Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M09
         (1242 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   3.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   3.6  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   8.3  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 784 VSLSKKYKNRMRNEHAAIIALSKSHSQFLXADAVIVYD 897
           + LS  +  RM+     I AL KSH     A A++ Y+
Sbjct: 543 ILLSMAFATRMKQSRTKIEALVKSH----IAGAIVTYE 576


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 433 NYTIKENHAYSNQDNYR 483
           N+  + N AYSN +NY+
Sbjct: 212 NFNYQYNQAYSNYNNYQ 228


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 433 NYTIKENHAYSNQDNYR 483
           N+  + N AYSN +NY+
Sbjct: 232 NFNYQYNQAYSNYNNYQ 248


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 382 RLMPRHQKSLDEQYLKENYTIKENHAY 462
           +  P  +K    +YL EN   + N+AY
Sbjct: 97  KYFPEPEKFDPNRYLPENQAKRHNYAY 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,649
Number of Sequences: 336
Number of extensions: 3593
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36377394
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)