Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_N04
(1228 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10990-8|AAB59173.2| 223|Caenorhabditis elegans Hypothetical pr... 319 2e-87
AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical ... 59 7e-09
Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 33 0.41
Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical pr... 31 1.7
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 30 2.9
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 30 2.9
Z71264-4|CAA95831.1| 348|Caenorhabditis elegans Hypothetical pr... 29 5.1
S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein. 29 5.1
M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protei... 29 5.1
AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer :... 29 5.1
>L10990-8|AAB59173.2| 223|Caenorhabditis elegans Hypothetical
protein C30A5.3 protein.
Length = 223
Score = 319 bits (784), Expect = 2e-87
Identities = 145/205 (70%), Positives = 168/205 (81%)
Frame = +3
Query: 258 LRRNRPGTKAKDFCRWPDEPFEEMDSTLAVQQFIQQTIRRDPSNLEAILKMPEVLDEGVW 437
+RRN PGTK D+ W FEEMDS L +QQ+IQQTI+ +P+++ IL P DEGVW
Sbjct: 10 VRRNGPGTKRADWNNWSPLAFEEMDSALNIQQYIQQTIKANPADVATILTPPLDQDEGVW 69
Query: 438 KYEHLRQFCMELNGLAVRLQNECKPETCTQMTATEQWIFLCAAHKTPKECPAIDYTRHTL 617
KYEHLRQFC+ELNGLA+ LQ EC PETC QMTATEQWIFLCAAHK P ECPAIDYTRHTL
Sbjct: 70 KYEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCAAHKNPNECPAIDYTRHTL 129
Query: 618 DGAACLLNSNKYFPSRVNIKDSSIAKLGSVCRRVYRIFSHAYFHHRSIYDAFERETHLCK 797
DGAA LLNSNKYFPSRVNIK+ SI+KLGSV RRVYRIFSHA+FHHR ++D FE ETHLCK
Sbjct: 130 DGAATLLNSNKYFPSRVNIKEISISKLGSVARRVYRIFSHAFFHHRKLFDEFENETHLCK 189
Query: 798 RFTYFVTKYPIIPQEILILPKLDDE 872
RFT +V+KY ++ QE LI+P L ++
Sbjct: 190 RFTTYVSKYNLMQQEHLIVPILPNQ 214
>AF125960-4|AAD14738.1| 292|Caenorhabditis elegans Hypothetical
protein T12B3.4 protein.
Length = 292
Score = 58.8 bits (136), Expect = 7e-09
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 10/159 (6%)
Frame = +3
Query: 387 NLEAILKMPEVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMTATEQWIFLCA- 563
+L +K+P + W H F +N + + + C E+C M ++ +L
Sbjct: 103 DLRHAVKLPPSENFDDWLAVHTVDFFNRINLMYGTISDVCTRESCPTMCGGSRYEYLWQD 162
Query: 564 --AHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVNI---KD-SSIAKLGSVCRRVYR 725
+K P PA Y + +D +N FPS N+ KD I K + R++R
Sbjct: 163 GIEYKKPTRLPAPQYMQLLMDWIEVRINDEHIFPSSTNVSFPKDFRQICK--KILTRLFR 220
Query: 726 IFSHAYFHHRSIYDAFERETH---LCKRFTYFVTKYPII 833
+F H Y HH E H L K F +FVT+Y ++
Sbjct: 221 VFVHVYIHHFDRIRELGAEPHANTLYKHFYFFVTEYGMV 259
>Z77660-8|CAB01178.2| 193|Caenorhabditis elegans Hypothetical
protein F38H4.10 protein.
