Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M11
         (1248 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    24   3.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   3.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   3.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   3.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   5.5  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 710 YTSVRGVQHSILWLLEKIYFSTHLLQTPIHPPLPSLYEAGYEVE*SNP 567
           YT+  G Q SI ++ ++  F       P  PP+P   +   E   ++P
Sbjct: 77  YTAPDGQQVSITYVADENGFQVQGSHIPTAPPIPPEIQRALEWNAAHP 124


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 681 RMLYTPY*SIGEFLMPLLIM 740
           R  Y  Y S+G F +PLL+M
Sbjct: 193 RQGYVIYSSLGSFFIPLLLM 212


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 681 RMLYTPY*SIGEFLMPLLIM 740
           R  Y  Y S+G F +PLL+M
Sbjct: 193 RQGYVIYSSLGSFFIPLLLM 212


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 681 RMLYTPY*SIGEFLMPLLIM 740
           R  Y  Y S+G F +PLL+M
Sbjct: 193 RQGYVIYSSLGSFFIPLLLM 212


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -1

Query: 315 VPHTTDVFKPRIAVLFKRTPKXFKQC-LVFCHIL 217
           VP+T   F PR AV     P   + C LV  H L
Sbjct: 145 VPYTVKNFHPRCAVNNYNDPSNVRNCELVGLHDL 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,527
Number of Sequences: 438
Number of extensions: 5707
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42622365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)