Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M16
         (1079 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VKQ5 Cluster: CG17124-PA, isoform A; n=7; Endopterygo...   101   4e-20
UniRef50_Q7YX00 Cluster: Putative uncharacterized protein; n=2; ...    54   8e-06
UniRef50_Q4P3I3 Cluster: Putative uncharacterized protein; n=1; ...    36   1.8  

>UniRef50_Q9VKQ5 Cluster: CG17124-PA, isoform A; n=7;
           Endopterygota|Rep: CG17124-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 124

 Score =  101 bits (241), Expect = 4e-20
 Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
 Frame = +3

Query: 357 LSPTERSPAKAGLHVNFSDKG-EVKERREKFLTAKYGSHQMALIRKRLAVEMWLYXELQX 533
           ++  ERSP +  L VNF++KG EVKERREKFLTAKYGSHQM+LIRKRLAVEMWLY ELQ 
Sbjct: 8   MNDCERSPNRTNLRVNFNEKGAEVKERREKFLTAKYGSHQMSLIRKRLAVEMWLYDELQK 67

Query: 534 LYEIPKE 554
           L++ P E
Sbjct: 68  LFDPPNE 74


>UniRef50_Q7YX00 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 112

 Score = 53.6 bits (123), Expect = 8e-06
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = +3

Query: 396 HVNFSDKGEVKERREKFLTAKYGSHQMALIRKRLAVEMWLYXELQXLY 539
           H  F D     E R + LT KYG HQMALIRKR+ VE W+  E+  L+
Sbjct: 7   HARFGDSKSRMEDRSRVLTMKYGKHQMALIRKRMKVENWIETEVTKLF 54


>UniRef50_Q4P3I3 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 657

 Score = 35.9 bits (79), Expect = 1.8
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +2

Query: 386 GRTARQLQR*GRGKRATREVPNGEVWQPSNGTDTQATRGRNVALXXAAKXLRNTEGKXRG 565
           G+  R  +R GR KR+ +E  N +  QPS+ + +   R R++        LRN++   RG
Sbjct: 122 GKLKRHFRR-GR-KRSEKEASNPDSSQPSSASSSAVKRKRHLVSRWTRGNLRNSDDTMRG 179

Query: 566 GGXPEVXVKXXNSXK 610
           G    V ++   S +
Sbjct: 180 GVSDTVSIRSRRSAR 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,445,976
Number of Sequences: 1657284
Number of extensions: 5551068
Number of successful extensions: 17725
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17691
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 104494669051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)