Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M10
         (1270 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0490 + 22672241-22674679                                         31   1.9  
03_02_0994 - 13067254-13067379,13067483-13067521,13067824-130678...    30   3.4  
03_06_0422 + 33818887-33819996                                         29   5.9  

>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 248 PHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPP 388
           P + + T+T  P  L    R+W   + E+VLEQ S    + MP  PP
Sbjct: 297 PQQPVETVTPTPPPLAR-SRRWNPEMLEVVLEQESRVEETTMPPPPP 342


>03_02_0994 -
           13067254-13067379,13067483-13067521,13067824-13067893,
           13068025-13068116,13068237-13068319,13068590-13068633,
           13068682-13068800,13068883-13068915,13069152-13069239,
           13069364-13069413
          Length = 247

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +3

Query: 99  CLAASPDRPCSQVCHLLQLCTGAPTCSCTHPYTXGTCCPYTALC 230
           CL    ++P +QVC+   +C G   CS    +     C    LC
Sbjct: 49  CLVCDTEQPVAQVCYNCGVCMGEYFCSACKFFDDDVRCRCCLLC 92


>03_06_0422 + 33818887-33819996
          Length = 369

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -2

Query: 489 ESEEQQERHHKTEQTHGLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTS 319
           E   ++ER  + E+T  L    + N   E ++L+G       D+  +D SNTSSG S
Sbjct: 156 ERMRERERERRRERTESLILINSNN---EAIILQGT---FGPDDNQDDSSNTSSGVS 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,433,347
Number of Sequences: 37544
Number of extensions: 554394
Number of successful extensions: 1602
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3934202376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)