Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M10
         (1270 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.30 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   2.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   2.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.9  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   4.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   6.4  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   6.4  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 0.30
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 514 YYCHPTYEVSVYTIWSGQPWNRMFGNLTLI 603
           Y+    Y++  Y  W  + W+    NL L+
Sbjct: 61  YFISNVYQILAYNFWKKKYWSEFLANLKLL 90


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 517 YCHPTYEVSVYTIWSGQPWNRMFGNL 594
           YC   Y + V T +  + W R+  NL
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTRLLKNL 101


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 171 TCSCTHPYTXGTCCPYTALCS 233
           TC C + YT   C  Y   CS
Sbjct: 84  TCHCPYGYTGKDCGEYVDWCS 104


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 345 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 235
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 345 CSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGP 235
           C+  ++ T +SHC+C   +  G    +L+    + GP
Sbjct: 140 CTPNATNTVWSHCQCVLAD--GVERGILTANRMIPGP 174


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 436 QTRRNPEWRMRTT 398
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -3

Query: 914 YRCRHFRTDNSHNKPDVNTHAKYTRLTGFIFLYCHRI 804
           Y C +    NSH K   N +    R   +   YCH +
Sbjct: 266 YTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSL 302


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -3

Query: 914 YRCRHFRTDNSHNKPDVNTHAKYTRLTGFIFLYCHRI 804
           Y C +    NSH K   N +    R   +   YCH +
Sbjct: 24  YTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSL 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,498
Number of Sequences: 336
Number of extensions: 4725
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37302243
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)