Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_M20
(1294 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.007
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.007
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.007
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 38 0.015
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 37 0.036
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 33 0.44
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.44
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.44
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 33 0.44
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 33 0.44
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 33 0.58
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 33 0.58
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 33 0.58
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.77
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 32 0.77
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 32 0.77
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 32 0.77
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 32 1.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 31 1.8
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 2.3
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 2.3
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 2.3
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 2.3
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 2.3
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 31 2.3
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 30 3.1
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 4.1
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 30 4.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 4.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 4.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 4.1
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.4
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 29 7.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 7.2
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 7.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 7.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 7.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 7.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 7.2
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 29 7.2
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 7.2
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 7.2
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 7.2
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 9.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 9.5
Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical pr... 29 9.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 9.5
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 9.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/69 (36%), Positives = 26/69 (37%)
Frame = -3
Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPP 402
P GPP P P+ G P GG P P PPP G G PP PP
Sbjct: 737 PITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPP---PPPPPGGFKG--GPPPPPP 789
Query: 401 PGXXXPXXP 375
PG P P
Sbjct: 790 PGMFAPMAP 798
Score = 37.5 bits (83), Expect = 0.020
Identities = 24/79 (30%), Positives = 26/79 (32%)
Frame = -3
Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPP 402
P GPP P P+ G P GG P P PPP PP PP
Sbjct: 721 PITGGPPPPPPPGGLP--PITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 401 PGXXXPXXPXXXXXXFFSP 345
PG P F+P
Sbjct: 777 PGGFKGGPPPPPPPGMFAP 795
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 509 APXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPPPGXXXP 384
AP GG P PPP G G PP PPP P
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 897 PQXGGXXNPPXXPPPGAXXGKKPXXXXP 980
P GG PP PPPG G P P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 946 APGGGXXGGXXXPPXWGXXPPPPLXXPXXAXXXXPP 839
AP G PP G PPPP P PP
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPP 730
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXGGXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXXPG 655
P P P GP P G P GG GG GG P PG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--------ISGGPPPPPPPPG 766
