Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M06
         (1267 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080445-1|AAD29853.1|  179|Drosophila melanogaster pugilistDomi...    45   3e-04
AF080444-1|AAD29852.1|  268|Drosophila melanogaster pugilistDomi...    44   3e-04

>AF080445-1|AAD29853.1|  179|Drosophila melanogaster
           pugilistDominant protein.
          Length = 179

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
 Frame = +3

Query: 36  TSLXSXPXISQLFTSKSGFXNNFSFPDNFTSLFSIKSFVCSHKSIVFSNEPRLFHIPWLF 215
           +SL     +  L +  S   +       F+ L S  S + S  S++ S    L     LF
Sbjct: 12  SSLSLXSRLXSLVSLLSSLFSXLGSRSXFSXLCSXFSXLXSXFSVLXSXXSVLCS---LF 68

Query: 216 ALVTXXFTK*SCLQSYFIKLFAFV-SKLHFWICLFTYESYIFTYFSLIFSIITELFAVFS 392
           + +   F+    L S    LF+ + S       LF+    +F+    +FS++  LF+V S
Sbjct: 69  SXLXSXFSVLCSLFSXLCSLFSXLXSXFSVLXSLFSVLCSLFSVLCSLFSVLXSLFSVLS 128

Query: 393 KLFTLVTELFSYFALCGWR*SYIFTNKSAIFSNQSTVF 506
            LF+L++ LFS  +      S +F+  S++FS  S++F
Sbjct: 129 SLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLF 166



 Score = 42.3 bits (95), Expect = 0.001
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = +3

Query: 252 LQSYFIKLFAFVSKLHFWIC-LFTYESYIFTYFSLIFSIITELFAVFSKLFTLVTELFSY 428
           L S     F+ +  L   +C LF+     F+    +FS++  LF+V   LF+++  LFS 
Sbjct: 67  LFSXLXSXFSVLCSLFSXLCSLFSXLXSXFSVLXSLFSVLCSLFSVLCSLFSVLXSLFSV 126

Query: 429 FALCGWR*SYIFTNKSAIFSNQSTVFSD*SRLFFYITT 542
            +      S +F+  S++FS  S++FS  S LF  +++
Sbjct: 127 LSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSS 164


>AF080444-1|AAD29852.1|  268|Drosophila melanogaster
           pugilistDominant protein.
          Length = 268

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 24/66 (36%), Positives = 42/66 (63%)
 Frame = +3

Query: 312 LFTYESYIFTYFSLIFSIITELFAVFSKLFTLVTELFSYFALCGWR*SYIFTNKSAIFSN 491
           LF+  S +F+  S +FS+++ LF++ S LF+L++ LFS  +      S +F+  S +FS 
Sbjct: 185 LFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSXLFSL 244

Query: 492 QSTVFS 509
            S++FS
Sbjct: 245 LSSLFS 250



 Score = 43.6 bits (98), Expect = 6e-04
 Identities = 25/67 (37%), Positives = 42/67 (62%)
 Frame = +3

Query: 327 SYIFTYFSLIFSIITELFAVFSKLFTLVTELFSYFALCGWR*SYIFTNKSAIFSNQSTVF 506
           S +F+  S +FS+++ LF++ S LF+L++ LFS  +      S +F+  S++FS  S +F
Sbjct: 183 SSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSXLF 242

Query: 507 SD*SRLF 527
           S  S LF
Sbjct: 243 SLLSSLF 249



 Score = 40.7 bits (91), Expect = 0.004
 Identities = 23/65 (35%), Positives = 42/65 (64%)
 Frame = +3

Query: 348 SLIFSIITELFAVFSKLFTLVTELFSYFALCGWR*SYIFTNKSAIFSNQSTVFSD*SRLF 527
           S +FS+++ LF++ S LF+L++ LFS  +      S +F+  S++FS  S++FS  S LF
Sbjct: 183 SSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSXLF 242

Query: 528 FYITT 542
             +++
Sbjct: 243 SLLSS 247



 Score = 33.9 bits (74), Expect = 0.47
 Identities = 20/54 (37%), Positives = 34/54 (62%)
 Frame = +3

Query: 366 ITELFAVFSKLFTLVTELFSYFALCGWR*SYIFTNKSAIFSNQSTVFSD*SRLF 527
           ++ LF++ S LF+L++ LFS  +      S +F+  S++FS  S++FS  S LF
Sbjct: 182 LSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLF 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,038,830
Number of Sequences: 53049
Number of extensions: 549373
Number of successful extensions: 4604
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3673
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6804617070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)