIT.02 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 384
Score = 29.1 bits (62), Expect = 1.3
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +3
Query: 465 SEKYWQI-LAEKRQLALQDA-LDENEKLRKTIEELKEENASLKQ 590
++KYW L +K L L+DA L+ EK K +EE++ E SLKQ
Sbjct: 196 TKKYWDYYLFKKAFLILEDANLNSFEKNSK-LEEIRIEKKSLKQ 238
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.1 bits (62), Expect = 1.3
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +3
Query: 372 EVKRKNLLSKETQANLDTKISEDDLTNP--KGASEKYWQILAEKRQ----LALQDALDEN 533
+ K+K ++T A+ + SE D++ P +S K Q KR+ ALQ L+E
Sbjct: 199 QAKKKGSTGEDTLASSEVS-SEVDISTPAENDSSAKGKQAAGSKRKGPNVTALQKMLEEK 257
Query: 534 EKLRKTIEELKEENASLKQMLEEANSFVEIIKEE 635
+ + ++EE A + + + E KEE
Sbjct: 258 RAREEEEQRIREEEARIAEEEKRLAEVEEARKEE 291
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +3
Query: 510 LQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELANDSN 653
+Q + E E RKT++++ E+ S+++ E+ + ++ EEL ++N
Sbjct: 43 IQSQIQEIEAFRKTVDDMYEKQKSIRETYEKDINKLKRELEELGVEAN 90
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -1
Query: 351 LAKVDVSVLSLXYPPNFPYHLLNVVMASVXGLXC 250
L KVD +L L PPN YH L V+ V C
Sbjct: 268 LNKVDRLILELRLPPNDAYHKLRHVIDEVNDNIC 301
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +3
Query: 378 KRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIE 557
K +L + + + K E+DL N + + L E R+L L++ +++KLR +E
Sbjct: 489 KLTSLQEQNNEFDRQLKEQEEDLQNKE-------EELTELRKL-LREQTQDSQKLRLLVE 540
Query: 558 ELKEENASLKQ 590
+L+ E LKQ
Sbjct: 541 QLELERQDLKQ 551
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 28.7 bits (61), Expect = 1.8
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = +3
Query: 372 EVKRKNLLSKETQANLDTKISEDDLTNPKGASE-KYWQILAEKRQLALQDALDENEKLRK 548
E K++ T NL TK S + PK + +I+ E+++ ++ RK
Sbjct: 1202 ESKKRISNGSPTSWNLLTKPSPRSASLPKNSQPLSISEIMTEQKEEI--ESQKRRSSFRK 1259
Query: 549 TIEELKEENASLKQMLEEA---NSFVEIIKEELANDSNNDTG 665
TIEE+++E K EE+ + I+K E +N G
Sbjct: 1260 TIEEIQQEEEFQKWWEEESLRVQKELGILKTERDTSTNRKQG 1301
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 501 QLALQDALDENEKLRKTIEELKEENASLKQMLEE 602
QL LQ E EKL +++LK +NA+ ++ +E
Sbjct: 686 QLKLQVVTSEYEKLETQLKDLKTQNANFHRLEQE 719
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 2.4
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 363 ESVEVKRKNLLSKETQANLDTKISEDDLTN-PKGASEKYWQILA-EKRQLALQDALDENE 536
+++ K K L D + S L+N K +EK I ++ + L D L +
Sbjct: 961 QTISSKYKELEKDYLNIMADYQHSSQHLSNLEKAINEKNLNIRELNEKLMRLDDELLLKQ 1020
Query: 537 KLRKT-IEELKEENASLK 587
+ T ++EL+EENASLK
Sbjct: 1021 RSYDTKVQELREENASLK 1038
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 534 EKLRKTIEELKEENASLKQ---MLEEANSFVEIIKEELANDSNNDTGID 671
E++ + +L+EE A + ++E ANS VE++ E L++ N T D
Sbjct: 867 ERVLQLTNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQVTIAD 915
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 27.5 bits (58), Expect = 4.1
Identities = 21/89 (23%), Positives = 43/89 (48%)
Frame = +3
Query: 417 LDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQML 596
L+T++S + L+ + + +L + D LD + K+R + +L + S++ M+
Sbjct: 1020 LETQMSAEQLSYARIIQQSAKSLLT-----VINDILDLS-KVRAGMMKLTSQRFSVRAMM 1073
Query: 597 EEANSFVEIIKEELANDSNNDTGIDVNDV 683
E+AN + + + N IDV D+
Sbjct: 1074 EDANETLGTLAFSKGIELNYTVDIDVPDI 1102
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 4.1
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +3
Query: 426 KISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEA 605
K+ DL N K +I++ +RQL EN+KL++T+E A L++ + E
Sbjct: 1158 KLGLSDLQNHVKRISKEMEIISCQRQLLFL----ENKKLKRTVESSNRVIADLQRGITEK 1213
