Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M09
         (1242 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2071|AAF58129.1| 1921|Drosophila melanogaster CG8183-PB...    29   10.0 
AE013599-2070|AAM70975.1| 1921|Drosophila melanogaster CG8183-PA...    29   10.0 

>AE013599-2071|AAF58129.1| 1921|Drosophila melanogaster CG8183-PB,
            isoform B protein.
          Length = 1921

 Score = 29.5 bits (63), Expect = 10.0
 Identities = 18/86 (20%), Positives = 36/86 (41%)
 Frame = +1

Query: 631  HSTQYASSSMLDEIDSGASVDALKTRSLPAFLRPKPRPLSTEDDLQQLYAKVSLSKKYKN 810
            H  +   SS   + D        K  +    L  +P+PLS++ DL++  ++     ++  
Sbjct: 1639 HPLEQLESSQNAQSDDDECAQLPKNNNNNLDLVNEPKPLSSQTDLEESMSQPKSKTEFAT 1698

Query: 811  RMRNEHAAIIALSKSHSQFLXADAVI 888
              +N + +   LS S    L  D ++
Sbjct: 1699 DNQNGNRSSDELSHSSEDLLEGDGIV 1724


>AE013599-2070|AAM70975.1| 1921|Drosophila melanogaster CG8183-PA,
            isoform A protein.
          Length = 1921

 Score = 29.5 bits (63), Expect = 10.0
 Identities = 18/86 (20%), Positives = 36/86 (41%)
 Frame = +1

Query: 631  HSTQYASSSMLDEIDSGASVDALKTRSLPAFLRPKPRPLSTEDDLQQLYAKVSLSKKYKN 810
            H  +   SS   + D        K  +    L  +P+PLS++ DL++  ++     ++  
Sbjct: 1639 HPLEQLESSQNAQSDDDECAQLPKNNNNNLDLVNEPKPLSSQTDLEESMSQPKSKTEFAT 1698

Query: 811  RMRNEHAAIIALSKSHSQFLXADAVI 888
              +N + +   LS S    L  D ++
Sbjct: 1699 DNQNGNRSSDELSHSSEDLLEGDGIV 1724


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,011,089
Number of Sequences: 53049
Number of extensions: 726525
Number of successful extensions: 4090
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3850
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6641632230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)