Query: 656 XSXRXPPP 679
PPP
Sbjct: 767 GCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/69 (36%), Positives = 26/69 (37%)
Frame = -3
Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPP 402
P GPP P P+ G P GG P P PPP G G PP PP
Sbjct: 737 PITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPP---PPPPPGGFKG--GPPPPPP 789
Query: 401 PGXXXPXXP 375
PG P P
Sbjct: 790 PGMFAPMAP 798
Score = 37.5 bits (83), Expect = 0.020
Identities = 24/79 (30%), Positives = 26/79 (32%)
Frame = -3
Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPP 402
P GPP P P+ G P GG P P PPP PP PP
Sbjct: 721 PITGGPPPPPPPGGLP--PITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 401 PGXXXPXXPXXXXXXFFSP 345
PG P F+P
Sbjct: 777 PGGFKGGPPPPPPPGMFAP 795
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 509 APXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPPPGXXXP 384
AP GG P PPP G G PP PPP P
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 897 PQXGGXXNPPXXPPPGAXXGKKPXXXXP 980
P GG PP PPPG G P P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 946 APGGGXXGGXXXPPXWGXXPPPPLXXPXXAXXXXPP 839
AP G PP G PPPP P PP
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPP 730
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXGGXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXXPG 655
P P P GP P G P GG GG GG P PG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--------ISGGPPPPPPPPG 766
Query: 656 XSXRXPPP 679
PPP
Sbjct: 767 GCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.007
Identities = 25/69 (36%), Positives = 26/69 (37%)
Frame = -3
Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPP 402
P GPP P P+ G P GG P P PPP G G PP PP
Sbjct: 320 PITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPP---PPPPPGGFKG--GPPPPPP 372
Query: 401 PGXXXPXXP 375
PG P P
Sbjct: 373 PGMFAPMAP 381
Score = 37.5 bits (83), Expect = 0.020
Identities = 24/79 (30%), Positives = 26/79 (32%)
Frame = -3
Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPP 402
P GPP P P+ G P GG P P PPP PP PP
Sbjct: 304 PITGGPPPPPPPGGLP--PITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 401 PGXXXPXXPXXXXXXFFSP 345
PG P F+P
Sbjct: 360 PGGFKGGPPPPPPPGMFAP 378
Score = 34.3 bits (75), Expect = 0.19
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 509 APXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPPPGXXXP 384
AP GG P PPP G G PP PPP P
Sbjct: 278 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP 319
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 897 PQXGGXXNPPXXPPPGAXXGKKPXXXXP 980
P GG PP PPPG G P P
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 946 APGGGXXGGXXXPPXWGXXPPPPLXXPXXAXXXXPP 839
AP G PP G PPPP P PP
Sbjct: 278 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPP 313
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXGGXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXXPG 655
P P P GP P G P GG GG GG P PG
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP--------ISGGPPPPPPPPG 349
Query: 656 XSXRXPPP 679
PPP
Sbjct: 350 GCPPPPPP 357
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 37.9 bits (84), Expect = 0.015
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +3
Query: 402 GXXGGXXXXXXXXXGGGXGXFXXGXPPPXPPKXXRGXGPPKGGXGXXXXXGGXXGTXXXG 581
G GG GGG G PPP PP G G GG G GG G G
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
Score = 32.7 bits (71), Expect = 0.58
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +3
Query: 399 GGXXGGXXXXXXXXXGGGXGXFXXGXPPPXPPKXXRGXGPPKGGXGXXXXXGGXXGTXXX 578
GG GG GGG G PPP PP G G GG G GG G
Sbjct: 30 GGCGGGCGGGGGCGGGGGCGGGCA--PPPPPPACGGGCG--GGGGGCGGGGGGCGGGGGC 85
Query: 579 G 581
G
Sbjct: 86 G 86
Score = 32.3 bits (70), Expect = 0.77
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 399 GGXXGGXXXXXXXXXG-GGXGXFXXGXPPPXPPKXXRGXGPPKGGXGXXXXXGGXXGTXX 575
GG GG G GG G G PP PP G G GG G GG G
Sbjct: 83 GGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPAC-GGGCGGGGGGCGGGCGGGGGGGC 141
Query: 576 XG 581
G
Sbjct: 142 GG 143
Score = 29.9 bits (64), Expect = 4.1
Identities = 28/102 (27%), Positives = 28/102 (27%)
Frame = +1
Query: 385 GXXXPGGGXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXKXGXXG 564
G GGG GG GGG P PPPP G G G G
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGG 83
