Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_M18
(1275 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 83 4e-16
U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical pr... 78 2e-14
AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical ... 66 5e-11
U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical p... 64 2e-10
AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical ... 64 3e-10
U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical pr... 29 5.3
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 83.0 bits (196), Expect = 4e-16
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 10/252 (3%)
Frame = +1
Query: 184 HKFLXSFDHVLSDCDGVIWTQD-SLPRVGEFFK-QMKKRGKTVNFVSNNSLRSRANYEAQ 357
++ L ++D L D DGV+WT D +P E+ ++ K V ++NNS ++ Y +
Sbjct: 9 NELLANYDTFLFDADGVLWTGDIPVPGAIEWINLLLEDPSKKVFVLTNNSTKTLEQYMKK 68
Query: 358 FKAASIDN-GFESLIIPSIAVAEYLKSVT---FNKTVYCVTCTETKRVLEAH-GFKC-KE 519
+ + G ++I P+I +A+YLKS + VY + K LE G KC
Sbjct: 69 IEKLGFGHLGRNNVISPAIVLADYLKSNADKFSGEYVYLIGTENLKATLENDGGVKCFGT 128
Query: 520 GPD-LGPEYYGEYIQYLEDDEEIGAVVFDSDFKINLPKMYRAITYLKRPEVLFINGATDR 696
GPD + G++I ++ AVV D + PK+ +A YL+ P V ++ D
Sbjct: 129 GPDSIRDHTDGDFIHKVDMSIAPKAVVCSYDAHFSYPKIMKASNYLQDPSVEYLVTNQDY 188
Query: 697 MVPMKXXXXXXXXXXXXXXXXXEVK-REPVLLGKPGRVFGEFAMKRAGITDPSRVLFIGD 873
P V R+P + GKP + +F ++RA + DP R + GD
Sbjct: 189 TFPGPVPGVVIPGSGATSAAVTAVTGRDPKVFGKPHKPMADFLLRRAHV-DPKRTVMFGD 247
Query: 874 MIAQXVSLGKSS 909
+ + G ++
Sbjct: 248 RLDTDIMFGNAN 259
>U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical
protein C45E5.1 protein.
Length = 303
Score = 77.8 bits (183), Expect = 2e-14
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 14/257 (5%)
Frame = +1
Query: 187 KFLXSFDHVLSDCDGVIWTQD-SLPRVGEFFKQ-MKKRGKTVNFVSNNSLRSRANYEAQF 360
+ L +FD + D DGV+WT D +P E+ + K+V +NNS ++ Y +
Sbjct: 10 QLLSNFDTFVFDADGVLWTGDIPIPGAAEWINTLLDDPEKSVFITTNNSTKTLEQYMKKV 69
Query: 361 KAASIDN-GFESLIIPSIAVAEYLK--SVTF-NKTVYCVTCTETKRVL-EAHGFKC-KEG 522
K G E+L+ P+I + +Y K S F N+ +Y + K+ L E G KC G
Sbjct: 70 KKMRFGRLGRENLLSPTIVLCDYFKQNSDKFENQYIYLIGVENLKKSLEEGGGVKCFGTG 129
Query: 523 PDLGPEYY-GEYIQYLEDDEEI-GAVVFDSDFKINLPKMYRAITYLKRPEVLFINGATDR 696
PD Y G++I ++ +I AVV D + PK+ +A +L P V F+ D
Sbjct: 130 PDHKDNYTDGDFINEVDVKSKIPKAVVVSFDSHFSYPKLMKAANFLADPLVEFLVCNEDS 189
Query: 697 MVPMKXXXXXXXXXXXXXXXXXEVK-REP-VLLGKPGRVFGEFAMKR--AGITDPSRVLF 864
P V R+P ++ GKP F R AG + R +
Sbjct: 190 TFPGPVPGMILPETGPWSAAIQNVSGRKPDIVFGKPHEQLANFLKSRVQAGKFNSERTVM 249
Query: 865 IGDMIAQXVSLGKSSWF 915
GD + + GK++ F
Sbjct: 250 FGDRLDTDMMFGKNNGF 266
>AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical
protein C53A3.2 protein.
