Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_M11
(1248 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical pr... 81 2e-15
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 31 1.7
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 31 1.7
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 31 1.7
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 31 1.7
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 30 3.0
AF016666-3|AAB66085.1| 212|Caenorhabditis elegans Hypothetical ... 30 3.9
Z81482-3|CAB03955.2| 392|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 29 6.9
U10414-10|AAA19077.1| 176|Caenorhabditis elegans Hypothetical p... 29 6.9
Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical pr... 29 9.1
>Z81042-3|CAB02794.2| 660|Caenorhabditis elegans Hypothetical protein
C27H6.3 protein.
Length = 660
Score = 81.0 bits (191), Expect = 2e-15
Identities = 58/197 (29%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Frame = +2
Query: 458 ALEKWKQERIAEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPRSQLRI------EKE-- 613
AL W++ +I EMG+ F +M++GTK H +++ + ++ EK
Sbjct: 444 ALYLWQKAKIDEMGLSAFKSSMTERMSLGTKTHTKVEEMLKLGHHESKLNNLIDNEKNAA 503
Query: 614 VEGVWVSVADVLKSISSPK-AI-ESNVVHPVLKYRGIFDAIADYEDKPTLIEWK-----K 772
+ S V+ I P+ AI E V HP L Y+G FDA+ Y+D +++WK
Sbjct: 504 IRNFMKSAMPVILEIQDPQNAICEKKVRHPTLAYQGRFDAVVKYKDYWNILDWKTTPARS 563
Query: 773 SDKPRKSIALTYDNPV-QLAAYFGAVCNDLNYKHMK-VRDALLVIAYTDGSKADVFXLST 946
S ++ +L+Y + V QLAAY A +D+ ++++ V+ +LV DGS A+V+ +S
Sbjct: 564 SFSTQREDSLSYTSYVRQLAAYASAFNHDVRFENLPFVKQGILVSLKEDGSPAEVYQISE 623
Query: 947 DKLREHWAQWLIRLEEY 997
D++ + +L E+
Sbjct: 624 DEMMRTLEEVTEKLNEF 640
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 31.1 bits (67), Expect = 1.7
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Frame = +2
Query: 437 MTEESRLALEKWKQERIAEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR-SQLRIEKE 613
M EE + L+ +++R GVE F + +A+M TK H L + Q + L E+E
Sbjct: 794 MKEEYEVKLQLAEKDR---QGVENFGKECEARMNELTKIHEMLMEEHDQLKVDHLHTEEE 850
Query: 614 VEGVWVSVADVLKSIS----SPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDK 781
VE + + L+ ++ +A SN + + + +A+ + +++ +E +K
Sbjct: 851 VERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKN--EAVTELQERVQKLEDVVKEK 908
Query: 782 PRKSIALTYD 811
K IAL D
Sbjct: 909 EDKEIALRRD 918
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 31.1 bits (67), Expect = 1.7
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Frame = +2
Query: 437 MTEESRLALEKWKQERIAEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR-SQLRIEKE 613
M EE + L+ +++R GVE F + +A+M TK H L + Q + L E+E
Sbjct: 794 MKEEYEVKLQLAEKDR---QGVENFGKECEARMNELTKIHEMLMEEHDQLKVDHLHTEEE 850
Query: 614 VEGVWVSVADVLKSIS----SPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDK 781
VE + + L+ ++ +A SN + + + +A+ + +++ +E +K
Sbjct: 851 VERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKN--EAVTELQERVQKLEDVVKEK 908
Query: 782 PRKSIALTYD 811
K IAL D
Sbjct: 909 EDKEIALRRD 918
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 31.1 bits (67), Expect = 1.7
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Frame = +2
Query: 437 MTEESRLALEKWKQERIAEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR-SQLRIEKE 613
M EE + L+ +++R GVE F + +A+M TK H L + Q + L E+E