Query: 565 GPKXWGKXXXKXXNXXGPXGRKXKKGPXPGXXXKXPPPXXXG 690
G G G G G G PPP G
Sbjct: 84 GCGGGGGGCGGGGGGCGGGG-----GCGGGCAPPPPPPACGG 120
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 376 GXFGXXXPGGGXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXG 507
G G GGG GG GGG P PPPP G
Sbjct: 78 GCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 36.7 bits (81), Expect = 0.036
Identities = 33/117 (28%), Positives = 38/117 (32%), Gaps = 3/117 (2%)
Frame = +1
Query: 376 GXFGXXXPGGGXG--GXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXK 549
G G P G G G P P G G G P P G PRGE K
Sbjct: 157 GEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAG----PRGEPGTEYK 212
Query: 550 XGXXGGPKXWG-KXXXKXXNXXGPXGRKXKKGPXPGXXXKXPPPXXXGEKTXPXXKG 717
G G P G + G G + G PG + PP G+ P +G
Sbjct: 213 PGQPGRPGPPGPRGEAGPAGQPGSPGNDGESG-KPGNAGRPGPPGAPGKNGTPGVRG 268
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 33.5 bits (73), Expect = 0.33
Identities = 26/105 (24%), Positives = 31/105 (29%), Gaps = 4/105 (3%)
Frame = +1
Query: 415 GXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPP--RGEXVXXXKXGXXGGPKXWGKX 588
G P P G P P G PP G+ + G G P G+
Sbjct: 137 GAPGPAGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQS 196
Query: 589 XXKXXNXXGPXGRKXKKGP--XPGXXXKXPPPXXXGEKTXPXXKG 717
+ GP GR +GP PG P G P G
Sbjct: 197 GQRSRGLPGPSGRPGPQGPPGAPGQPGSGSTPGPAGPPGPPGPNG 241
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 33.1 bits (72), Expect = 0.44
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 439 PKGGGXGXSXXGPXPPPPXXXXGAXXPP 522
P GGG G P PPPP G PP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGGPSLPP 47
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.44
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = -3
Query: 566 PPXSPXXXXXTXSPLG--GXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPPP 399
PP P T P G G P G G P PPP G G PP PPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG-MPPPPPPGMRYPGGMPPPPPP 353
Score = 31.5 bits (68), Expect = 1.3
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 3/87 (3%)
Frame = +3
Query: 477 PPPXPPKXXRGXGPPKGGXGXXXXXGGXXGTXXXGEXPXKXXXPKXAXGA---EXQKRXX 647
PPP PP R GPP G G P G R
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 648 PRGXXXGPPPPXXRXKNPPQXXGGXTP 728
G PPPP R PP G P
Sbjct: 357 SAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -3
Query: 485 GGXGPXXEXPXPPPX--GXXXXXGXPPXPPPGXXXP 384
G G P PPP G G PP PPPG P
Sbjct: 309 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 344
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.44
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = -3
Query: 566 PPXSPXXXXXTXSPLG--GXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXPPP 399
PP P T P G G P G G P PPP G G PP PPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG-MPPPPPPGMRYPGGMPPPPPP 363
Score = 31.5 bits (68), Expect = 1.3
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 3/87 (3%)
Frame = +3
Query: 477 PPPXPPKXXRGXGPPKGGXGXXXXXGGXXGTXXXGEXPXKXXXPKXAXGA---EXQKRXX 647
PPP PP R GPP G G P G R
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 648 PRGXXXGPPPPXXRXKNPPQXXGGXTP 728
G PPPP R PP G P
Sbjct: 367 SAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -3
Query: 485 GGXGPXXEXPXPPPX--GXXXXXGXPPXPPPGXXXP 384
G G P PPP G G PP PPPG P
Sbjct: 319 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 354
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 33.1 bits (72), Expect = 0.44
Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 397 PGG-GXGGXPXKXXXPKGGGXGXSXXGPXPP-PPXXXXGAXXPPRGEXVXXXKXG 555
PGG G GG P + P GGG G P PP PP G PPR K G
Sbjct: 618 PGGPGGGGGPPRG--PGGGGGGGPTGPPAPPKPPAKPRG--RPPRKSISPAVKNG 668
Score = 29.5 bits (63), Expect = 5.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 527 PLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPP 411
P GG P GGGG GP P PP G PP
Sbjct: 621 PGGGGGPPRGPGGGGGGGP--TGPPAPPKPPAKPRGRPP 657
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 979 GXXXXGFXPXXAPGGGXXGGXXXPPXWGXXPPPPLXXP 866
G G P PGGG GG PP P P P
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 33.1 bits (72), Expect = 0.44
Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 397 PGG-GXGGXPXKXXXPKGGGXGXSXXGPXPP-PPXXXXGAXXPPRGEXVXXXKXG 555