Query: 606 NSFVEIIKEELANDSN 653
+ V E + SN
Sbjct: 1214 D--VSSTSESVGERSN 1227
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 27.5 bits (58), Expect = 4.1
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +3
Query: 372 EVKRKNLLSKETQ---ANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKL 542
+V++ LS E + L+ + +D T P + EK AEK L + +L
Sbjct: 339 KVEKLQALSDEKDFYISKLEKSLDRND-TTPVPSDEKLSNYAAEKENL-----VSRISEL 392
Query: 543 RKTIEELKEENASLKQMLEEANSFVEIIKEELANDSNN 656
TIE+L N + + A +E +E NDS++
Sbjct: 393 EHTIEQLTINNERDNERMSPAEFELETTQEVEENDSDS 430
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 486 LAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEE--ANSFVEIIKEELANDSNND 659
L ++RQ ++ E + R + + +E+N S K EE + S+ E E+++ D+ +
Sbjct: 156 LKKRRQERSARSVSERTRKRSPVSDYEEQNESEKSEEEEGYSPSYAEEKVEQVSKDNASA 215
Query: 660 TGIDVNDV 683
D+N +
Sbjct: 216 NLYDLNAI 223
>SPAC15A10.02 |taf12||transcription factor TFIID complex subunit A
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 27.1 bits (57), Expect = 5.4
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 480 QILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKE---ELANDS 650
++L++++ L +D EK+ +EEL +LE A+ FVE + LA
Sbjct: 341 RLLSKRKLHDLLQQIDSEEKIEPEVEEL---------LLEIADEFVESVTNFACRLAKHR 391
Query: 651 NNDTGIDVNDV 683
+DT +DV DV
Sbjct: 392 KSDT-LDVRDV 401
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 507 ALQDALDENEKLRKTIEELKEENASLKQMLEE 602
+L+ ENE+LR+ ++ EEN S+++ L E
Sbjct: 651 SLESLKRENEELREQLKVEHEENISMQKQLSE 682
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 519 ALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKE 632
+++ EKL + +LKEE L EE ++ IK+
Sbjct: 370 SVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKK 407
>SPBC409.21 |sec66||ER protein translocation subcomplex subunit
Sec66 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 192
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 528 ENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELANDSNNDTGI 668
ENEK+ I+ + ++ S+ Q + E EEL + + G+
Sbjct: 145 ENEKIHSIIDNIPKDIDSISQRWQTEKILYEAADEELRIQAQKELGV 191
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 441 DLTNPKGASEKYWQILAEKRQLALQDALDENEKL 542
DL N S W + QL L +DENE++
Sbjct: 194 DLCNHSSKSNAKWSFSEDAMQLYLDKDIDENEEV 227
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.2 bits (55), Expect = 9.5
Identities = 19/92 (20%), Positives = 43/92 (46%)
Frame = +3
Query: 399 KETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENA 578
K + + +T++ D T S+K AEK +L + ++L +R +EEL +E
Sbjct: 191 KGLKRDQETQVKVDQATLTHYRSDKE---RAEKIELRVHESLKRISCIRSKVEELDQEIT 247
Query: 579 SLKQMLEEANSFVEIIKEELANDSNNDTGIDV 674
++ +E E ++++ + ++ D+
Sbjct: 248 ETARLQDELFKSTEEYEQQMITIRHLESQSDI 279
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 9.5
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = +3
Query: 366 SVEVKRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEK--RQLALQDALDENEK 539
S++ + NL SK+ + E+ ++ A+ K +I +E+ + ++D +
Sbjct: 407 SIDEYQNNLSSKDKMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQD 466
Query: 540 LRKTIE----ELKEENASLKQMLEEANSFVEIIKEE 635
LR + ELKE++A + + +E N+ E IKE+
Sbjct: 467 LRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQ 502
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,576,336
Number of Sequences: 5004
Number of extensions: 59810
Number of successful extensions: 230
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 681602054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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