Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M09
         (1242 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56197 Cluster: PREDICTED: hypothetical protein;...   120   6e-26
UniRef50_A0YSJ2 Cluster: Putative uncharacterized protein; n=3; ...    36   1.6  
UniRef50_O75096 Cluster: Low-density lipoprotein receptor-relate...    36   2.9  
UniRef50_Q7NBJ1 Cluster: SufC; n=1; Mycoplasma gallisepticum|Rep...    35   3.8  
UniRef50_Q0RQP7 Cluster: Putative uncharacterized protein; n=1; ...    35   5.0  
UniRef50_Q9TVF3 Cluster: Calcium-binding protein Sj66; n=5; Schi...    35   5.0  

>UniRef50_UPI0000D56197 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 330

 Score =  120 bits (290), Expect = 6e-26
 Identities = 67/103 (65%), Positives = 76/103 (73%), Gaps = 11/103 (10%)
 Frame = +1

Query: 634 STQYASSSMLDEI---DSGASVDALKTRSLPAFLRPKPRPLSTEDDLQQLYAKVSLSKKY 804
           + QYASSS+LDE+   D  +    LKTRSLPA++R KPRPLSTEDDL  LYAKV+ SKK 
Sbjct: 227 NVQYASSSILDEVGTKDENSDEPTLKTRSLPAWVRSKPRPLSTEDDLNDLYAKVNFSKKR 286

Query: 805 KNRMRNEHAAIIALSKSHSQFLXAD--------AVIVYDQRTA 909
           KNRMRN+ AAIIALSKS SQFL  D        AVIVYD+RTA
Sbjct: 287 KNRMRNDEAAIIALSKSRSQFLHKDTDSLVDNEAVIVYDERTA 329


>UniRef50_A0YSJ2 Cluster: Putative uncharacterized protein; n=3;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 166

 Score = 36.3 bits (80), Expect = 1.6
 Identities = 26/66 (39%), Positives = 37/66 (56%)
 Frame = +1

Query: 658 MLDEIDSGASVDALKTRSLPAFLRPKPRPLSTEDDLQQLYAKVSLSKKYKNRMRNEHAAI 837
           +L  + SG +  A KTRS P+F++PK +PL  ED   +L       +K  +R  NEH   
Sbjct: 86  LLAGVMSGKTT-ARKTRSTPSFVKPKLQPLKAEDLANRLGVTPETVEKEAHR-GNEH--F 141

Query: 838 IALSKS 855
           +A SKS
Sbjct: 142 LAWSKS 147


>UniRef50_O75096 Cluster: Low-density lipoprotein receptor-related
            protein 4 precursor; n=31; Euteleostomi|Rep: Low-density
            lipoprotein receptor-related protein 4 precursor - Homo
            sapiens (Human)
          Length = 1950

 Score = 35.5 bits (78), Expect = 2.9
 Identities = 24/72 (33%), Positives = 38/72 (52%)
 Frame = +1

Query: 319  LSWLIGGVCGVFILLVIICYCRLMPRHQKSLDEQYLKENYTIKENHAYSNQDNYRMKHAE 498
            +S+ IGG+  + ++LV+I    L  RH+KS        N T      YSN  +YR    E
Sbjct: 1769 ISYAIGGLLSILLILVVIAALMLY-RHKKSKFTDPGMGNLT------YSNP-SYRTSTQE 1820

Query: 499  VQVQRVSRPASY 534
            V+++ + +PA Y
Sbjct: 1821 VKIEAIPKPAMY 1832


>UniRef50_Q7NBJ1 Cluster: SufC; n=1; Mycoplasma gallisepticum|Rep:
           SufC - Mycoplasma gallisepticum
          Length = 268

 Score = 35.1 bits (77), Expect = 3.8
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = +1

Query: 655 SMLDEIDSGASVDALK--TRSLPAFLRPKPRPLSTEDDLQQLYAKVSLSKKY 804
           +MLDEIDSG  VDALK  T+ L  +++ K + L      ++++  +  +K +
Sbjct: 165 AMLDEIDSGLDVDALKIITKELQEWIKDKSKSLIIVSHYERMFKLIKPTKVF 216


>UniRef50_Q0RQP7 Cluster: Putative uncharacterized protein; n=1;
           Frankia alni ACN14a|Rep: Putative uncharacterized
           protein - Frankia alni (strain ACN14a)
          Length = 549

 Score = 34.7 bits (76), Expect = 5.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +2

Query: 554 GGRSPPTAT*TGSRPGRPPRCLRSRTTARSTPPAP 658
           G R+PPT T       RPPR +R    A S P AP
Sbjct: 478 GSRTPPTETAAAGAAHRPPRSVRPAPAAASPPAAP 512


>UniRef50_Q9TVF3 Cluster: Calcium-binding protein Sj66; n=5;
           Schistosoma|Rep: Calcium-binding protein Sj66 -
           Schistosoma japonicum (Blood fluke)
          Length = 582

 Score = 34.7 bits (76), Expect = 5.0
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +1

Query: 316 WLSWLIGGVCGVFILLVIICYCRLMPRHQKSLDEQYLKENYTIKENHAYSNQDNYRMKHA 495
           WL  ++G VC + ILL  I +CR   +H + +      + +T  ++H++ N+ N   +  
Sbjct: 464 WLIVVVGLVCTLPILLCCIYFCRSPSKH-RDISMHKKTDTFTPDDSHSHFNEKNAENEEL 522

Query: 496 E 498
           E
Sbjct: 523 E 523


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,093,209
Number of Sequences: 1657284
Number of extensions: 14435386
Number of successful extensions: 60265
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 46220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57411
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 125530395290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)