Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M06
         (1267 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0179 - 17604561-17606435                                         30   3.4  
01_01_1129 - 8948612-8950117,8951354-8951503                           29   5.9  
03_02_0738 - 10824121-10825572                                         29   7.8  

>06_03_0179 - 17604561-17606435
          Length = 624

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 449 VVLHIHQQVSNILQPVHSILRLVQAILLHH 538
           VVL IHQ  S +L  V S+L L +  ++HH
Sbjct: 248 VVLSIHQPSSRLLSAVDSLLLLSRGAVVHH 277


>01_01_1129 - 8948612-8950117,8951354-8951503
          Length = 551

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -1

Query: 289 ETKANNLMK*DCRQDYLVNXXVTRANSQGMWNNLGSLENTID-LWEHTKDLMEKSEVKLS 113
           E K N+ M+ D  +       V+R+       + G + N  +     +KD  EK+    S
Sbjct: 96  EEKGNDEMRVDASESIESIEPVSRSTLDNKKEDQGQMNNVEEKAASDSKDENEKTANDES 155

Query: 112 GNEKLLXKPDLLV 74
           G +K+L KPD ++
Sbjct: 156 GQDKVLKKPDKIL 168


>03_02_0738 - 10824121-10825572
          Length = 483

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 1210 PPXXFXXPPPPXXXPPP 1160
            PP  F  PPPP   PPP
Sbjct: 89   PPLSFPPPPPPPSSPPP 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,234,102
Number of Sequences: 37544
Number of extensions: 328068
Number of successful extensions: 3948
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2922
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3922562724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)