Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N07
         (1257 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    32   0.040
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.22 
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          27   1.1  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       27   1.5  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    26   2.7  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 31.9 bits (69), Expect = 0.040
 Identities = 19/80 (23%), Positives = 44/80 (55%)
 Frame = +3

Query: 399 KETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENA 578
           +E Q+NL++     +L +   A   +  ++ ++ QLA  D  DE +KLR +IEE +    
Sbjct: 293 EEKQSNLESAGRMGELLSELQAKLAWRNVIDQEEQLAAVD--DELKKLRTSIEEQEHRIR 350

Query: 579 SLKQMLEEANSFVEIIKEEL 638
           + + ++ + +S ++  + ++
Sbjct: 351 NREALVAKTDSTIDTYRADI 370


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 29.5 bits (63), Expect = 0.22
 Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
 Frame = +3

Query: 276  LQHSANDRENLVGXPTKGLKHQLSQEXPGESVEVKRKNLLSKETQANLDTKISEDDLTNP 455
            L+ + N  ENL+       K +L Q     SVE +++ L +   +     K  +  LT+ 
Sbjct: 821  LEVTKNKLENLLTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVVATEKRIKKVLTDT 880

Query: 456  KGASEKYWQILAEKRQLALQDALDE-NEKLRKTIEELKEENASLKQMLEEANSFVEIIKE 632
            +    K  + L  K+Q  LQ  L+   +K ++  E+L+E+   +++   + N   + I E
Sbjct: 881  EEVDRKLSEAL--KQQKTLQKELESWIQKEKEAQEKLEEDGKRMEKWATKENMLRQKIDE 938



 Score = 28.3 bits (60), Expect = 0.50
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
 Frame = +3

Query: 339 QLSQEXPGESVEVKRKNLLSKETQANLDTKISEDDLTNPKGASEK--YWQILAEKRQLAL 512
           QL QE   E  + + +    K+T+AN+++ +SE   T  K    K  + +I A+ R   +
Sbjct: 688 QLIQEHEKELADFRAE---LKQTEANINSIVSEMQKTETKQGKSKDAFEKIQADIR--LM 742

Query: 513 QDALDENEKLRKTIE-ELKEENASLKQMLEEANSFVEIIKEEL 638
           +D L   E+ R   E  L +  A+L+ M          + +EL
Sbjct: 743 KDELSRIERFRSPKERSLAQCKANLEAMTSTKEGLENELHQEL 785


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +3

Query: 456 KGASEKYWQILAEKRQLALQDALDEN--EKLRKTIEELKEENASL 584
           KG  EK  + L EKR+  L ++LD+N  +K+ +  E+LK  N  L
Sbjct: 37  KGEVEKQSKKL-EKRKETLGESLDKNHKKKIERDEEKLKNNNRDL 80


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 429 ISEDDLTNPKGASEKYWQILAEKRQLALQDALDE 530
           +SE D +NP+ ASE       EK +  +Q+ +DE
Sbjct: 237 LSEMDFSNPRLASETINNWAREKTRQRIQEVVDE 270


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 528 ENEKLRKTIEELKEENASLKQMLEEANSFV 617
           E EKLR+T+E+  + +A L ++ +    FV
Sbjct: 337 ETEKLRRTVEQTGKSSAELVRLKKLEEKFV 366


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 903,215
Number of Sequences: 2352
Number of extensions: 14477
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 143878944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)