Sbjct: 554 MKEEYEVKLQLAEKDR---QGVENFGKECEARMNELTKIHEMLMEEHDQLKVDHLHTEEE 610
Query: 614 VEGVWVSVADVLKSIS----SPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDK 781
VE + + L+ ++ +A SN + + + +A+ + +++ +E +K
Sbjct: 611 VERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKN--EAVTELQERVQKLEDVVKEK 668
Query: 782 PRKSIALTYD 811
K IAL D
Sbjct: 669 EDKEIALRRD 678
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 31.1 bits (67), Expect = 1.7
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Frame = +2
Query: 437 MTEESRLALEKWKQERIAEMGVEEFNRFYQAQMAVGTKFHNTLKDYFTQPR-SQLRIEKE 613
M EE + L+ +++R GVE F + +A+M TK H L + Q + L E+E
Sbjct: 794 MKEEYEVKLQLAEKDR---QGVENFGKECEARMNELTKIHEMLMEEHDQLKVDHLHTEEE 850
Query: 614 VEGVWVSVADVLKSIS----SPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDK 781
VE + + L+ ++ +A SN + + + +A+ + +++ +E +K
Sbjct: 851 VERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKN--EAVTELQERVQKLEDVVKEK 908
Query: 782 PRKSIALTYD 811
K IAL D
Sbjct: 909 EDKEIALRRD 918
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 30.3 bits (65), Expect = 3.0
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +2
Query: 683 NVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDKPRKSIALTYDNPVQLAAYFGAVCNDLN 862
++ H L+Y GI+ + DY IE + D+ T+ N + +F A +D++
Sbjct: 297 DITHSSLRYAGIYLKMQDYGGTKEEIENQLRDE-----TTTFSNVDAMLFFFDASVDDMS 351
Query: 863 YKHMKVRDAL-LVIAYTDGSKADVFXLSTDKL 955
+ AL L++ ++ +K +F TD L
Sbjct: 352 ADFDHYQKALKLLLKHSPEAKIFIFLTKTDLL 383
>AF016666-3|AAB66085.1| 212|Caenorhabditis elegans Hypothetical
protein B0281.6 protein.
Length = 212
Score = 29.9 bits (64), Expect = 3.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 779 YQTSSTRLKSVCLHNQQWHQKFPYTSVRGVQ 687
Y R+ S C+ N +W + +P S+R +Q
Sbjct: 173 YVDDPNRVWSFCIFNSEWSENYPLKSLRDIQ 203
>Z81482-3|CAB03955.2| 392|Caenorhabditis elegans Hypothetical
protein C40H5.4 protein.
Length = 392
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 765 HSIKVGLSS*SAMASKIPLYFSTGCTTFDSMAFGEDILFNT 643
H +VG S A+ I L G T DS FG+D +F +
Sbjct: 51 HQFRVGSVSKPVTAAAIMLLIDKGHFTLDSKLFGKDSIFGS 91
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 29.1 bits (62), Expect = 6.9
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +2
Query: 428 NKTMTEESRLALEKWKQERIAEMGVEEFNR 517
N+T+ +++ ++LE W+Q R GV + ++
Sbjct: 287 NQTIMDKTSMSLENWRQNRANSFGVHDISK 316
>U10414-10|AAA19077.1| 176|Caenorhabditis elegans Hypothetical
protein F42A10.6 protein.
Length = 176
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +2
Query: 626 WVSVADVLKSISSPKAIESNVVHPVLKYRGIFDAIADYEDKPTLIEWKKSDKPRKSIALT 805
W SV +++ A + V P+ + + D+ D P +I K+DKP + L
Sbjct: 97 WSSVP-TFGLLNNIDACTNGVPCPIEPKNKVINLELDFSDTPAIINLLKNDKPYQLEYLL 155
Query: 806 YDNP 817
+D+P
Sbjct: 156 HDDP 159
>Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical
protein F02H6.1 protein.
Length = 537
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 446 ESRLALEKWKQERIAEMGVEEFNRFYQAQ 532
+S+ A E+ +++R+ E+G FNRF Q Q
Sbjct: 242 DSQFAQEEQRRDRLREIGQRIFNRFEQQQ 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,116,372
Number of Sequences: 27780
Number of extensions: 487854
Number of successful extensions: 1430
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3464240056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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