Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N03
         (1261 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    31   0.071
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    28   0.66 
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     27   1.5  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   3.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   4.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   6.1  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 31.1 bits (67), Expect = 0.071
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = -2

Query: 243  SGMEVYKITCLLXPWYDKLKTSESRDFITTINRLRFGHNTAPSHLARLGIVSNSQCIHCQ 64
            +G   Y +   +  W D+ K  +   F+T +     GH    S+L R    S+S+C  C+
Sbjct: 920  NGRWTYLLIPDVGAWLDR-KHGDVDYFVTQVLS---GHGCFRSYLHRFNRASSSRCPACK 975

Query: 63   AEEGTIHHI 37
             E+ T+ H+
Sbjct: 976  DEDETVDHV 984


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 27.9 bits (59), Expect = 0.66
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2

Query: 135 GHNTAPSHLARLGIVSNSQCIHCQAEEGTIHH 40
           GH    SHL R+G V +  C  C  E  T  H
Sbjct: 900 GHGFFRSHLHRMGYVPSPVCPACGDENQTAEH 931


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 452 NVNIAFMWVPSHRGITGNEKADKAAREAINSIDVT 348
           N+N A+ + P  R     E  D  A EA+   + T
Sbjct: 234 NLNTAYGFAPGSRAFLAQEVIDMGAHEAVRKFEYT 268


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 435 KCYIYILMMIFIQKLFYNIQDVISFIIYRYI 527
           K YI+ L MIF+  L +++    + +IYR +
Sbjct: 259 KVYIHWLYMIFVYFLPFSLISFFNLMIYRQV 289


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 4.7
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -2

Query: 153  INRLRFGHNTAPSHLARLGIVSNSQCIHCQAEEGTIHH 40
            ++++  GH      L R+G   +  CI C     T  H
Sbjct: 940  LSQVLSGHGFFRDDLCRMGFTPSPDCIRCTGVPETAEH 977


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 131 WPNLNLFIVVMKSRLSLVFNLSY 199
           WP LNL I +M   +  + NL++
Sbjct: 913 WPTLNLLISIMGRTMGALGNLTF 935


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,126,806
Number of Sequences: 2352
Number of extensions: 21721
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 144287691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)