Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M06
         (1267 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016446-7|AAC24174.1|  330|Caenorhabditis elegans Serpentine re...    31   2.3  
Z68119-2|CAA92192.1|  457|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U16708-1|AAC46497.1|  457|Caenorhabditis elegans odr-7 protein.        29   5.3  
AF016435-3|AAB65879.1|  438|Caenorhabditis elegans Hypothetical ...    29   7.0  
U64836-8|AAG24063.1|  339|Caenorhabditis elegans Serpentine rece...    29   9.2  

>AF016446-7|AAC24174.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein21 protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 312 LFTYESYIFTYFSLIFSIITELFAVFSKLFTLVT 413
           L +Y+ + FTYF       T  FA+F  +F +VT
Sbjct: 120 LVSYKDHYFTYFLRFLVYSTRCFAIFDFIFPIVT 153


>Z68119-2|CAA92192.1|  457|Caenorhabditis elegans Hypothetical
           protein T18D3.2 protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +3

Query: 6   TSPLLGXFFQTSLXSXPXISQLFTSKSGFXNNFSFPDNFTSLFSIKSFVCS---HKSIVF 176
           T+P +  FF       P  ++ +   +GF  N  FP+ F S F+ ++F  S   H S+  
Sbjct: 100 TAPFMTHFFPRIGLQFPDFTE-YQRFNGFQRNAFFPNPFGSQFTGQAFAQSFPLHNSMTT 158

Query: 177 SNEPRLFHIPWLFALVT 227
            +   L H P  F+  T
Sbjct: 159 MDGFNLTHAPHPFSTNT 175


>U16708-1|AAC46497.1|  457|Caenorhabditis elegans odr-7 protein.
          Length = 457

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +3

Query: 6   TSPLLGXFFQTSLXSXPXISQLFTSKSGFXNNFSFPDNFTSLFSIKSFVCS---HKSIVF 176
           T+P +  FF       P  ++ +   +GF  N  FP+ F S F+ ++F  S   H S+  
Sbjct: 100 TAPFMTHFFPRIGLQFPDFTE-YQRFNGFQRNAFFPNPFGSQFTGQAFAQSFPLHNSMTT 158

Query: 177 SNEPRLFHIPWLFALVT 227
            +   L H P  F+  T
Sbjct: 159 MDGFNLTHAPHPFSTNT 175


>AF016435-3|AAB65879.1|  438|Caenorhabditis elegans Hypothetical
           protein F59D6.4 protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 21/75 (28%), Positives = 31/75 (41%)
 Frame = -1

Query: 304 QKCNLETKANNLMK*DCRQDYLVNXXVTRANSQGMWNNLGSLENTIDLWEHTKDLMEKSE 125
           Q+C+ + K N L+K DC   YL     ++    G   N G     I++   TK+      
Sbjct: 64  QECDFQIKNNPLLKVDCEDRYL--SEYSKIEVSGNLENCGCKGGEIEI--STKNQFANCS 119

Query: 124 VKLSGNEKLLXKPDL 80
           V   G +     PDL
Sbjct: 120 VLYGGLQIFNKTPDL 134


>U64836-8|AAG24063.1|  339|Caenorhabditis elegans Serpentine
           receptor, class h protein187 protein.
          Length = 339

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
 Frame = +3

Query: 234 FTK*SCLQSYFIKLFAFVSK----LHFWICLF---TYESYIFTYFSLI 356
           F K  CL S F K+  FV       HFW C F   T  + +FT+   I
Sbjct: 172 FKKLPCLPSNFYKVSMFVLAEDYTYHFWACFFIFSTTSTEVFTFVCFI 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,142,303
Number of Sequences: 27780
Number of extensions: 262659
Number of successful extensions: 1866
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3526846804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)