Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M10
         (1270 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86741-2|BAA21841.1|   92|Caenorhabditis elegans ATP synthase su...    74   2e-13
D86740-2|BAA13165.1|   92|Caenorhabditis elegans ATP synthase su...    74   2e-13
AC090999-18|AAK26152.1|  116|Caenorhabditis elegans Hypothetical...    74   2e-13
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    30   4.0  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    30   4.0  
Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical p...    29   9.3  

>D86741-2|BAA21841.1|   92|Caenorhabditis elegans ATP synthase
           subunit protein.
          Length = 92

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 39/70 (55%), Positives = 42/70 (60%)
 Frame = +1

Query: 229 AVRSFQXTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 408
           A R    T   KDIDSAAK+                    FG+L+IGYARNPSLKQQLFS
Sbjct: 6   AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65

Query: 409 YAILGFALSE 438
           YAILGFALSE
Sbjct: 66  YAILGFALSE 75


>D86740-2|BAA13165.1|   92|Caenorhabditis elegans ATP synthase
           subunit protein.
          Length = 92

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 39/70 (55%), Positives = 42/70 (60%)
 Frame = +1

Query: 229 AVRSFQXTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 408
           A R    T   KDIDSAAK+                    FG+L+IGYARNPSLKQQLFS
Sbjct: 6   AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 65

Query: 409 YAILGFALSE 438
           YAILGFALSE
Sbjct: 66  YAILGFALSE 75


>AC090999-18|AAK26152.1|  116|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.3 protein.
          Length = 116

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 39/70 (55%), Positives = 42/70 (60%)
 Frame = +1

Query: 229 AVRSFQXTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFS 408
           A R    T   KDIDSAAK+                    FG+L+IGYARNPSLKQQLFS
Sbjct: 30  AARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFS 89

Query: 409 YAILGFALSE 438
           YAILGFALSE
Sbjct: 90  YAILGFALSE 99


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -2

Query: 375  GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYX 199
            G   D+  + CS  S G + S  C C       +    +    G  GP C E CR  RY 
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591

Query: 198  LCMGGYSCKWAHQC 157
                G SC+   QC
Sbjct: 1592 ----GQSCQNKCQC 1601


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -2

Query: 375  GIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYX 199
            G   D+  + CS  S G + S  C C       +    +    G  GP C E CR  RY 
Sbjct: 1534 GFQGDKCEQKCSEGSFGPACSQQCNCGKYKCDATDGKCICP-VGRHGPLCEEECRPGRY- 1591

Query: 198  LCMGGYSCKWAHQC 157
                G SC+   QC
Sbjct: 1592 ----GQSCQNKCQC 1601


>Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical
           protein C54D10.6 protein.
          Length = 348

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 526 PTYEVSVYTIWSGQPWNRMFGNLTLIVMQ 612
           P + VSVY I    PWN +F    ++V Q
Sbjct: 29  PLFLVSVYCILKKSPWNMVFYKWLILVFQ 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,532,627
Number of Sequences: 27780
Number of extensions: 460851
Number of successful extensions: 1491
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3537281262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)