Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M20
         (1294 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   2.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 633 QKRXXPRGXXXGPPPPXXRXKNPPQ 707
           Q R        GPPPP  R + PPQ
Sbjct: 906 QHRGPGAAAATGPPPPTHRLEQPPQ 930


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = +2

Query: 446 GGGXGXXXWXPXPXPPXXXXGPXXPQGGXGFXPXXG 553
           GGG G     P P  P    GP  P+G  GF    G
Sbjct: 404 GGGEGRPG-APGPKGPRGYEGPQGPKGMDGFDGEKG 438


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 14/46 (30%), Positives = 14/46 (30%)
 Frame = -3

Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPP 444
           P   GPP SP        P G         G GG  P      P P
Sbjct: 588 PPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYP 633



 Score = 24.2 bits (50), Expect = 8.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +3

Query: 906 GGXXNPPXXPPPGAXXGKKPXXXXP 980
           GG   PP  PPPG      P    P
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLP 549


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.309    0.148    0.496 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,864
Number of Sequences: 2352
Number of extensions: 7420
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 148783908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)