Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M06
         (1267 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   1.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   4.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   6.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   8.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 66   QLFTSKSGFXNNFSFPDNFTSLFSIKSFVCSH 161
            Q+   ++GF     FP ++TS FS +  V  H
Sbjct: 963  QILNERAGFTAAGFFPIDYTSAFSSEKIVWLH 994


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 785 MMMVTTELKMFFFTI 829
           +M+VT +L +FFFT+
Sbjct: 111 VMVVTVDLHVFFFTL 125


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 928 HIVXXXIYKTXYYHHXKTLNLVYY 857
           + +   ++++ Y H   TL  VYY
Sbjct: 298 YFIIFQVFESFYLHKATTLETVYY 321


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = -1

Query: 238 VNXXVTRANSQGMWNNLGSLENTIDLWEHTKDLMEKSEVKLSGNEK 101
           V+  +T      +  NLG  E  I +W   +   E+ + K    EK
Sbjct: 178 VSKYITIKRKSELAENLGLSERQIKIWFQNRRAKERKQNKKRIEEK 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,386
Number of Sequences: 336
Number of extensions: 3101
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37199482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)