Length = 193
Score = 48.0 bits (109), Expect = 1e-05
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Frame = +3
Query: 387 NLEAILKMPEVLDEGVWKYEHLRQFCMELNGL-AVRLQNECKPETCTQMTATEQWIFLCA 563
NL LK+P D+ W ++ ++ + V ++EC C MTA + +
Sbjct: 21 NLRDALKLPPGEDKNEWLAVNIIDLVNQVRMVFGVLCESECTDSKCPSMTAHGRQ-YTWT 79
Query: 564 AHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVN--IKDSSIAKLGSVCRRVYRIFSH 737
+ T A Y +L ++ FPS + + ++ RR++RI++H
Sbjct: 80 SEGTLLNTSAPQYIDLSLTACQNNVDDENVFPSEIGKQFPTDFEERCQAIMRRLFRIYAH 139
Query: 738 AYFHHRSIYDAFERETHL---CKRFTYFVTKYPIIPQE 842
YF H + + A + HL K+F F ++ ++ +E
Sbjct: 140 VYFAHVNHFKAIKALAHLNTSFKQFVLFANQFQLLNKE 177
>Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.41
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Frame = +3
Query: 438 KYEHLRQFCMELNGLAVRLQNECKPETCTQMT-ATEQWIFLCAAHKTPKECPAIDYTRHT 614
+YE + E + L ++ + KP +Q T + W F+ A K P CP++
Sbjct: 360 EYEVPEERSAESSDLKIKKNKDGKPRKRSQHTKGNKLWEFIRDALKDPSTCPSVVRWEDP 419
Query: 615 LDGAACLLNSNK---YFPSRVNIKDSSIAKLGSVCRRVY 722
++G ++ S K + +R N + + KL R Y
Sbjct: 420 IEGVFRIVESEKLARLWGARKNNEKMTYEKLSRAMRTYY 458
>Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.41
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Frame = +3
Query: 438 KYEHLRQFCMELNGLAVRLQNECKPETCTQMT-ATEQWIFLCAAHKTPKECPAIDYTRHT 614
+YE + E + L ++ + KP +Q T + W F+ A K P CP++
Sbjct: 360 EYEVPEERSAESSDLKIKKNKDGKPRKRSQHTKGNKLWEFIRDALKDPSTCPSVVRWEDP 419
Query: 615 LDGAACLLNSNK---YFPSRVNIKDSSIAKLGSVCRRVY 722
++G ++ S K + +R N + + KL R Y
Sbjct: 420 IEGVFRIVESEKLARLWGARKNNEKMTYEKLSRAMRTYY 458
>Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/137 (17%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Frame = +3
Query: 378 DPSNLEAILKMPEVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMT--ATEQWI 551
D + + I +PE +++ W ++ +N L L C ++C M+ T + I
Sbjct: 124 DGNTVAKITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAI 183
Query: 552 FLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVNIKDSSIAK--LGSVCRRVYR 725
+ K + PA+ Y + + + FP++ K + + + + ++
Sbjct: 184 YTDERGKR-QVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFH 242
Query: 726 IFSHAYFHHRSIYDAFE 776
H Y H + A +
Sbjct: 243 CMGHMYLKHWDVLGALQ 259
>Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/137 (17%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Frame = +3
Query: 378 DPSNLEAILKMPEVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMT--ATEQWI 551
D + + I +PE +++ W ++ +N L L C ++C M+ T + I
Sbjct: 124 DGNTVAKITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAI 183
Query: 552 FLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVNIKDSSIAK--LGSVCRRVYR 725
+ K + PA+ Y + + + FP++ K + + + + ++
Sbjct: 184 YTDERGKR-QVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFH 242
Query: 726 IFSHAYFHHRSIYDAFE 776
H Y H + A +
Sbjct: 243 CMGHMYLKHWDVLGALQ 259
>Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical
protein F09A5.4e protein.
Length = 324
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/137 (17%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Frame = +3
Query: 378 DPSNLEAILKMPEVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMT--ATEQWI 551
D + + I +PE +++ W ++ +N L L C ++C M+ T + I
Sbjct: 98 DGNTVAKITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAI 157
Query: 552 FLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVNIKDSSIAK--LGSVCRRVYR 725
+ K + PA+ Y + + + FP++ K + + + + ++
Sbjct: 158 YTDERGKR-QVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFH 216
Query: 726 IFSHAYFHHRSIYDAFE 776
H Y H + A +
Sbjct: 217 CMGHMYLKHWDVLGALQ 233
>Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical
protein F09A5.4d protein.
Length = 314
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/137 (17%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Frame = +3
Query: 378 DPSNLEAILKMPEVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMT--ATEQWI 551
D + + I +PE +++ W ++ +N L L C ++C M+ T + I
Sbjct: 88 DGNTVAKITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAI 147
Query: 552 FLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVNIKDSSIAK--LGSVCRRVYR 725
+ K + PA+ Y + + + FP++ K + + + + ++
Sbjct: 148 YTDERGKR-QVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFH 206
Query: 726 IFSHAYFHHRSIYDAFE 776
H Y H + A +
Sbjct: 207 CMGHMYLKHWDVLGALQ 223
>Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical
protein F09A5.4b protein.