PGG G GG P + P GGG G P PP PP G PPR K G
Sbjct: 618 PGGPGGGGGPPRG--PGGGGGGGPTGPPAPPKPPAKPRG--RPPRKSISPAVKNG 668
Score = 29.5 bits (63), Expect = 5.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 527 PLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPP 411
P GG P GGGG GP P PP G PP
Sbjct: 621 PGGGGGPPRGPGGGGGGGP--TGPPAPPKPPAKPRGRPP 657
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 979 GXXXXGFXPXXAPGGGXXGGXXXPPXWGXXPPPPLXXP 866
G G P PGGG GG PP P P P
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 32.7 bits (71), Expect = 0.58
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = +3
Query: 480 PPXPPKXXRGXGPPKGGXGXXXXXGGXXGTXXXGEXPXKXXXPKXAXGAEXQKRXXPRGX 659
P PP+ +G G P G G P + A A+ Q P G
Sbjct: 617 PQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGG 676
Query: 660 XXGPPPP 680
GPPPP
Sbjct: 677 GQGPPPP 683
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 32.7 bits (71), Expect = 0.58
Identities = 19/67 (28%), Positives = 23/67 (34%)
Frame = +3
Query: 480 PPXPPKXXRGXGPPKGGXGXXXXXGGXXGTXXXGEXPXKXXXPKXAXGAEXQKRXXPRGX 659
P PP+ +G G P G G P + A A+ Q P G
Sbjct: 617 PQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGG 676
Query: 660 XXGPPPP 680
GPPPP
Sbjct: 677 GQGPPPP 683
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 32.7 bits (71), Expect = 0.58
Identities = 28/114 (24%), Positives = 35/114 (30%), Gaps = 3/114 (2%)
Frame = +1
Query: 322 GLNXXPXXGEKKXXXXXXGXFGXXXPGG--GXGGXPXKXXXP-KGGGXGXSXXGPXPPPP 492
G+ P G + F P G G G P P G G G P P
Sbjct: 117 GIAGQPGSGARVNPQTGRDSFCITCPAGPPGPAGTPGAPGAPGNAGAPGQDSFGGGPGP- 175
Query: 493 XXXXGAXXPPRGEXVXXXKXGXXGGPKXWGKXXXKXXNXXGPXGRKXKKGPXPG 654
P G+ + G G P G+ + GP GR +GP G
Sbjct: 176 ----AGPTGPTGDAGAPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPQGPAGG 225
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.77
Identities = 28/107 (26%), Positives = 30/107 (28%)
Frame = +1
Query: 397 PGGGXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXKXGXXGGPKX 576
P GG G P P G G GP P GA G+ G G P
Sbjct: 196 PSGGAAGPPGPPGPPGGPGNDGQPGGPGNP---GAPGAVTEVPGQQGPPGPPGPAGPPGP 252
Query: 577 WGKXXXKXXNXXGPXGRKXKKGPXPGXXXKXPPPXXXGEKTXPXXKG 717
G GP G GP G P G+ P G
Sbjct: 253 AGNAGQAGYAQPGPAGPPGDAGP-DGAPGNPGQPGAPGDAGAPGSGG 298
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 32.3 bits (70), Expect = 0.77
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 488 GGGXGPXXEXPXPPPXGXXXXXGXPPXPPP 399
G G G P PPP G PP PPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 32.3 bits (70), Expect = 0.77
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 488 GGGXGPXXEXPXPPPXGXXXXXGXPPXPPP 399
G G G P PPP G PP PPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 32.3 bits (70), Expect = 0.77
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 397 PGGGXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXP 519
PGGG GG GG G S P PPPP G P
Sbjct: 188 PGGGGGGMGGGGG--SGGSGGGSGRFPPPPPPYGGGGRRRP 226
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/80 (28%), Positives = 25/80 (31%)
Frame = +1
Query: 406 GXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXKXGXXGGPKXWGK 585
G G P G G S GP P P G PP + + G GGP G
Sbjct: 171 GPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGND----GQPGQPGGPGQDGA 226
Query: 586 XXXKXXNXXGPXGRKXKKGP 645
GP G GP
Sbjct: 227 SSAGGEAGPGPAGPPGPAGP 246
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +1
Query: 376 GXFGXXXPGGGXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRG-EXVXXXKX 552
G +G PGG G P P+GG G PPPP PP G V
Sbjct: 407 GGYGPPPPGGP--GAPGSYGPPQGGPGGFG-----PPPPGGPGAYGPPPTGFPPVGAPPP 459
Query: 553 GXXGGP 570
G G P
Sbjct: 460 GAAGAP 465
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 447 GGXGXFXXGXPPPXPPKXXRGXGPPKGGXG 536
GG G + G PPP P GPP+GG G
Sbjct: 404 GGPGGY--GPPPPGGPGAPGSYGPPQGGPG 431
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 397 PGGGXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRG 528
P G P P+G G G GP PP G+ PP+G
Sbjct: 386 PPGAFAPPPSAFGAPQGPG-GPGGYGPPPPGGPGAPGSYGPPQG 428
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +3
Query: 375 GXXWXXXXGGXXGGXXXXXXXXXGGGXGXFXXGXPPPXPPKXXRGXGPPKGGXGXXXXXG 554
G + GG G GGG PPP PP P G G
Sbjct: 269 GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSS 328
Query: 555 GXXG 566
