Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_M02
         (1242 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p pro...   272   9e-73
AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p pro...   272   9e-73
AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB...   271   1e-72
AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA...   271   1e-72
X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal prot...   268   1e-71
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P...    32   1.9  

>BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p
           protein.
          Length = 208

 Score =  272 bits (666), Expect = 9e-73
 Identities = 135/201 (67%), Positives = 145/201 (72%)
 Frame = +3

Query: 60  VXRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAV 239
           V  MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV V
Sbjct: 3   VDSMSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVV 62

Query: 240 HSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDR 419
           HSR RVRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDR
Sbjct: 63  HSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDR 122

Query: 420 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXX 599
           HLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                   
Sbjct: 123 HLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERI 182

Query: 600 XXXXXXLLQTFAREDEAALTA 662
                 L+   A+EDE A  A
Sbjct: 183 ATKKQELIALHAKEDEIAAKA 203


>AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p
           protein.
          Length = 221

 Score =  272 bits (666), Expect = 9e-73
 Identities = 135/201 (67%), Positives = 145/201 (72%)
 Frame = +3

Query: 60  VXRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAV 239
           V  MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV V
Sbjct: 16  VDSMSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVV 75

Query: 240 HSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDR 419
           HSR RVRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDR
Sbjct: 76  HSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDR 135

Query: 420 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXX 599
           HLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                   
Sbjct: 136 HLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERI 195

Query: 600 XXXXXXLLQTFAREDEAALTA 662
                 L+   A+EDE A  A
Sbjct: 196 ATKKQELIALHAKEDEIAAKA 216


>AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB,
           isoform B protein.
          Length = 203

 Score =  271 bits (664), Expect = 1e-72
 Identities = 134/198 (67%), Positives = 144/198 (72%)
 Frame = +3

Query: 69  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 248
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 249 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 428
            RVRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLY
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 429 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 608
           H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                      
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180

Query: 609 XXXLLQTFAREDEAALTA 662
              L+   A+EDE A  A
Sbjct: 181 KQELIALHAKEDEIAAKA 198


>AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA,
           isoform A protein.
          Length = 203

 Score =  271 bits (664), Expect = 1e-72
 Identities = 134/198 (67%), Positives = 144/198 (72%)
 Frame = +3

Query: 69  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 248
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 249 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 428
            RVRKNTEARRKGRHCGFGKR+GTANARMP K LW                +KKIDRHLY
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 429 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 608
           H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                      
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180

Query: 609 XXXLLQTFAREDEAALTA 662
              L+   A+EDE A  A
Sbjct: 181 KQELIALHAKEDEIAAKA 198


>X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal protein
           L19 protein.
          Length = 203

 Score =  268 bits (657), Expect = 1e-71
 Identities = 133/198 (67%), Positives = 143/198 (72%)
 Frame = +3

Query: 69  MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 248
           MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 249 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 428
            RVRKNTEARRK RHCGFGKR+GTANARMP K LW                +KKIDRHLY
Sbjct: 61  YRVRKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLY 120

Query: 429 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 608
           H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                      
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180

Query: 609 XXXLLQTFAREDEAALTA 662
              L+   A+EDE A  A
Sbjct: 181 KQELIALHAKEDEIAAKA 198


>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
            protein.
          Length = 1718

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -3

Query: 490  YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSFCGIRALAV 317
            YS++   +L  L        +YR    FL   +++ NF  TLC C +S FCG  A  V
Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSAQTV 1376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,221,490
Number of Sequences: 53049
Number of extensions: 814627
Number of successful extensions: 2092
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2087
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6641632230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)