Length = 341
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/137 (17%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Frame = +3
Query: 378 DPSNLEAILKMPEVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMT--ATEQWI 551
D + + I +PE +++ W ++ +N L L C ++C M+ T + I
Sbjct: 115 DGNTVAKITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAI 174
Query: 552 FLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVNIKDSSIAK--LGSVCRRVYR 725
+ K + PA+ Y + + + FP++ K + + + + ++
Sbjct: 175 YTDERGKR-QVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFH 233
Query: 726 IFSHAYFHHRSIYDAFE 776
H Y H + A +
Sbjct: 234 CMGHMYLKHWDVLGALQ 250
>Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical
protein F09A5.4a protein.
Length = 300
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/137 (17%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Frame = +3
Query: 378 DPSNLEAILKMPEVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMT--ATEQWI 551
D + + I +PE +++ W ++ +N L L C ++C M+ T + I
Sbjct: 74 DGNTVAKITSLPEGIEKREWIAHNVLGLFEHVNALCGTLSEVCTQQSCPHMSFPGTSKAI 133
Query: 552 FLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVNIKDSSIAK--LGSVCRRVYR 725
+ K + PA+ Y + + + FP++ K + + + + ++
Sbjct: 134 YTDERGKR-QVYPAVQYIDCVITQCESMSRQEEIFPTKYGNKFNGNFEPAVKKMLSHLFH 192
Query: 726 IFSHAYFHHRSIYDAFE 776
H Y H + A +
Sbjct: 193 CMGHMYLKHWDVLGALQ 209
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-related
protein LIN-59 protein.
Length = 1312
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 190 PV*TNKSIFSPF-HQKK*PTEFKYSDAIDPAPKP 288
P+ TN +F+ F H KK +F+ D +P+PKP
Sbjct: 1229 PINTNSYVFTEFTHPKKVVRDFRPYDPSNPSPKP 1262
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 190 PV*TNKSIFSPF-HQKK*PTEFKYSDAIDPAPKP 288
P+ TN +F+ F H KK +F+ D +P+PKP
Sbjct: 1229 PINTNSYVFTEFTHPKKVVRDFRPYDPSNPSPKP 1262
>Z71264-4|CAA95831.1| 348|Caenorhabditis elegans Hypothetical
protein K07G5.5 protein.
Length = 348
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 430 VFGSMNI*DNFVWSSMDWLCVYKMNANLKHVHK 528
+ GS++I FV SSMD C + MN L ++K
Sbjct: 92 ISGSLSIMSTFVDSSMDIACSFVMNICLSEINK 124
>S42187-1|AAB22845.1| 1475|Caenorhabditis elegans pTra2A protein.
Length = 1475
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +3
Query: 159 RNYQRLVNIRTSIDKQKYLFAIPPKEMTDGVQILRRNRPGTKAKDFCRWPDEPFEEMDST 338
RN +++ + ++DK+K I + I N PGT A DEP +
Sbjct: 1281 RNIEKMKKSQENLDKEKSEEKISESKKNQDDSIESPNLPGTPAN---LPVDEPLPPVGRL 1337
Query: 339 LAVQQFIQQTIRRDP 383
V+ + + RRDP
Sbjct: 1338 YIVEHVLPEEYRRDP 1352
>M91371-1|AAA28150.1| 1475|Caenorhabditis elegans membrane protein
protein.
Length = 1475
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +3
Query: 159 RNYQRLVNIRTSIDKQKYLFAIPPKEMTDGVQILRRNRPGTKAKDFCRWPDEPFEEMDST 338
RN +++ + ++DK+K I + I N PGT A DEP +
Sbjct: 1281 RNIEKMKKSQENLDKEKSEEKISESKKNQDDSIESPNLPGTPAN---LPVDEPLPPVGRL 1337
Query: 339 LAVQQFIQQTIRRDP 383
V+ + + RRDP
Sbjct: 1338 YIVEHVLPEEYRRDP 1352
>AC006608-1|AAF39755.1| 1475|Caenorhabditis elegans Transformer : xx
animals transformedinto males protein 2, isoform a
protein.
Length = 1475
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +3
Query: 159 RNYQRLVNIRTSIDKQKYLFAIPPKEMTDGVQILRRNRPGTKAKDFCRWPDEPFEEMDST 338
RN +++ + ++DK+K I + I N PGT A DEP +
Sbjct: 1281 RNIEKMKKSQENLDKEKSEEKISESKKNQDDSIESPNLPGTPAN---LPVDEPLPPVGRL 1337
Query: 339 LAVQQFIQQTIRRDP 383
V+ + + RRDP
Sbjct: 1338 YIVEHVLPEEYRRDP 1352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,579,844
Number of Sequences: 27780
Number of extensions: 546953
Number of successful extensions: 1349
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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