G G
Sbjct: 329 GGGG 332
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 376 GXFGXXXPGGGXGGXPXKXXXPKGGGXGXSXXGPXPPPP 492
G G GGG GG GG G S PPPP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPP 305
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +1
Query: 376 GXFGXXXPGGGXGGXPXKXXXPK-GGGXGXSXXGPXPPPPXXXXGAXXP-PRGEXVXXXK 549
G G GGG GG GGG P PPPP A P G
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQS 327
Query: 550 XGXXGGPKXWG 582
G GG G
Sbjct: 328 SGGGGGSSYSG 338
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/64 (26%), Positives = 18/64 (28%)
Frame = +3
Query: 375 GXXWXXXXGGXXGGXXXXXXXXXGGGXGXFXXGXPPPXPPKXXRGXGPPKGGXGXXXXXG 554
G + GG G GGG PPP PP P G G
Sbjct: 269 GGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSS 328
Query: 555 GXXG 566
G G
Sbjct: 329 GGGG 332
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 376 GXFGXXXPGGGXGGXPXKXXXPKGGGXGXSXXGPXPPPP 492
G G GGG GG GG G S PPPP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPP 305
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = +1
Query: 376 GXFGXXXPGGGXGGXPXKXXXPK-GGGXGXSXXGPXPPPPXXXXGAXXP-PRGEXVXXXK 549
G G GGG GG GGG P PPPP A P G
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQS 327
Query: 550 XGXXGGPKXWG 582
G GG G
Sbjct: 328 SGGGGGSSYSG 338
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/82 (25%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Frame = +1
Query: 415 GXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXP--PRGEXVXXXKXGXXGGPKXWGKX 588
G P P G + P P G P P G+ + G G P G+
Sbjct: 137 GAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRG 196
Query: 589 XXKXXNXXGPXGRKXKKGPXPG 654
+ GP GR GP G
Sbjct: 197 GQRSRGLPGPSGRPGPPGPAGG 218
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 439 PKGGGXGXSXXGPXPPPPXXXXGAXXPP 522
P GGG G P PPPP PP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAPALPP 47
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 439 PKGGGXGXSXXGPXPPPPXXXXGAXXPP 522
P GGG G P PPPP PP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAPALPP 47
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +2
Query: 476 PXPXPPXXXXG--PXXPQGGXGFXPXXGGXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXX 649
P PP G P P GG G P GG G GG + G GG P
Sbjct: 151 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGG---QGGPPGHGGMGGPPPGQGG 207
Query: 650 PG 655
PG
Sbjct: 208 PG 209
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +2
Query: 476 PXPXPPXXXXG--PXXPQGGXGFXPXXGGXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXX 649
P PP G P P GG G P GG G GG + G GG P
Sbjct: 431 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGG---QGGPPGHGGMGGPPPGQGG 487
Query: 650 PG 655
PG
Sbjct: 488 PG 489
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 491 GGGGXGPXXEXPXPPPXGXXXXXGXPPXPPP 399
GGGG P PPP PP PPP
Sbjct: 28 GGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 30.7 bits (66), Expect = 2.3
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 376 GXFGXXXPGGGXGGXPXKXXXPKGGGX-GXSXXGPXPPPP 492
G F P G G + P+GG G S GP PPPP
Sbjct: 458 GNFQQQGPPRGTGNYFFQQGPPRGGQFHGGSQQGPPPPPP 497
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +1
Query: 400 GGGXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXP-PRGEXVXXXKXGXXGG 567
GGG GG GGG G P PPPP A P P E GG
Sbjct: 23 GGGGGGY-------SGGGGGGGDAAPPPPPPADAAPAPAPAPEPEAAPAAPAADAGG 72
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = -3
Query: 521 GGXXAPXXFXGGGGXG-PXXEXPXPPPXGXXXXXGXPPXPPP 399
GG P GGGG G P P PPP P P P
Sbjct: 75 GGYNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEP 116
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 399 GGXXGGXXXXXXXXXGGGXGXFXXGXPPPXPPKXXRGXGPPK 524
GG GG G G + G PPP PP G G K
Sbjct: 40 GGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPPPPQCGCGRKK 81
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEX-PXPPPXG---XXXXXGXP 414
P PP P PL G +P G P P PPP G G P
Sbjct: 232 PPAGSPPPPPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 413 PXPPPGXXXPXXP 375
P P G P P
Sbjct: 290 PPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEX-PXPPPXG---XXXXXGXP 414
P PP P PL G +P G P P PPP G G P
Sbjct: 253 PPAGSPPPPPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 413 PXPPPGXXXPXXP 375
P P G P P
