Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N04
         (1228 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   2.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   6.0  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   6.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   7.9  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   7.9  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = +3

Query: 177 VNIRTSIDKQKYLFAIPPKEMTDGVQILRRNRPGTKAKDFCRWPDEPFEEMDSTLAVQQF 356
           V+ R+S+     LFA  P+     V +   N+P    K     P+   E + +T  +QQ 
Sbjct: 48  VDCRSSLASGSKLFAPEPRVALPRVSVTGINKPTVATKAASTTPE--LELLKAT--IQQL 103

Query: 357 IQQTIRRDPSNL---EAILKMPEVLDE 428
            +Q +     N    E I +M ++L E
Sbjct: 104 EEQNLEMKEQNFRLAEQITRMCQLLQE 130


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 188 NQYRQTKVSFRHSTKRNDRRSSNTPTQSTRHQS 286
           + YR+T+  +R + K +   SS     S+RH+S
Sbjct: 610 DDYRRTEKDYRGNGKHDKYGSSRHSDSSSRHRS 642


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +3

Query: 123 VVEVKHNSNKCRRNYQRLVNIRTSIDKQKYLFA 221
           +VE+  N+N   +N+  L  ++  ++K +  F+
Sbjct: 109 IVELSENNNALLQNFMELTELKHVLEKTQVFFS 141


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -3

Query: 233  FWWNGEKILLFVYTGS--NVNKP 171
            F WNG++  LF  TGS  + N+P
Sbjct: 1615 FSWNGQEFNLFCSTGSSNSCNRP 1637


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 688 LPSWDLFVEGFTGSSHMHTFIIVQFMMHL 774
           LPS+ + V  F  + H +  I+VQ+  +L
Sbjct: 336 LPSYVMRVRAFVETGHSYLTILVQYYCYL 364


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,134,739
Number of Sequences: 2352
Number of extensions: 25983
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 139791474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)