Length = 349
Score = 66.1 bits (154), Expect = 5e-11
Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 10/271 (3%)
Frame = +1
Query: 121 KVLSIMGXESKHLLDLSVEXLHKFLXSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRG 297
++ S + + L L + K + + D + D DGV+W +S +P + K
Sbjct: 29 RIHSGLDPNCRSTLPLDPKSFSKVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHN 88
Query: 298 KTVNFVSNNSLRSRANYEAQFKAASIDNGF---ESLIIPSIAVAEYLKSVTFN-KTVYCV 465
K + ++NN+ +SRA Y + ++ +L+ P+ VA+ L + K VY +
Sbjct: 89 KQIIVLTNNATKSRAVYAKKLAKLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLI 148
Query: 466 TCTETKRVLEAHGFKC-KEGPDLGPEYY---GEYIQYLEDDEEIGAVVFDSDFKINLPKM 633
+ ++ G + GP+ + G ++ ++ +E +GAVV + + KM
Sbjct: 149 GEQGLRDEMDELGIEYFGHGPEKKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYVKM 208
Query: 634 YRAITYLKRPEVLFINGATDRMVP-MKXXXXXXXXXXXXXXXXXEVKREPVLLGKPGRVF 810
+A YL+ VLF+ D P R+P+ +GKP
Sbjct: 209 MKASNYLREEGVLFVATNEDETCPGPNPEVVIPDAGPIVAAIKCASGRDPLTVGKPCTPA 268
Query: 811 GEFAMKRAGITDPSRVLFIGDMIAQXVSLGK 903
+ +KR +PSR + IGD V G+
Sbjct: 269 FNY-IKRKWNINPSRTMMIGDRTNTDVKFGR 298
>U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical
protein K09H11.7 protein.
Length = 322
Score = 64.1 bits (149), Expect = 2e-10
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 10/249 (4%)
Frame = +1
Query: 187 KFLXSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNSLRSRANYEAQFK 363
K + + D + D DGV+W +S +P + K K + ++NN+ +SRA Y +
Sbjct: 24 KVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLA 83
Query: 364 AASIDNGF---ESLIIPSIAVAEYLKSVTFN-KTVYCVTCTETKRVLEAHGFKC-KEGPD 528
++ +L+ P+ VA+ L + K VY + + ++ G + GP+
Sbjct: 84 KLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPE 143
Query: 529 LGPEYY---GEYIQYLEDDEEIGAVVFDSDFKINLPKMYRAITYLKRPEVLFINGATDRM 699
+ G ++ ++ +E +GAVV + + KM +A YL+ VLF+ D
Sbjct: 144 KKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYVKMMKASNYLREEGVLFVATNEDET 203
Query: 700 VP-MKXXXXXXXXXXXXXXXXXEVKREPVLLGKPGRVFGEFAMKRAGITDPSRVLFIGDM 876
P R+P+ +GKP + +KR +PSR + IGD
Sbjct: 204 CPGPNPEVVIPDAGPIVAAIKCASGRDPLTVGKPCTPAFNY-IKRKWNINPSRTMMIGDR 262
Query: 877 IAQXVSLGK 903
V G+
Sbjct: 263 TNTDVKFGR 271
>AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical
protein F44E7.2 protein.
Length = 335
Score = 63.7 bits (148), Expect = 3e-10
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 10/249 (4%)
Frame = +1
Query: 187 KFLXSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNSLRSRANYEAQFK 363
K + + D + D DGV+W +S +P + K K + ++NN+ +SRA Y +
Sbjct: 41 KVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLA 100
Query: 364 AASIDNGF---ESLIIPSIAVAEYLKSVTFN-KTVYCVTCTETKRVLEAHGFKC-KEGPD 528
++ +L+ P+ VA+ L + K VY + + ++ G + GP+
Sbjct: 101 KLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPE 160
Query: 529 LGPEYY---GEYIQYLEDDEEIGAVVFDSDFKINLPKMYRAITYLKRPEVLFINGATDRM 699
+ G ++ ++ +E +GAVV + + KM +A YL+ VLF+ D
Sbjct: 161 KKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYIKMMKASNYLREEGVLFVATNEDET 220
Query: 700 VP-MKXXXXXXXXXXXXXXXXXEVKREPVLLGKPGRVFGEFAMKRAGITDPSRVLFIGDM 876
P R+P+ +GKP + +KR +PSR + IGD
Sbjct: 221 CPGPNPEVVIPDAGPIVAAIKCASGRDPLTVGKPCTPAFNY-IKRKWNINPSRTMMIGDR 279
Query: 877 IAQXVSLGK 903
V G+
Sbjct: 280 TNTDVKFGR 288
>U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical
protein F08F3.8 protein.
Length = 380
Score = 29.5 bits (63), Expect = 5.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 370 SIDNGFESLIIPSIAVAEYLK 432
+IDNGFE +++P + A Y K
Sbjct: 50 AIDNGFEQILVPKVCAANYDK 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,476,462
Number of Sequences: 27780
Number of extensions: 426522
Number of successful extensions: 1060
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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