Sbjct: 311 PPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 581 PXXXGPPXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEX-PXPPPXG---XXXXXGXP 414
P PP P PL G +P G P P PPP G G P
Sbjct: 238 PPAGSPPPPPPPKGSP--PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 413 PXPPPGXXXPXXP 375
P P G P P
Sbjct: 296 PPPRAGSPPPPPP 308
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.5 bits (63), Expect = 5.4
Identities = 27/106 (25%), Positives = 31/106 (29%), Gaps = 2/106 (1%)
Frame = +1
Query: 406 GXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXKXGXXGGPKXWGK 585
G G P P G P P P G PP + G G P K
Sbjct: 147 GQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPIGPPGPP-------GQAGAPGEPGSPAK 199
Query: 586 XXXKXXNXXGPXGRKXKKGP--XPGXXXKXPPPXXXGEKTXPXXKG 717
GP G+ ++GP PG P G K P G
Sbjct: 200 SEPAVPGPPGPPGQAGQQGPPGPPGSNGIDGAPGAPGAKGEPGTPG 245
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 5.4
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 482 GXGPXXEXPXPPPXGXXXXXGXPPXPPPGXXXPXXPXXXXXXFFSP 345
G P PPP G G PP PPP P P F P
Sbjct: 697 GVPPMFNLNAPPPPGIP---GYPPAPPPPGVGPPPPQGIPPMGFDP 739
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/82 (26%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Frame = +1
Query: 415 GXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPP--RGEXVXXXKXGXXGGPKXWGKX 588
G P P G P P G PP G + G G P GK
Sbjct: 139 GLPGPAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKS 198
Query: 589 XXKXXNXXGPXGRKXKKGPXPG 654
+ GP G +GP PG
Sbjct: 199 GQRGRGLPGPSGAPGSQGP-PG 219
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXG--GXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXX 649
P P PP P P+GG G P G G GG GG P
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAP 828
Query: 650 P 652
P
Sbjct: 829 P 829
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Frame = +1
Query: 397 PGG--GXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXKXGXXGGP 570
PGG G G P G S GP P P G P G G GGP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG----PAGPAGNDGAPGAPGGP 206
Query: 571 KXWGKXXXKXXNXXGPXGRKXKKGP 645
G GP G GP
Sbjct: 207 GEPGASEQGGPGEPGPAGPPGPAGP 231
Score = 28.7 bits (61), Expect = 9.5
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Frame = -3
Query: 581 PXXXGPPX--SPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPX 408
P GPP P GG P GG P P P P G G P
Sbjct: 182 PGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGP-PGPAGPAGNDGAPGT 240
Query: 407 PPPGXXXPXXP 375
PG P P
Sbjct: 241 GGPGPAGPKGP 251
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +3
Query: 399 GGXXGGXXXXXXXXXGGGXGXFXXGXPPPXPPKXXRGXGPPKGGXGXXXXXGGXXGTXXX 578
G GG GGG G G P PP PP G G GG G+
Sbjct: 180 GYTSGGSGGPGGPGSGGGGGG-PGGYPSAPPPYDDYSKPPPYGFRGDSQSGGGCQGSSSG 238
Query: 579 G 581
G
Sbjct: 239 G 239
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Frame = +1
Query: 397 PGG--GXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXKXGXXGGP 570
PGG G G P G S GP P P G P G G GGP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG----PAGPAGNDGAPGAPGGP 206
Query: 571 KXWGKXXXKXXNXXGPXGRKXKKGP 645
G GP G GP
Sbjct: 207 GEPGASEQGGPGEPGPAGPPGPAGP 231
Score = 28.7 bits (61), Expect = 9.5
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Frame = -3
Query: 581 PXXXGPPX--SPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPX 408
P GPP P GG P GG P P P P G G P
Sbjct: 182 PGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGP-PGPAGPAGNDGAPGT 240
Query: 407 PPPGXXXPXXP 375
PG P P
Sbjct: 241 GGPGPAGPKGP 251
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = +1
Query: 376 GXFGXXXPGGGXGGX--PXKXXXP-KGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXX 546
G G P G GG P + P + G G S P P P G PP G+
Sbjct: 188 GAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPGPRGPP-GQAGSPG 246
Query: 547 KXGXXGGP 570
G GGP
Sbjct: 247 GNGQPGGP 254
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 6/72 (8%)
Frame = -3
Query: 581 PXXXGPPX--SPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPP---PXGXXXXXGX 417
P GPP +P + P G GG GP PP P G G
Sbjct: 191 PPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA 250
Query: 416 PP-XPPPGXXXP 384
PP PPG P
Sbjct: 251 PPSGGPPGPFNP 262
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXG--GXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXX 649
