Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_N01
         (1237 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   134   1e-33
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   134   1e-33
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   114   1e-27
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   6.2  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   6.2  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  134 bits (325), Expect = 1e-33
 Identities = 62/81 (76%), Positives = 73/81 (90%)
 Frame = +3

Query: 666 INEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGE 845
           INEPTAAA+AYGLDK  + ERNVLIFDLGGGTFDVS+LTI+EG +FEVK+TAGDTHLGGE
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGE 59

Query: 846 DFDNRLVNHLAEEFKRKYKKD 908
           DFDNRLV +  ++FK+K+K D
Sbjct: 60  DFDNRLVEYCTQDFKKKHKAD 80


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  134 bits (325), Expect = 1e-33
 Identities = 62/81 (76%), Positives = 73/81 (90%)
 Frame = +3

Query: 666 INEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGE 845
           INEPTAAA+AYGLDK  + ERNVLIFDLGGGTFDVS+LTI+EG +FEVK+TAGDTHLGGE
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGE 59

Query: 846 DFDNRLVNHLAEEFKRKYKKD 908
           DFDNRLV +  ++FK+K+K D
Sbjct: 60  DFDNRLVEYCTQDFKKKHKAD 80


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  114 bits (274), Expect = 1e-27
 Identities = 53/81 (65%), Positives = 69/81 (85%)
 Frame = +3

Query: 666 INEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGE 845
           INEPTAAA+AYGLDK    E+N+L++DLGGGTFDVSILTID G +FEV +T+GDTHLGGE
Sbjct: 1   INEPTAAAIAYGLDKK-GAEQNILVYDLGGGTFDVSILTIDNG-VFEVVATSGDTHLGGE 58

Query: 846 DFDNRLVNHLAEEFKRKYKKD 908
           DFD +++++  +  K+K+KKD
Sbjct: 59  DFDQKVMDYFIKMVKQKHKKD 79


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 57  TKQTKRLQCXLKTSFSTSYLLF 122
           TKQ  ++   +++ F T+YL+F
Sbjct: 484 TKQQSKIHLIVRSVFVTTYLMF 505


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -3

Query: 593 CRNCDYRIPHCTS-QIGFRRLLH 528
           CR+C Y   +C S +I  RR  H
Sbjct: 289 CRDCSYATKYCHSLKIHLRRYGH 311


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -3

Query: 593 CRNCDYRIPHCTS-QIGFRRLLH 528
           CR+C Y   +C S +I  RR  H
Sbjct: 47  CRDCSYATKYCHSLKIHLRRYGH 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,089
Number of Sequences: 336
Number of extensions: 4496
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36171872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)