P P PP P P+GG G P G G GG GG P
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAP 828
Query: 650 P 652
P
Sbjct: 829 P 829
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Frame = +1
Query: 397 PGG--GXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXKXGXXGGP 570
PGG G G P G S GP P P G P G G GGP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG----PAGPAGNDGAPGAPGGP 206
Query: 571 KXWGKXXXKXXNXXGPXGRKXKKGP 645
G GP G GP
Sbjct: 207 GEPGASEQGGPGEPGPAGPPGPAGP 231
Score = 28.7 bits (61), Expect = 9.5
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Frame = -3
Query: 581 PXXXGPPX--SPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPX 408
P GPP P GG P GG P P P P G G P
Sbjct: 182 PGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGP-PGPAGPAGNDGAPGT 240
Query: 407 PPPGXXXPXXP 375
PG P P
Sbjct: 241 GGPGPAGPKGP 251
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Frame = +1
Query: 397 PGG--GXGGXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXKXGXXGGP 570
PGG G G P G S GP P P G P G G GGP
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPG----PAGPAGNDGAPGAPGGP 206
Query: 571 KXWGKXXXKXXNXXGPXGRKXKKGP 645
G GP G GP
Sbjct: 207 GEPGASEQGGPGEPGPAGPPGPAGP 231
Score = 28.7 bits (61), Expect = 9.5
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Frame = -3
Query: 581 PXXXGPPX--SPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPX 408
P GPP P GG P GG P P P P G G P
Sbjct: 182 PGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGP-PGPAGPAGNDGAPGT 240
Query: 407 PPPGXXXPXXP 375
PG P P
Sbjct: 241 GGPGPAGPKGP 251
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXGGXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXXPG 655
P P P GP PQG G P G G G +K G P PG
Sbjct: 306 PCPQGPLGPAGPAGPQGNLG-GPGVFGEKGPQGPVGAPGQKGRRGEKGKDGEPGAPGAPG 364
Query: 656 XSXRXPP 676
+ + P
Sbjct: 365 ENVKEVP 371
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = -3
Query: 563 PXSPXXXXXTXSPLGGXXAPXXFXGGGGXGPXXEXPXPPPXGXXXXXGXPPXP-PPG 396
P P P G A GGG GP P P G G P P PG
Sbjct: 179 PAGPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAPG 235
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -3
Query: 497 FXGGGGXGPXXEXPXPPP-XGXXXXXGXPPXPPPGXXXP 384
F GGG G P PPP G G PPP P
Sbjct: 19 FPSGGGGGCGCAPPPPPPACGCGGGGGGYAAPPPAYAAP 57
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXGGXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXXPG 655
P P P GP P G G GG D + G K G G P + PG
Sbjct: 145 PCPQGPPGVQGPPGPAGDAGLDGQPGGPGQDGQPGQPGPKGPPGVNGQPGA-PGQDGNPG 203
Query: 656 XSXRXPP 676
P
Sbjct: 204 QDAPSEP 210
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 28.7 bits (61), Expect = 9.5
Identities = 22/82 (26%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Frame = +1
Query: 415 GXPXKXXXPKGGGXGXSXXGPXPPPPXXXXGAXXPP--RGEXVXXXKXGXXGGPKXWGKX 588
G P P G P P G PP G + G G P GK
Sbjct: 139 GLPGPAGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKS 198
Query: 589 XXKXXNXXGPXGRKXKKGPXPG 654
+ GP G +GP PG
Sbjct: 199 GQRGRGLPGPSGAPGPQGP-PG 219
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXGGXXGDXKXGG 583
P P PP P P+GG G P G GG
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical
protein K02E11.10 protein.
Length = 360
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +1
Query: 397 PGGGXGGXPXKXXXPK-GGGXGXSXXGPXPPPPXXXXGAXXPPRGEXVXXXKXGXXGGP 570
P GG GG P GGG G P P P G G GGP
Sbjct: 78 PSGGFGGAGGSYAAPALGGGLGGFGGAPAPAPAFGGLGGGYQAAPALGGGLGGGLGGGP 136
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXGGXXGDXKXGG 583
P P PP P P+GG G P G GG
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = +2
Query: 476 PXPXPPXXXXGPXXPQGGXGFXPXXGGXXGDXKXGGXXXKKXXTXXGXXGGXPKKXXXPG 655
P P P GP P G G G D + G K G G P PG
Sbjct: 152 PCPQGPAGPPGPPGPAGDAGSDGSPGAPGSDGQPGAAGDKGPAGPNGNPGA-PGSPGKPG 210
Query: 656 XSXRXPP 676
+ P
Sbjct: 211 EDGKSEP 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.309 0.148 0.496
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,898,594
Number of Sequences: 27780
Number of extensions: 245523
Number of successful extensions: 1605
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3620756926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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